RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
NEK9-211ENST00000557673 TMF1P82094 1093 aa23.13■■□□□ 1.29
NEK9-211ENST00000557673 ZCRB1Q8TBF4 217 aaKnown RBP23.13■■□□□ 1.29
NEK9-211ENST00000557673 UTRNP46939 3433 aa23.13■■□□□ 1.29
NEK9-211ENST00000557673 ANKRD36BQ8N2N9 1353 aa23.13■■□□□ 1.29
NEK9-211ENST00000557673 GPR162Q16538 588 aa23.11■■□□□ 1.29
NEK9-211ENST00000557673 HMGB2P26583 209 aaKnown RBP23.1■■□□□ 1.29
NEK9-211ENST00000557673 CGNL1Q0VF96 1302 aa23.09■■□□□ 1.29
NEK9-211ENST00000557673 RTL1A6NKG5 1358 aa23.09■■□□□ 1.29
NEK9-211ENST00000557673 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.29
NEK9-211ENST00000557673 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
NEK9-211ENST00000557673 CHD4Q14839 1912 aa23.07■■□□□ 1.28
NEK9-211ENST00000557673 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
NEK9-211ENST00000557673 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
NEK9-211ENST00000557673 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
NEK9-211ENST00000557673 FBLN1P23142 703 aa23.05■■□□□ 1.28
NEK9-211ENST00000557673 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
NEK9-211ENST00000557673 SMG6Q86US8 1419 aaKnown RBP23.05■■□□□ 1.28
NEK9-211ENST00000557673 HSPA5P11021 654 aaKnown RBP23.04■■□□□ 1.28
NEK9-211ENST00000557673 KCNQ4P56696 695 aa23.04■■□□□ 1.28
NEK9-211ENST00000557673 FYB1O15117 783 aa23.03■■□□□ 1.28
NEK9-211ENST00000557673 RRS1Q15050 365 aaKnown RBP23.03■■□□□ 1.28
NEK9-211ENST00000557673 CDCA8Q53HL2 280 aa23.03■■□□□ 1.28
NEK9-211ENST00000557673 NBPF6Q5VWK0 638 aa23.03■■□□□ 1.28
NEK9-211ENST00000557673 NBPF4Q96M43 638 aa23.03■■□□□ 1.28
NEK9-211ENST00000557673 NSD2O96028 1365 aa23.02■■□□□ 1.28
NEK9-211ENST00000557673 MEGF6O75095 1541 aa23.02■■□□□ 1.28
NEK9-211ENST00000557673 MSH5O43196 834 aa23.01■■□□□ 1.27
NEK9-211ENST00000557673 TATP17735 454 aaPredicted RBP23.01■■□□□ 1.27
NEK9-211ENST00000557673 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
NEK9-211ENST00000557673 DOT1LQ8TEK3 1739 aa23■■□□□ 1.27
NEK9-211ENST00000557673 C1QTNF8P60827 252 aa23■■□□□ 1.27
NEK9-211ENST00000557673 GGNBP2Q9H3C7 697 aa23■■□□□ 1.27
NEK9-211ENST00000557673 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
NEK9-211ENST00000557673 LY75O60449 1722 aa22.99■■□□□ 1.27
NEK9-211ENST00000557673 PCDH11XQ9BZA7 1347 aa22.98■■□□□ 1.27
NEK9-211ENST00000557673 PCDH11YQ9BZA8 1340 aa22.98■■□□□ 1.27
NEK9-211ENST00000557673 COL24A1Q17RW2 1714 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 KIF20BQ96Q89 1820 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 GRIN3BO60391 1043 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
NEK9-211ENST00000557673 USHBP1Q8N6Y0 703 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 FLAD1Q8NFF5 587 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 INSRP06213 1382 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 KIF24Q5T7B8 1368 aa22.97■■□□□ 1.27
NEK9-211ENST00000557673 RGPD2P0DJD1 1756 aa22.95■■□□□ 1.26
NEK9-211ENST00000557673 FLT4P35916 1363 aa22.95■■□□□ 1.26
NEK9-211ENST00000557673 COL23A1Q86Y22 540 aaPredicted RBP22.95■■□□□ 1.26
NEK9-211ENST00000557673 NLGN2Q8NFZ4 835 aa22.95■■□□□ 1.26
NEK9-211ENST00000557673 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
NEK9-211ENST00000557673 HSP90AB2PQ58FF8 381 aa22.94■■□□□ 1.26
NEK9-211ENST00000557673 GIGYF1O75420 1035 aaPredicted RBP22.93■■□□□ 1.26
NEK9-211ENST00000557673 TUBGCP6Q96RT7 1819 aa22.92■■□□□ 1.26
NEK9-211ENST00000557673 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
NEK9-211ENST00000557673 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
NEK9-211ENST00000557673 CARD14Q9BXL6 1004 aa22.92■■□□□ 1.26
NEK9-211ENST00000557673 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
NEK9-211ENST00000557673 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
NEK9-211ENST00000557673 PALLDQ8WX93 1383 aa22.9■■□□□ 1.26
NEK9-211ENST00000557673 CD2APQ9Y5K6 639 aa22.89■■□□□ 1.25
NEK9-211ENST00000557673 CYP27B1O15528 508 aa22.88■■□□□ 1.25
NEK9-211ENST00000557673 MSL1Q68DK7 614 aa22.88■■□□□ 1.25
NEK9-211ENST00000557673 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
NEK9-211ENST00000557673 YBX3P16989 372 aaKnown RBP eCLIP22.87■■□□□ 1.25
NEK9-211ENST00000557673 AK7Q96M32 723 aa22.86■■□□□ 1.25
NEK9-211ENST00000557673 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
NEK9-211ENST00000557673 C5P01031 1676 aa22.84■■□□□ 1.25
NEK9-211ENST00000557673 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
NEK9-211ENST00000557673 PPM1GO15355 546 aaPredicted RBP22.83■■□□□ 1.25
NEK9-211ENST00000557673 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
NEK9-211ENST00000557673 PIGBQ92521 554 aa22.82■■□□□ 1.24
NEK9-211ENST00000557673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.82■■□□□ 1.242e-6■■■□□ 14.7
NEK9-211ENST00000557673 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
NEK9-211ENST00000557673 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
NEK9-211ENST00000557673 SSFA2P28290 1259 aa22.79■■□□□ 1.24
NEK9-211ENST00000557673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.78■■□□□ 1.24
NEK9-211ENST00000557673 NCAPD2Q15021 1401 aa22.78■■□□□ 1.24
NEK9-211ENST00000557673 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
NEK9-211ENST00000557673 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
NEK9-211ENST00000557673 C4BP0C0L5 1744 aa22.77■■□□□ 1.24
NEK9-211ENST00000557673 LOC102724428A0A0B4J2F2 783 aa22.77■■□□□ 1.24
NEK9-211ENST00000557673 PHF14O94880 888 aa22.77■■□□□ 1.24
NEK9-211ENST00000557673 SIK1P57059 783 aa22.77■■□□□ 1.24
NEK9-211ENST00000557673 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.23
NEK9-211ENST00000557673 PANK3Q9H999 370 aa22.76■■□□□ 1.23
NEK9-211ENST00000557673 PKD1L3Q7Z443 1732 aa22.76■■□□□ 1.23
NEK9-211ENST00000557673 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
NEK9-211ENST00000557673 EYA1Q99502 592 aa22.75■■□□□ 1.23
NEK9-211ENST00000557673 ITGB4P16144 1822 aa22.75■■□□□ 1.23
NEK9-211ENST00000557673 GPBP1L1Q9HC44 474 aaPredicted RBP22.74■■□□□ 1.23
NEK9-211ENST00000557673 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
NEK9-211ENST00000557673 TOGARAM1Q9Y4F4 1720 aa22.73■■□□□ 1.23
NEK9-211ENST00000557673 ATP6V1AP38606 617 aa22.72■■□□□ 1.23
NEK9-211ENST00000557673 LINC00116Q8NCU8 138 aa22.72■■□□□ 1.23
NEK9-211ENST00000557673 POLKQ9UBT6 870 aa22.72■■□□□ 1.23
NEK9-211ENST00000557673 MAP2P11137 1827 aaKnown RBP22.72■■□□□ 1.23
NEK9-211ENST00000557673 PLEKHG2Q9H7P9 1386 aa22.72■■□□□ 1.23
NEK9-211ENST00000557673 GNPATO15228 680 aa22.71■■□□□ 1.23
NEK9-211ENST00000557673 PHKG2P15735 406 aa22.71■■□□□ 1.23
NEK9-211ENST00000557673 AMIGO3Q86WK7 504 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms