RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
RORA-207ENST00000558234 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
RORA-207ENST00000558234 TRPC5Q9UL62 973 aaPredicted RBP15.37■□□□□ 0.05
RORA-207ENST00000558234 AEBP1Q8IUX7 1158 aa15.37■□□□□ 0.05
RORA-207ENST00000558234 KDM6AO15550 1401 aaPredicted RBP15.36■□□□□ 0.05
RORA-207ENST00000558234 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
RORA-207ENST00000558234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.36■□□□□ 0.05
RORA-207ENST00000558234 TCP11L2Q8N4U5 519 aa15.35■□□□□ 0.05
RORA-207ENST00000558234 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
RORA-207ENST00000558234 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
RORA-207ENST00000558234 TJP1Q07157 1748 aa15.35■□□□□ 0.05
RORA-207ENST00000558234 TAF1LQ8IZX4 1826 aa15.35■□□□□ 0.05
RORA-207ENST00000558234 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
RORA-207ENST00000558234 FCHSD2O94868 740 aa15.34■□□□□ 0.05
RORA-207ENST00000558234 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.05
RORA-207ENST00000558234 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.05
RORA-207ENST00000558234 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
RORA-207ENST00000558234 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
RORA-207ENST00000558234 C5P01031 1676 aa15.33■□□□□ 0.04
RORA-207ENST00000558234 QSER1Q2KHR3 1735 aa15.32■□□□□ 0.04
RORA-207ENST00000558234 CDCA7Q9BWT1 371 aaPredicted RBP15.32■□□□□ 0.04
RORA-207ENST00000558234 HAP1P54257 671 aaPredicted RBP15.31■□□□□ 0.04
RORA-207ENST00000558234 HNRNPUQ00839 825 aaKnown RBP eCLIP15.31■□□□□ 0.04
RORA-207ENST00000558234 MEX3CQ5U5Q3 659 aaKnown RBP15.31■□□□□ 0.04
RORA-207ENST00000558234 USHBP1Q8N6Y0 703 aa15.31■□□□□ 0.04
RORA-207ENST00000558234 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
RORA-207ENST00000558234 RBM6P78332 1123 aaKnown RBP15.31■□□□□ 0.04
RORA-207ENST00000558234 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
RORA-207ENST00000558234 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
RORA-207ENST00000558234 KCPQ6ZWJ8 1503 aa15.3■□□□□ 0.04
RORA-207ENST00000558234 NUP188Q5SRE5 1749 aa15.29■□□□□ 0.04
RORA-207ENST00000558234 IL2RBP14784 551 aa15.29■□□□□ 0.04
RORA-207ENST00000558234 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
RORA-207ENST00000558234 STRN4Q9NRL3 753 aa15.29■□□□□ 0.04
RORA-207ENST00000558234 TOM1L2Q6ZVM7 507 aa15.28■□□□□ 0.04
RORA-207ENST00000558234 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
RORA-207ENST00000558234 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
RORA-207ENST00000558234 CYP27B1O15528 508 aa15.28■□□□□ 0.04
RORA-207ENST00000558234 TUBGCP6Q96RT7 1819 aa15.27■□□□□ 0.04
RORA-207ENST00000558234 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.03
RORA-207ENST00000558234 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
RORA-207ENST00000558234 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
RORA-207ENST00000558234 NLRP2Q9NX02 1062 aa15.26■□□□□ 0.03
RORA-207ENST00000558234 EVA1CP58658 441 aa15.25■□□□□ 0.03
RORA-207ENST00000558234 MARCH10Q8NA82 808 aaPredicted RBP15.25■□□□□ 0.03
RORA-207ENST00000558234 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
RORA-207ENST00000558234 CCDC27Q2M243 656 aa15.25■□□□□ 0.03
RORA-207ENST00000558234 HMOX1P09601 288 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 PHKG2P15735 406 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 FAM98CQ17RN3 349 aaKnown RBP15.24■□□□□ 0.03
RORA-207ENST00000558234 RUNDC1Q96C34 613 aa15.24■□□□□ 0.03
RORA-207ENST00000558234 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
RORA-207ENST00000558234 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
RORA-207ENST00000558234 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
RORA-207ENST00000558234 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
RORA-207ENST00000558234 RXRBP28702 533 aa15.22■□□□□ 0.03
RORA-207ENST00000558234 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.03
RORA-207ENST00000558234 HTATSF1O43719 755 aaKnown RBP15.22■□□□□ 0.03
RORA-207ENST00000558234 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.03
RORA-207ENST00000558234 NFE2L2Q16236 605 aa15.21■□□□□ 0.03
RORA-207ENST00000558234 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.03
RORA-207ENST00000558234 PDE3BQ13370 1112 aa15.21■□□□□ 0.02
RORA-207ENST00000558234 AKAP4Q5JQC9 854 aa15.21■□□□□ 0.02
RORA-207ENST00000558234 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.02
RORA-207ENST00000558234 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
RORA-207ENST00000558234 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
RORA-207ENST00000558234 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
RORA-207ENST00000558234 GTF3C3Q9Y5Q9 886 aa15.2■□□□□ 0.02
RORA-207ENST00000558234 U2SURPO15042 1029 aaKnown RBP15.19■□□□□ 0.02
RORA-207ENST00000558234 NGEFQ8N5V2 710 aa15.19■□□□□ 0.02
RORA-207ENST00000558234 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
RORA-207ENST00000558234 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
RORA-207ENST00000558234 ZNF853P0CG23 659 aa15.17■□□□□ 0.02
RORA-207ENST00000558234 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
RORA-207ENST00000558234 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
RORA-207ENST00000558234 BCORQ6W2J9 1755 aa15.17■□□□□ 0.02
RORA-207ENST00000558234 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
RORA-207ENST00000558234 PNNQ9H307 717 aaKnown RBP15.17■□□□□ 0.02
RORA-207ENST00000558234 DDB1Q16531 1140 aa15.17■□□□□ 0.02
RORA-207ENST00000558234 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
RORA-207ENST00000558234 C4AP0C0L4 1744 aa15.16■□□□□ 0.02
RORA-207ENST00000558234 C4BP0C0L5 1744 aa15.16■□□□□ 0.02
RORA-207ENST00000558234 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
RORA-207ENST00000558234 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
RORA-207ENST00000558234 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
RORA-207ENST00000558234 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
RORA-207ENST00000558234 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
RORA-207ENST00000558234 CASZ1Q86V15 1759 aa15.15■□□□□ 0.02
RORA-207ENST00000558234 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
RORA-207ENST00000558234 DCAF5Q96JK2 942 aa15.14■□□□□ 0.01
RORA-207ENST00000558234 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
RORA-207ENST00000558234 CACNA1FO60840 1977 aa15.14■□□□□ 0.01
RORA-207ENST00000558234 MYH14Q7Z406 1995 aaKnown RBP15.14■□□□□ 0.01
RORA-207ENST00000558234 EXOC5O00471 708 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms