RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 U2AF1Q01081 240 aaKnown RBP eCLIP15.18■□□□□ 0.02
APEX1-220ENST00000557592 PDE3BQ13370 1112 aa15.18■□□□□ 0.02
APEX1-220ENST00000557592 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
APEX1-220ENST00000557592 KDRP35968 1356 aa15.17■□□□□ 0.02
APEX1-220ENST00000557592 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
APEX1-220ENST00000557592 EP400Q96L91 3159 aa15.16■□□□□ 0.02
APEX1-220ENST00000557592 PKD1L3Q7Z443 1732 aa15.15■□□□□ 0.02
APEX1-220ENST00000557592 FAM182BQ5T319 152 aa15.15■□□□□ 0.02
APEX1-220ENST00000557592 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
APEX1-220ENST00000557592 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
APEX1-220ENST00000557592 CCDC184Q52MB2 194 aa15.14■□□□□ 0.01
APEX1-220ENST00000557592 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
APEX1-220ENST00000557592 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
APEX1-220ENST00000557592 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
APEX1-220ENST00000557592 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
APEX1-220ENST00000557592 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
APEX1-220ENST00000557592 PRKAR2BP31323 418 aa15.12■□□□□ 0.01
APEX1-220ENST00000557592 PLEKHO1Q53GL0 409 aaPredicted RBP15.12■□□□□ 0.01
APEX1-220ENST00000557592 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
APEX1-220ENST00000557592 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.018e-8■□□□□ 10.1
APEX1-220ENST00000557592 PCDH11XQ9BZA7 1347 aa15.12■□□□□ 0.01
APEX1-220ENST00000557592 PCDH11YQ9BZA8 1340 aa15.12■□□□□ 0.01
APEX1-220ENST00000557592 FCHSD2O94868 740 aa15.11■□□□□ 0.01
APEX1-220ENST00000557592 AMOTQ4VCS5 1084 aa15.11■□□□□ 0.01
APEX1-220ENST00000557592 CYP27B1O15528 508 aa15.1■□□□□ 0.01
APEX1-220ENST00000557592 ZNF530Q6P9A1 599 aaPredicted RBP15.1■□□□□ 0.01
APEX1-220ENST00000557592 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
APEX1-220ENST00000557592 FAM196AQ6ZSG2 479 aa15.09■□□□□ 0.01
APEX1-220ENST00000557592 SOCS7O14512 581 aa15.08■□□□□ 0
APEX1-220ENST00000557592 NEFMP07197 916 aa15.08■□□□□ 0
APEX1-220ENST00000557592 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
APEX1-220ENST00000557592 IFNL2Q8IZJ0 200 aa15.08■□□□□ 0
APEX1-220ENST00000557592 MIER1Q8N108 512 aa15.08■□□□□ 0
APEX1-220ENST00000557592 PHACTR3Q96KR7 559 aa15.08■□□□□ 0
APEX1-220ENST00000557592 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0
APEX1-220ENST00000557592 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
APEX1-220ENST00000557592 PHKG2P15735 406 aa15.07■□□□□ 0
APEX1-220ENST00000557592 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
APEX1-220ENST00000557592 SBF2Q86WG5 1849 aa15.06■□□□□ 0
APEX1-220ENST00000557592 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
APEX1-220ENST00000557592 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
APEX1-220ENST00000557592 MAPK8IP3Q9UPT6 1336 aa15.06■□□□□ 0
APEX1-220ENST00000557592 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
APEX1-220ENST00000557592 CCER2I3L3R5 266 aa15.05■□□□□ -0
APEX1-220ENST00000557592 GAS2L2Q8NHY3 880 aa15.05■□□□□ -0
APEX1-220ENST00000557592 ACSBG1Q96GR2 724 aa15.05■□□□□ -0
APEX1-220ENST00000557592 PLEKHF1Q96S99 279 aa15.05■□□□□ -0
APEX1-220ENST00000557592 BCL9O00512 1426 aa15.05■□□□□ -0
APEX1-220ENST00000557592 TRIM37O94972 964 aa15.04■□□□□ -0
APEX1-220ENST00000557592 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
APEX1-220ENST00000557592 HSP90AB1P08238 724 aaKnown RBP15.03■□□□□ -0
APEX1-220ENST00000557592 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
APEX1-220ENST00000557592 FAM9BQ8IZU0 186 aa15.03■□□□□ -0
APEX1-220ENST00000557592 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
APEX1-220ENST00000557592 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
APEX1-220ENST00000557592 NHSQ6T4R5 1651 aa15.03■□□□□ -0
APEX1-220ENST00000557592 MAP3K5Q99683 1374 aa15.02■□□□□ -0
APEX1-220ENST00000557592 VIRMAQ69YN4 1812 aaKnown RBP15.02■□□□□ -0
APEX1-220ENST00000557592 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
APEX1-220ENST00000557592 RUNDC1Q96C34 613 aa15.02■□□□□ -0
APEX1-220ENST00000557592 DCAF5Q96JK2 942 aa15.02■□□□□ -0
APEX1-220ENST00000557592 TNS1Q9HBL0 1735 aaKnown RBP15.01□□□□□ -0.01
APEX1-220ENST00000557592 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
APEX1-220ENST00000557592 KCNQ2O43526 872 aa15.01□□□□□ -0.01
APEX1-220ENST00000557592 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
APEX1-220ENST00000557592 PTF1AQ7RTS3 328 aa15.01□□□□□ -0.01
APEX1-220ENST00000557592 UPF1Q92900 1129 aaKnown RBP eCLIP15.01□□□□□ -0.01
APEX1-220ENST00000557592 DLG5Q8TDM6 1919 aa15.01□□□□□ -0.01
APEX1-220ENST00000557592 ITGB4P16144 1822 aa15.01□□□□□ -0.01
APEX1-220ENST00000557592 SCN11AQ9UI33 1791 aa15.01□□□□□ -0.01
APEX1-220ENST00000557592 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
APEX1-220ENST00000557592 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
APEX1-220ENST00000557592 NFE2L2Q16236 605 aa15□□□□□ -0.01
APEX1-220ENST00000557592 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
APEX1-220ENST00000557592 BTAF1O14981 1849 aa14.99□□□□□ -0.01
APEX1-220ENST00000557592 CCDC125Q86Z20 511 aa14.99□□□□□ -0.01
APEX1-220ENST00000557592 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
APEX1-220ENST00000557592 RNMTO43148 476 aaKnown RBP14.98□□□□□ -0.01
APEX1-220ENST00000557592 APBA3O96018 575 aa14.98□□□□□ -0.01
APEX1-220ENST00000557592 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
APEX1-220ENST00000557592 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
APEX1-220ENST00000557592 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
APEX1-220ENST00000557592 ERVV-2B6SEH9 535 aa14.97□□□□□ -0.01
APEX1-220ENST00000557592 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
APEX1-220ENST00000557592 RIPK4P57078 832 aa14.97□□□□□ -0.01
APEX1-220ENST00000557592 CABP4P57796 275 aa14.97□□□□□ -0.01
APEX1-220ENST00000557592 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
APEX1-220ENST00000557592 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
APEX1-220ENST00000557592 APAF1O14727 1248 aa14.96□□□□□ -0.01
APEX1-220ENST00000557592 MCM10Q7L590 875 aa14.96□□□□□ -0.01
APEX1-220ENST00000557592 IL17REQ8NFR9 667 aa14.96□□□□□ -0.01
APEX1-220ENST00000557592 BAG6P46379 1132 aa14.95□□□□□ -0.02
APEX1-220ENST00000557592 DCTN1Q14203 1278 aa14.95□□□□□ -0.02
APEX1-220ENST00000557592 PIGBQ92521 554 aa14.95□□□□□ -0.02
APEX1-220ENST00000557592 MRC1P22897 1456 aa14.95□□□□□ -0.02
APEX1-220ENST00000557592 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
APEX1-220ENST00000557592 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
APEX1-220ENST00000557592 TEFQ10587 303 aa14.94□□□□□ -0.02
APEX1-220ENST00000557592 DEFB132Q7Z7B7 95 aa14.94□□□□□ -0.02
APEX1-220ENST00000557592 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms