RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 HIRIP3Q9BW71 556 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 ROCK2O75116 1388 aaKnown RBP7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 J3QL48 77 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 ZBTB24O43167 697 aaPredicted RBP7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 CD46P15529 392 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 SCUBE3Q8IX30 993 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 HPS1Q92902 700 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 E9PCH4 1651 aa7.86□□□□□ -1.15
SNRPA1-209ENST00000560307 ABCA10Q8WWZ4 1543 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 NEFMP07197 916 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 NDUFV2P19404 249 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 DNAJB2P25686 324 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 RSBN1LQ6PCB5 846 aaPredicted RBP7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 RDH13Q8NBN7 331 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 RETREG2Q8NC44 543 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 FHOD3Q2V2M9 1422 aa7.85□□□□□ -1.15
SNRPA1-209ENST00000560307 MTUS2Q5JR59 1369 aa7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 MBD5Q9P267 1494 aa7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 SPTLC1O15269 473 aa7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 GSK3AP49840 483 aa7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 QPCTQ16769 361 aa7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 TBC1D2BQ9UPU7 963 aa7.84□□□□□ -1.15
SNRPA1-209ENST00000560307 LRPPRCP42704 1394 aaKnown RBP7.84□□□□□ -1.16
SNRPA1-209ENST00000560307 VIRMAQ69YN4 1812 aaKnown RBP7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 WNT7AO00755 349 aa7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 FAM43AQ8N2R8 423 aa7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 BACH2Q9BYV9 841 aa7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 KDM5CP41229 1560 aa7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 DNMBPQ6XZF7 1577 aa7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 ROCK1Q13464 1354 aa7.83□□□□□ -1.16
SNRPA1-209ENST00000560307 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 RASSF7Q02833 373 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 CCDC184Q52MB2 194 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 FAM9BQ8IZU0 186 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 GLMNQ92990 594 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 PCDHB15Q9Y5E8 787 aa7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 BRD4O60885 1362 aaPredicted RBP7.82□□□□□ -1.16
SNRPA1-209ENST00000560307 KIF7Q2M1P5 1343 aa7.81□□□□□ -1.16
SNRPA1-209ENST00000560307 USP17L8P0C7I0 530 aa7.81□□□□□ -1.16
SNRPA1-209ENST00000560307 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
SNRPA1-209ENST00000560307 CABLES1Q8TDN4 633 aa7.81□□□□□ -1.16
SNRPA1-209ENST00000560307 MRGPRX2Q96LB1 330 aa7.81□□□□□ -1.16
SNRPA1-209ENST00000560307 DNMT1P26358 1616 aaKnown RBP7.81□□□□□ -1.16
SNRPA1-209ENST00000560307 ADGBQ8N7X0 1667 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 LILRB3O75022 631 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 GPAT2Q6NUI2 795 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 TMEM134Q9H6X4 195 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 KDM6BO15054 1643 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 ANKRD30BQ9BXX2 1392 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 BCORL1Q5H9F3 1711 aa7.8□□□□□ -1.16
SNRPA1-209ENST00000560307 BMP1P13497 986 aa7.79□□□□□ -1.16
SNRPA1-209ENST00000560307 RFX1P22670 979 aa7.79□□□□□ -1.16
SNRPA1-209ENST00000560307 GLIPR1L2Q4G1C9 344 aa7.79□□□□□ -1.16
SNRPA1-209ENST00000560307 TSC1Q92574 1164 aa7.79□□□□□ -1.16
SNRPA1-209ENST00000560307 UHRF1BP1Q6BDS2 1440 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 ARHGEF12Q9NZN5 1544 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 KDM4AO75164 1064 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 KIF15Q9NS87 1388 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 GAPVD1Q14C86 1478 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 RALGAPBQ86X10 1494 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 NESP48681 1621 aa7.78□□□□□ -1.16
SNRPA1-209ENST00000560307 ZBTB3Q9H5J0 574 aa7.77□□□□□ -1.17
SNRPA1-209ENST00000560307 NDUFB9Q9Y6M9 179 aa7.77□□□□□ -1.17
SNRPA1-209ENST00000560307 SLC10A3P09131 477 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 FDX1P10109 184 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 IRF5Q13568 498 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 NFKBIBQ15653 356 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 RSPH4AQ5TD94 716 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 HDGFL1Q5TGJ6 251 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 PNISRQ8TF01 805 aaKnown RBP7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 L3MBTL2Q969R5 705 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 GZF1Q9H116 711 aaPredicted RBP7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 CCDC144AA2RUR9 1427 aa7.76□□□□□ -1.17
SNRPA1-209ENST00000560307 LAMC1P11047 1609 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 CADPSQ9ULU8 1353 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 MAGI3Q5TCQ9 1506 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 GJA5P36382 358 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 RALBP1Q15311 655 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 MPHOSPH9Q99550 1183 aa7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 LAS1LQ9Y4W2 734 aaKnown RBP7.75□□□□□ -1.17
SNRPA1-209ENST00000560307 CROCC2H7BZ55 1655 aa7.74□□□□□ -1.17
SNRPA1-209ENST00000560307 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
SNRPA1-209ENST00000560307 PRDM9Q9NQV7 894 aa7.74□□□□□ -1.17
SNRPA1-209ENST00000560307 MYBBP1AQ9BQG0 1328 aaKnown RBP7.74□□□□□ -1.17
SNRPA1-209ENST00000560307 ITSN2Q9NZM3 1697 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 CLASP1Q7Z460 1538 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 DAPK1P53355 1430 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms