RNA–Protein interactions for RNA: ENST00000557822.5

RORA-206, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-206ENST00000557822 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.13
RORA-206ENST00000557822 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
RORA-206ENST00000557822 DDX54Q8TDD1 881 aaKnown RBP22.14■■□□□ 1.13
RORA-206ENST00000557822 ANKRD24Q8TF21 1146 aa22.13■■□□□ 1.13
RORA-206ENST00000557822 SYTL4Q96C24 671 aaPredicted RBP22.13■■□□□ 1.13
RORA-206ENST00000557822 KLRG1Q96E93 195 aa22.13■■□□□ 1.13
RORA-206ENST00000557822 NSD2O96028 1365 aa22.12■■□□□ 1.13
RORA-206ENST00000557822 IGSF1Q8N6C5 1336 aa22.12■■□□□ 1.13
RORA-206ENST00000557822 USP31Q70CQ4 1352 aa22.11■■□□□ 1.13
RORA-206ENST00000557822 EVC2Q86UK5 1308 aa22.1■■□□□ 1.13
RORA-206ENST00000557822 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
RORA-206ENST00000557822 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
RORA-206ENST00000557822 RAB3GAP2Q9H2M9 1393 aa22.08■■□□□ 1.12
RORA-206ENST00000557822 RBM46Q8TBY0 533 aaKnown RBP22.07■■□□□ 1.12
RORA-206ENST00000557822 USP47Q96K76 1375 aa22.07■■□□□ 1.12
RORA-206ENST00000557822 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
RORA-206ENST00000557822 DOT1LQ8TEK3 1739 aa22.04■■□□□ 1.12
RORA-206ENST00000557822 USP54Q70EL1 1684 aa22.04■■□□□ 1.12
RORA-206ENST00000557822 FSTL1Q12841 308 aa22.02■■□□□ 1.12
RORA-206ENST00000557822 WWC3Q9ULE0 1092 aa22.01■■□□□ 1.11
RORA-206ENST00000557822 LTN1O94822 1766 aa22.01■■□□□ 1.11
RORA-206ENST00000557822 SLC34A2O95436 690 aa22■■□□□ 1.11
RORA-206ENST00000557822 ZCRB1Q8TBF4 217 aaKnown RBP22■■□□□ 1.11
RORA-206ENST00000557822 NMRK2Q9NPI5 230 aa22■■□□□ 1.11
RORA-206ENST00000557822 C5P01031 1676 aa21.99■■□□□ 1.11
RORA-206ENST00000557822 HTRA3P83110 453 aa21.99■■□□□ 1.11
RORA-206ENST00000557822 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
RORA-206ENST00000557822 IP6K1Q92551 441 aa21.98■■□□□ 1.11
RORA-206ENST00000557822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.97■■□□□ 1.11
RORA-206ENST00000557822 C16orf71Q8IYS4 520 aaPredicted RBP21.97■■□□□ 1.11
RORA-206ENST00000557822 NME9Q86XW9 330 aa21.96■■□□□ 1.11
RORA-206ENST00000557822 MON2Q7Z3U7 1717 aa21.96■■□□□ 1.11
RORA-206ENST00000557822 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
RORA-206ENST00000557822 AK7Q96M32 723 aa21.93■■□□□ 1.1
RORA-206ENST00000557822 SBNO2Q9Y2G9 1366 aa21.93■■□□□ 1.1
RORA-206ENST00000557822 PALLDQ8WX93 1383 aa21.92■■□□□ 1.1
RORA-206ENST00000557822 PLEKHG2Q9H7P9 1386 aa21.91■■□□□ 1.1
RORA-206ENST00000557822 LTV1Q96GA3 475 aaPredicted RBP21.91■■□□□ 1.1
RORA-206ENST00000557822 TAF1LQ8IZX4 1826 aa21.91■■□□□ 1.1
RORA-206ENST00000557822 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 C10orf71Q711Q0 1435 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 C4BP0C0L5 1744 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.9■■□□□ 1.1
RORA-206ENST00000557822 SSFA2P28290 1259 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 TGFB2P61812 414 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 MEGF6O75095 1541 aa21.9■■□□□ 1.1
RORA-206ENST00000557822 ARHGAP27Q6ZUM4 889 aa21.89■■□□□ 1.09
RORA-206ENST00000557822 BCS1LQ9Y276 419 aa21.88■■□□□ 1.09
RORA-206ENST00000557822 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
RORA-206ENST00000557822 HSPA1AP0DMV8 641 aaKnown RBP21.87■■□□□ 1.09
RORA-206ENST00000557822 HSPA1BP0DMV9 641 aaKnown RBP21.87■■□□□ 1.09
RORA-206ENST00000557822 SMARCC1Q92922 1105 aaPredicted RBP21.87■■□□□ 1.09
RORA-206ENST00000557822 CD163L1Q9NR16 1453 aa21.87■■□□□ 1.09
RORA-206ENST00000557822 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
RORA-206ENST00000557822 PHF14O94880 888 aa21.86■■□□□ 1.09
RORA-206ENST00000557822 EDC4Q6P2E9 1401 aaKnown RBP21.86■■□□□ 1.09
RORA-206ENST00000557822 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
RORA-206ENST00000557822 C9orf131Q5VYM1 1079 aa21.84■■□□□ 1.09
RORA-206ENST00000557822 HDGFL2Q7Z4V5 671 aaPredicted RBP21.84■■□□□ 1.09
RORA-206ENST00000557822 SMC1BQ8NDV3 1235 aa21.84■■□□□ 1.09
RORA-206ENST00000557822 KIF13BQ9NQT8 1826 aa21.84■■□□□ 1.09
RORA-206ENST00000557822 HOXC9P31274 260 aa21.83■■□□□ 1.09
RORA-206ENST00000557822 KIAA1551Q9HCM1 1747 aa21.83■■□□□ 1.08
RORA-206ENST00000557822 MMP10P09238 476 aa21.82■■□□□ 1.08
RORA-206ENST00000557822 A0A0G2JLW4 131 aa21.81■■□□□ 1.08
RORA-206ENST00000557822 MPRIPQ6WCQ1 1025 aa21.81■■□□□ 1.08
RORA-206ENST00000557822 SMIM5Q71RC9 77 aa21.81■■□□□ 1.08
RORA-206ENST00000557822 FCHSD2O94868 740 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 RAPGEF4Q8WZA2 1011 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 PCDH10Q9P2E7 1040 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
RORA-206ENST00000557822 RRAGCQ9HB90 399 aa21.79■■□□□ 1.08
RORA-206ENST00000557822 AMPHP49418 695 aa21.78■■□□□ 1.08
RORA-206ENST00000557822 NBPF6Q5VWK0 638 aa21.77■■□□□ 1.08
RORA-206ENST00000557822 NBPF4Q96M43 638 aa21.77■■□□□ 1.08
RORA-206ENST00000557822 N4BP2Q86UW6 1770 aaPredicted RBP21.76■■□□□ 1.07
RORA-206ENST00000557822 DPEP1P16444 411 aa21.76■■□□□ 1.07
RORA-206ENST00000557822 TATP17735 454 aaPredicted RBP21.76■■□□□ 1.07
RORA-206ENST00000557822 LINC00116Q8NCU8 138 aa21.76■■□□□ 1.07
RORA-206ENST00000557822 TERF2IPQ9NYB0 399 aa21.76■■□□□ 1.07
RORA-206ENST00000557822 TNRC6CQ9HCJ0 1690 aaKnown RBP21.75■■□□□ 1.07
RORA-206ENST00000557822 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
RORA-206ENST00000557822 TMC1Q8TDI8 760 aa21.75■■□□□ 1.07
RORA-206ENST00000557822 PKD1L3Q7Z443 1732 aa21.75■■□□□ 1.07
RORA-206ENST00000557822 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 LOC102724428A0A0B4J2F2 783 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 GNPATO15228 680 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 SIK1P57059 783 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 CCDC87Q9NVE4 849 aa21.74■■□□□ 1.07
RORA-206ENST00000557822 RNF181Q9P0P0 153 aa21.73■■□□□ 1.07
RORA-206ENST00000557822 A0A1W2PP64 1363 aa21.73■■□□□ 1.07
RORA-206ENST00000557822 ROCK2O75116 1388 aaKnown RBP21.73■■□□□ 1.07
RORA-206ENST00000557822 KCNA3P22001 575 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms