RNA–Protein interactions for RNA: ENST00000557435.1

SRSF5-218, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-218ENST00000557435 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
SRSF5-218ENST00000557435 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
SRSF5-218ENST00000557435 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
SRSF5-218ENST00000557435 RALBP1Q15311 655 aa12.68□□□□□ -0.38
SRSF5-218ENST00000557435 MARCH10Q8NA82 808 aaPredicted RBP12.68□□□□□ -0.38
SRSF5-218ENST00000557435 PLEKHG2Q9H7P9 1386 aa12.68□□□□□ -0.38
SRSF5-218ENST00000557435 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
SRSF5-218ENST00000557435 RAPGEF4Q8WZA2 1011 aa12.67□□□□□ -0.38
SRSF5-218ENST00000557435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.383e-43■■■□□ 15.4
SRSF5-218ENST00000557435 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
SRSF5-218ENST00000557435 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
SRSF5-218ENST00000557435 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
SRSF5-218ENST00000557435 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
SRSF5-218ENST00000557435 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
SRSF5-218ENST00000557435 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
SRSF5-218ENST00000557435 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
SRSF5-218ENST00000557435 MEGF6O75095 1541 aa12.65□□□□□ -0.38
SRSF5-218ENST00000557435 KDRP35968 1356 aa12.65□□□□□ -0.38
SRSF5-218ENST00000557435 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
SRSF5-218ENST00000557435 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
SRSF5-218ENST00000557435 SBF2Q86WG5 1849 aa12.64□□□□□ -0.39
SRSF5-218ENST00000557435 COL3A1P02461 1466 aaPredicted RBP12.64□□□□□ -0.39
SRSF5-218ENST00000557435 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
SRSF5-218ENST00000557435 TRIM37O94972 964 aa12.62□□□□□ -0.39
SRSF5-218ENST00000557435 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
SRSF5-218ENST00000557435 SULT6B1Q6IMI4 303 aa12.62□□□□□ -0.39
SRSF5-218ENST00000557435 PRKRIP1Q9H875 184 aaPredicted RBP12.62□□□□□ -0.39
SRSF5-218ENST00000557435 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
SRSF5-218ENST00000557435 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
SRSF5-218ENST00000557435 CYP27B1O15528 508 aa12.61□□□□□ -0.39
SRSF5-218ENST00000557435 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
SRSF5-218ENST00000557435 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
SRSF5-218ENST00000557435 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
SRSF5-218ENST00000557435 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
SRSF5-218ENST00000557435 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
SRSF5-218ENST00000557435 PKD1L3Q7Z443 1732 aa12.61□□□□□ -0.39
SRSF5-218ENST00000557435 SF3B2Q13435 895 aaKnown RBP12.6□□□□□ -0.39
SRSF5-218ENST00000557435 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
SRSF5-218ENST00000557435 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
SRSF5-218ENST00000557435 PCDH11XQ9BZA7 1347 aa12.6□□□□□ -0.39
SRSF5-218ENST00000557435 PCDH11YQ9BZA8 1340 aa12.6□□□□□ -0.39
SRSF5-218ENST00000557435 PLSCR1O15162 318 aa12.59□□□□□ -0.39
SRSF5-218ENST00000557435 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
SRSF5-218ENST00000557435 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
SRSF5-218ENST00000557435 BAG6P46379 1132 aa12.58□□□□□ -0.4
SRSF5-218ENST00000557435 IFNL2Q8IZJ0 200 aa12.58□□□□□ -0.4
SRSF5-218ENST00000557435 TNS1Q9HBL0 1735 aaKnown RBP12.58□□□□□ -0.4
SRSF5-218ENST00000557435 KCNQ2O43526 872 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 FCHSD2O94868 740 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 APBA3O96018 575 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 HMOX1P09601 288 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 PHKG2P15735 406 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 PTF1AQ7RTS3 328 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 DEFB132Q7Z7B7 95 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
SRSF5-218ENST00000557435 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
SRSF5-218ENST00000557435 NHSQ6T4R5 1651 aa12.55□□□□□ -0.4
SRSF5-218ENST00000557435 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
SRSF5-218ENST00000557435 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
SRSF5-218ENST00000557435 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
SRSF5-218ENST00000557435 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
SRSF5-218ENST00000557435 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
SRSF5-218ENST00000557435 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
SRSF5-218ENST00000557435 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
SRSF5-218ENST00000557435 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
SRSF5-218ENST00000557435 PROM2Q8N271 834 aa12.53□□□□□ -0.4
SRSF5-218ENST00000557435 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
SRSF5-218ENST00000557435 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
SRSF5-218ENST00000557435 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
SRSF5-218ENST00000557435 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
SRSF5-218ENST00000557435 ZBTB22O15209 634 aa12.52□□□□□ -0.41
SRSF5-218ENST00000557435 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
SRSF5-218ENST00000557435 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
SRSF5-218ENST00000557435 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.41
SRSF5-218ENST00000557435 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
SRSF5-218ENST00000557435 BTAF1O14981 1849 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 ITGB4P16144 1822 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 ANP32CO43423 234 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
SRSF5-218ENST00000557435 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
SRSF5-218ENST00000557435 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
SRSF5-218ENST00000557435 PIGBQ92521 554 aa12.5□□□□□ -0.41
SRSF5-218ENST00000557435 TOGARAM1Q9Y4F4 1720 aa12.49□□□□□ -0.41
SRSF5-218ENST00000557435 TXNRD1Q16881 649 aa12.49□□□□□ -0.41
SRSF5-218ENST00000557435 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
SRSF5-218ENST00000557435 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
SRSF5-218ENST00000557435 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
SRSF5-218ENST00000557435 KDM6AO15550 1401 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-218ENST00000557435 RREB1Q92766 1687 aa12.48□□□□□ -0.41
SRSF5-218ENST00000557435 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
SRSF5-218ENST00000557435 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
SRSF5-218ENST00000557435 RNMTO43148 476 aaKnown RBP12.47□□□□□ -0.41
SRSF5-218ENST00000557435 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
SRSF5-218ENST00000557435 SLC27A3Q5K4L6 730 aa12.47□□□□□ -0.41
SRSF5-218ENST00000557435 SMARCC1Q92922 1105 aaPredicted RBP12.47□□□□□ -0.41
SRSF5-218ENST00000557435 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms