RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 DLG5Q8TDM6 1919 aa15.81■□□□□ 0.12
APEX1-219ENST00000557365 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
APEX1-219ENST00000557365 USP21Q9UK80 565 aa15.81■□□□□ 0.12
APEX1-219ENST00000557365 OVOS2A0A0G2JMS6 1433 aa15.8■□□□□ 0.12
APEX1-219ENST00000557365 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
APEX1-219ENST00000557365 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
APEX1-219ENST00000557365 BARGINQ6ZT62 677 aa15.8■□□□□ 0.12
APEX1-219ENST00000557365 AFF2P51816 1311 aa15.79■□□□□ 0.12
APEX1-219ENST00000557365 IL2RBP14784 551 aa15.79■□□□□ 0.12
APEX1-219ENST00000557365 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
APEX1-219ENST00000557365 MEGF6O75095 1541 aa15.78■□□□□ 0.12
APEX1-219ENST00000557365 ATRNO75882 1429 aa15.78■□□□□ 0.12
APEX1-219ENST00000557365 ZNF521Q96K83 1311 aa15.78■□□□□ 0.12
APEX1-219ENST00000557365 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
APEX1-219ENST00000557365 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
APEX1-219ENST00000557365 SPG7Q9UQ90 795 aa15.78■□□□□ 0.12
APEX1-219ENST00000557365 RIPK4P57078 832 aa15.77■□□□□ 0.12
APEX1-219ENST00000557365 TRPC5Q9UL62 973 aaPredicted RBP15.77■□□□□ 0.12
APEX1-219ENST00000557365 WDR63Q8IWG1 891 aa15.76■□□□□ 0.11
APEX1-219ENST00000557365 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
APEX1-219ENST00000557365 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
APEX1-219ENST00000557365 AKAP4Q5JQC9 854 aa15.75■□□□□ 0.11
APEX1-219ENST00000557365 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
APEX1-219ENST00000557365 ZCRB1Q8TBF4 217 aaKnown RBP15.75■□□□□ 0.11
APEX1-219ENST00000557365 IL16Q14005 1332 aa15.74■□□□□ 0.11
APEX1-219ENST00000557365 ADAMTS7Q9UKP4 1686 aa15.74■□□□□ 0.11
APEX1-219ENST00000557365 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
APEX1-219ENST00000557365 ONECUT3O60422 494 aaPredicted RBP15.74■□□□□ 0.11
APEX1-219ENST00000557365 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
APEX1-219ENST00000557365 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
APEX1-219ENST00000557365 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
APEX1-219ENST00000557365 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
APEX1-219ENST00000557365 ZNF530Q6P9A1 599 aaPredicted RBP15.73■□□□□ 0.11
APEX1-219ENST00000557365 IFNL2Q8IZJ0 200 aa15.73■□□□□ 0.11
APEX1-219ENST00000557365 SHANK3Q9BYB0 1731 aa15.73■□□□□ 0.11
APEX1-219ENST00000557365 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
APEX1-219ENST00000557365 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
APEX1-219ENST00000557365 GLI3P10071 1580 aa15.72■□□□□ 0.11
APEX1-219ENST00000557365 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
APEX1-219ENST00000557365 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
APEX1-219ENST00000557365 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
APEX1-219ENST00000557365 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
APEX1-219ENST00000557365 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
APEX1-219ENST00000557365 VIRMAQ69YN4 1812 aaKnown RBP15.71■□□□□ 0.11
APEX1-219ENST00000557365 THSD7AQ9UPZ6 1657 aa15.71■□□□□ 0.11
APEX1-219ENST00000557365 EXOC5O00471 708 aa15.71■□□□□ 0.11
APEX1-219ENST00000557365 PHKG2P15735 406 aa15.71■□□□□ 0.11
APEX1-219ENST00000557365 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
APEX1-219ENST00000557365 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
APEX1-219ENST00000557365 RTF1Q92541 710 aaKnown RBP15.71■□□□□ 0.11
APEX1-219ENST00000557365 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.11
APEX1-219ENST00000557365 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
APEX1-219ENST00000557365 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
APEX1-219ENST00000557365 TNS2Q63HR2 1409 aa15.7■□□□□ 0.1
APEX1-219ENST00000557365 SCN11AQ9UI33 1791 aa15.7■□□□□ 0.1
APEX1-219ENST00000557365 BABAM1Q9NWV8 329 aa15.7■□□□□ 0.1
APEX1-219ENST00000557365 LRRC37A3O60309 1634 aa15.69■□□□□ 0.1
APEX1-219ENST00000557365 CYP27B1O15528 508 aa15.69■□□□□ 0.1
APEX1-219ENST00000557365 TRMT2AQ8IZ69 625 aaKnown RBP15.69■□□□□ 0.1
APEX1-219ENST00000557365 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
APEX1-219ENST00000557365 E9PSI1 815 aa15.68■□□□□ 0.1
APEX1-219ENST00000557365 DDB1Q16531 1140 aa15.68■□□□□ 0.1
APEX1-219ENST00000557365 IL17REQ8NFR9 667 aa15.68■□□□□ 0.1
APEX1-219ENST00000557365 DCAF5Q96JK2 942 aa15.68■□□□□ 0.1
APEX1-219ENST00000557365 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
APEX1-219ENST00000557365 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
APEX1-219ENST00000557365 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
APEX1-219ENST00000557365 RNMTO43148 476 aaKnown RBP15.66■□□□□ 0.1
APEX1-219ENST00000557365 ZNF853P0CG23 659 aa15.66■□□□□ 0.1
APEX1-219ENST00000557365 GNAI1P63096 354 aa15.66■□□□□ 0.1
APEX1-219ENST00000557365 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
APEX1-219ENST00000557365 IFT57Q9NWB7 429 aa15.66■□□□□ 0.1
APEX1-219ENST00000557365 SIPA1L3O60292 1781 aaPredicted RBP15.66■□□□□ 0.1
APEX1-219ENST00000557365 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
APEX1-219ENST00000557365 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
APEX1-219ENST00000557365 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
APEX1-219ENST00000557365 MRC1P22897 1456 aa15.65■□□□□ 0.1
APEX1-219ENST00000557365 BCL9O00512 1426 aa15.64■□□□□ 0.09
APEX1-219ENST00000557365 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
APEX1-219ENST00000557365 MCM10Q7L590 875 aa15.64■□□□□ 0.09
APEX1-219ENST00000557365 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
APEX1-219ENST00000557365 CHL1O00533 1208 aa15.63■□□□□ 0.09
APEX1-219ENST00000557365 CENPBP07199 599 aaPredicted RBP15.63■□□□□ 0.09
APEX1-219ENST00000557365 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
APEX1-219ENST00000557365 TAF7Q15545 349 aaPredicted RBP15.63■□□□□ 0.09
APEX1-219ENST00000557365 MPRIPQ6WCQ1 1025 aa15.63■□□□□ 0.09
APEX1-219ENST00000557365 DDX54Q8TDD1 881 aaKnown RBP15.63■□□□□ 0.09
APEX1-219ENST00000557365 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
APEX1-219ENST00000557365 TEFQ10587 303 aa15.62■□□□□ 0.09
APEX1-219ENST00000557365 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
APEX1-219ENST00000557365 CDCA7LQ96GN5 454 aa15.62■□□□□ 0.09
APEX1-219ENST00000557365 RGS17Q9UGC6 210 aaPredicted RBP15.62■□□□□ 0.09
APEX1-219ENST00000557365 MARCH10Q8NA82 808 aaPredicted RBP15.61■□□□□ 0.09
APEX1-219ENST00000557365 THUMPD2Q9BTF0 503 aaKnown RBP15.61■□□□□ 0.09
APEX1-219ENST00000557365 SLC52A2Q9HAB3 445 aa15.61■□□□□ 0.09
APEX1-219ENST00000557365 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
APEX1-219ENST00000557365 RXRBP28702 533 aa15.6■□□□□ 0.09
APEX1-219ENST00000557365 SEPT12Q8IYM1 358 aa15.6■□□□□ 0.09
APEX1-219ENST00000557365 KDM3BQ7LBC6 1761 aa15.59■□□□□ 0.09
APEX1-219ENST00000557365 ITGB4P16144 1822 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms