RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ARHGEF11O15085 1522 aa9.89□□□□□ -0.83
CHD8-213ENST00000557364 THOC2Q8NI27 1593 aaKnown RBP9.89□□□□□ -0.83
CHD8-213ENST00000557364 RAB34Q9BZG1 259 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 NFE2L2Q16236 605 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 RAI14Q9P0K7 980 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 STK38Q15208 465 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
CHD8-213ENST00000557364 LDHCP07864 332 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 DEKP35659 375 aaKnown RBP9.88□□□□□ -0.83
CHD8-213ENST00000557364 SPTY2D1Q68D10 685 aaPredicted RBP9.88□□□□□ -0.83
CHD8-213ENST00000557364 HSP90B2PQ58FF3 399 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 MYO1BO43795 1136 aa9.88□□□□□ -0.83
CHD8-213ENST00000557364 CRACR2BQ8N4Y2 399 aaPredicted RBP9.88□□□□□ -0.83
CHD8-213ENST00000557364 CDC5LQ99459 802 aaKnown RBP9.88□□□□□ -0.83
CHD8-213ENST00000557364 PHAXQ9H814 394 aaKnown RBP9.88□□□□□ -0.83
CHD8-213ENST00000557364 NCOA1Q15788 1441 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 MYL6BP14649 208 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
CHD8-213ENST00000557364 ANKIB1Q9P2G1 1089 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
CHD8-213ENST00000557364 SMARCC1Q92922 1105 aaPredicted RBP9.87□□□□□ -0.83
CHD8-213ENST00000557364 AIDAQ96BJ3 306 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 SLC5A1P13866 664 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 IMMTQ16891 758 aaKnown RBP9.87□□□□□ -0.83
CHD8-213ENST00000557364 EXOC6Q8TAG9 804 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
CHD8-213ENST00000557364 CFAP45Q9UL16 551 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 ST5P78524 1137 aa9.87□□□□□ -0.83
CHD8-213ENST00000557364 HSP90AA2PQ14568 343 aaPredicted RBP9.86□□□□□ -0.83
CHD8-213ENST00000557364 TAF7Q15545 349 aaPredicted RBP9.86□□□□□ -0.83
CHD8-213ENST00000557364 PPP1R42Q7Z4L9 355 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 CUL5Q93034 780 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 SLC12A5Q9H2X9 1139 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 TNRQ92752 1358 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 MAP3K12Q12852 859 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 MNS1Q8NEH6 495 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 METTL24Q5JXM2 366 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 NPHP3Q7Z494 1330 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 KIF20AO95235 890 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 IFT57Q9NWB7 429 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 ADAMTS8Q9UP79 889 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 CETN2P41208 172 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 IFIT5Q13325 482 aaKnown RBP9.86□□□□□ -0.83
CHD8-213ENST00000557364 DZIP1Q86YF9 867 aaKnown RBP9.86□□□□□ -0.83
CHD8-213ENST00000557364 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
CHD8-213ENST00000557364 FMNL2Q96PY5 1086 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 CAGE1Q8TC20 777 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 HMGB1P09429 215 aaKnown RBP9.85□□□□□ -0.83
CHD8-213ENST00000557364 FKBP4Q02790 459 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD8-213ENST00000557364 TTF1Q15361 905 aaPredicted RBP9.85□□□□□ -0.83
CHD8-213ENST00000557364 CCDC12Q8WUD4 166 aaPredicted RBP9.85□□□□□ -0.83
CHD8-213ENST00000557364 SRGAP3O43295 1099 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 EXOSC9Q06265 439 aaKnown RBP9.85□□□□□ -0.83
CHD8-213ENST00000557364 IQCEQ6IPM2 695 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 NSD3Q9BZ95 1437 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 USP5P45974 858 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 ZGPATQ8N5A5 531 aaKnown RBP9.85□□□□□ -0.83
CHD8-213ENST00000557364 B4DLN1 442 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 CBFA2T2O43439 604 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 BAG3O95817 575 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 MRPL12P52815 198 aaKnown RBP9.85□□□□□ -0.83
CHD8-213ENST00000557364 AACSQ86V21 672 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 TMEM87AQ8NBN3 555 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
CHD8-213ENST00000557364 ZC3H6P61129 1189 aaKnown RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 KIF1BPQ96EK5 621 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 AMOTL2Q9Y2J4 779 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 WDR33Q9C0J8 1336 aaKnown RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 GSTO1P78417 241 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 BLOC1S2Q6QNY1 142 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 CCDC178Q5BJE1 867 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 C11orf95C9JLR9 678 aaPredicted RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 FGFR1OPO95684 399 aaKnown RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 NBPF8Q3BBV2 869 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
CHD8-213ENST00000557364 CDK13Q14004 1512 aaKnown RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 DHX29Q7Z478 1369 aaKnown RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 POLR3DP05423 398 aaPredicted RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 FOXD4L6Q3SYB3 417 aaPredicted RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 FOXD4L3Q6VB84 417 aaPredicted RBP9.84□□□□□ -0.83
CHD8-213ENST00000557364 WASLO00401 505 aaPredicted RBP9.83□□□□□ -0.84
CHD8-213ENST00000557364 ALDH1L2Q3SY69 923 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 GLRX3O76003 335 aaKnown RBP9.83□□□□□ -0.84
CHD8-213ENST00000557364 MKNK2Q9HBH9 465 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 ANKRD18BA2A2Z9 1011 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 DDX46Q7L014 1031 aaKnown RBP9.83□□□□□ -0.84
CHD8-213ENST00000557364 NOB1Q9ULX3 412 aaKnown RBP9.83□□□□□ -0.84
CHD8-213ENST00000557364 PCF11O94913 1555 aaKnown RBP9.83□□□□□ -0.84
CHD8-213ENST00000557364 HLA-DOAP06340 250 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 KRT85P78386 507 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 IFNL2Q8IZJ0 200 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 CTTNBP2Q8WZ74 1663 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 PYM1Q9BRP8 204 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms