RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 AMER1Q5JTC6 1135 aaPredicted RBP21.65■■□□□ 1.06
TUBB3-214ENST00000557490 FHDC1Q9C0D6 1143 aaPredicted RBP21.65■■□□□ 1.06
TUBB3-214ENST00000557490 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
TUBB3-214ENST00000557490 SBF2Q86WG5 1849 aa21.64■■□□□ 1.06
TUBB3-214ENST00000557490 ANKRD26Q9UPS8 1709 aa21.63■■□□□ 1.05
TUBB3-214ENST00000557490 FAM208AQ9UK61 1670 aaKnown RBP21.63■■□□□ 1.05
TUBB3-214ENST00000557490 LRRC37A3O60309 1634 aa21.63■■□□□ 1.05
TUBB3-214ENST00000557490 PER1O15534 1290 aaPredicted RBP21.63■■□□□ 1.05
TUBB3-214ENST00000557490 OVOS2A0A0G2JMS6 1433 aa21.63■■□□□ 1.05
TUBB3-214ENST00000557490 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
TUBB3-214ENST00000557490 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
TUBB3-214ENST00000557490 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
TUBB3-214ENST00000557490 ATF5Q9Y2D1 282 aaPredicted RBP21.62■■□□□ 1.05
TUBB3-214ENST00000557490 PLSCR1O15162 318 aa21.61■■□□□ 1.05
TUBB3-214ENST00000557490 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
TUBB3-214ENST00000557490 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
TUBB3-214ENST00000557490 MARCH10Q8NA82 808 aaPredicted RBP21.61■■□□□ 1.05
TUBB3-214ENST00000557490 TNS2Q63HR2 1409 aa21.61■■□□□ 1.05
TUBB3-214ENST00000557490 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
TUBB3-214ENST00000557490 USHBP1Q8N6Y0 703 aa21.59■■□□□ 1.05
TUBB3-214ENST00000557490 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
TUBB3-214ENST00000557490 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
TUBB3-214ENST00000557490 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
TUBB3-214ENST00000557490 PROM2Q8N271 834 aa21.56■■□□□ 1.04
TUBB3-214ENST00000557490 MAP2P11137 1827 aaKnown RBP21.56■■□□□ 1.04
TUBB3-214ENST00000557490 NPC1L1Q9UHC9 1359 aa21.56■■□□□ 1.04
TUBB3-214ENST00000557490 CNGB1Q14028 1251 aaPredicted RBP21.55■■□□□ 1.04
TUBB3-214ENST00000557490 PTF1AQ7RTS3 328 aa21.55■■□□□ 1.04
TUBB3-214ENST00000557490 SGIP1Q9BQI5 828 aa21.55■■□□□ 1.04
TUBB3-214ENST00000557490 BCL9O00512 1426 aa21.55■■□□□ 1.04
TUBB3-214ENST00000557490 TATP17735 454 aaPredicted RBP21.54■■□□□ 1.04
TUBB3-214ENST00000557490 EIF4A2Q14240 407 aaKnown RBP21.54■■□□□ 1.04
TUBB3-214ENST00000557490 ZCRB1Q8TBF4 217 aaKnown RBP21.54■■□□□ 1.04
TUBB3-214ENST00000557490 DDX54Q8TDD1 881 aaKnown RBP21.54■■□□□ 1.04
TUBB3-214ENST00000557490 EYA1Q99502 592 aa21.53■■□□□ 1.04
TUBB3-214ENST00000557490 MEGF6O75095 1541 aa21.53■■□□□ 1.04
TUBB3-214ENST00000557490 RGPD2P0DJD1 1756 aa21.52■■□□□ 1.04
TUBB3-214ENST00000557490 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
TUBB3-214ENST00000557490 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.03
TUBB3-214ENST00000557490 MAP3K5Q99683 1374 aa21.5■■□□□ 1.03
TUBB3-214ENST00000557490 STK32BQ9NY57 414 aa21.5■■□□□ 1.03
TUBB3-214ENST00000557490 MTHFSP49914 203 aa21.49■■□□□ 1.03
TUBB3-214ENST00000557490 NCAPD2Q15021 1401 aa21.48■■□□□ 1.03
TUBB3-214ENST00000557490 SLC15A2Q16348 729 aa21.48■■□□□ 1.03
TUBB3-214ENST00000557490 ACSBG1Q96GR2 724 aa21.47■■□□□ 1.03
TUBB3-214ENST00000557490 ARXQ96QS3 562 aa21.47■■□□□ 1.03
TUBB3-214ENST00000557490 GPR162Q16538 588 aa21.46■■□□□ 1.03
TUBB3-214ENST00000557490 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
TUBB3-214ENST00000557490 IGSF1Q8N6C5 1336 aa21.45■■□□□ 1.02
TUBB3-214ENST00000557490 PCDH11XQ9BZA7 1347 aa21.45■■□□□ 1.02
TUBB3-214ENST00000557490 PCDH11YQ9BZA8 1340 aa21.45■■□□□ 1.02
TUBB3-214ENST00000557490 SPG7Q9UQ90 795 aa21.44■■□□□ 1.02
TUBB3-214ENST00000557490 IL13P35225 146 aa21.43■■□□□ 1.02
TUBB3-214ENST00000557490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.41■■□□□ 1.02
TUBB3-214ENST00000557490 DIAPH1O60610 1272 aaKnown RBP21.4■■□□□ 1.02
TUBB3-214ENST00000557490 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
TUBB3-214ENST00000557490 SULT6B1Q6IMI4 303 aa21.39■■□□□ 1.01
TUBB3-214ENST00000557490 PLEKHG2Q9H7P9 1386 aa21.38■■□□□ 1.01
TUBB3-214ENST00000557490 NHSQ6T4R5 1651 aa21.38■■□□□ 1.01
TUBB3-214ENST00000557490 PAPPAQ13219 1627 aa21.38■■□□□ 1.01
TUBB3-214ENST00000557490 CYP27B1O15528 508 aa21.38■■□□□ 1.01
TUBB3-214ENST00000557490 PRIM1P49642 420 aaKnown RBP21.38■■□□□ 1.01
TUBB3-214ENST00000557490 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
TUBB3-214ENST00000557490 PLEKHO1Q53GL0 409 aaPredicted RBP21.37■■□□□ 1.01
TUBB3-214ENST00000557490 AEBP1Q8IUX7 1158 aa21.37■■□□□ 1.01
TUBB3-214ENST00000557490 CFAP53Q96M91 514 aa21.37■■□□□ 1.01
TUBB3-214ENST00000557490 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
TUBB3-214ENST00000557490 AMOTQ4VCS5 1084 aa21.35■■□□□ 1.01
TUBB3-214ENST00000557490 IFNL2Q8IZJ0 200 aa21.35■■□□□ 1.01
TUBB3-214ENST00000557490 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
TUBB3-214ENST00000557490 PKD1L3Q7Z443 1732 aa21.34■■□□□ 1.01
TUBB3-214ENST00000557490 KAT6BQ8WYB5 2073 aa21.33■■□□□ 1.01
TUBB3-214ENST00000557490 PHKG2P15735 406 aa21.33■■□□□ 1.01
TUBB3-214ENST00000557490 NKX1-1Q15270 411 aaPredicted RBP21.33■■□□□ 1.01
TUBB3-214ENST00000557490 KDRP35968 1356 aa21.33■■□□□ 1
TUBB3-214ENST00000557490 U2SURPO15042 1029 aaKnown RBP21.32■■□□□ 1
TUBB3-214ENST00000557490 KLHL34Q8N239 644 aa21.32■■□□□ 1
TUBB3-214ENST00000557490 HMOX1P09601 288 aa21.31■■□□□ 1
TUBB3-214ENST00000557490 HSPA6P17066 643 aa21.31■■□□□ 1
TUBB3-214ENST00000557490 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
TUBB3-214ENST00000557490 ATP10DQ9P241 1426 aa21.3■■□□□ 1
TUBB3-214ENST00000557490 COL24A1Q17RW2 1714 aa21.3■■□□□ 1
TUBB3-214ENST00000557490 DOT1LQ8TEK3 1739 aa21.3■■□□□ 1
TUBB3-214ENST00000557490 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
TUBB3-214ENST00000557490 COL3A1P02461 1466 aaPredicted RBP21.3■■□□□ 1
TUBB3-214ENST00000557490 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
TUBB3-214ENST00000557490 NUDCQ9Y266 331 aa21.29■■□□□ 1
TUBB3-214ENST00000557490 BTAF1O14981 1849 aa21.29■■□□□ 1
TUBB3-214ENST00000557490 ZNF827Q17R98 1081 aa21.28■■□□□ 1
TUBB3-214ENST00000557490 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
TUBB3-214ENST00000557490 NLGN2Q8NFZ4 835 aa21.28■■□□□ 1
TUBB3-214ENST00000557490 RALBP1Q15311 655 aa21.27■■□□□ 1
TUBB3-214ENST00000557490 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
TUBB3-214ENST00000557490 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
TUBB3-214ENST00000557490 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
TUBB3-214ENST00000557490 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
TUBB3-214ENST00000557490 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
TUBB3-214ENST00000557490 POLD1P28340 1107 aa21.23■□□□□ 0.99
TUBB3-214ENST00000557490 PIGBQ92521 554 aa21.23■□□□□ 0.99
TUBB3-214ENST00000557490 SMARCC1Q92922 1105 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms