RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
SNX6-209ENST00000557265 LTN1O94822 1766 aa17.38■□□□□ 0.37
SNX6-209ENST00000557265 MSH5O43196 834 aa17.37■□□□□ 0.37
SNX6-209ENST00000557265 NSD2O96028 1365 aa17.37■□□□□ 0.37
SNX6-209ENST00000557265 GIGYF1O75420 1035 aaPredicted RBP17.36■□□□□ 0.37
SNX6-209ENST00000557265 KAT6BQ8WYB5 2073 aa17.35■□□□□ 0.37
SNX6-209ENST00000557265 COL23A1Q86Y22 540 aaPredicted RBP17.34■□□□□ 0.37
SNX6-209ENST00000557265 TESK2Q96S53 571 aa17.34■□□□□ 0.37
SNX6-209ENST00000557265 USP47Q96K76 1375 aa17.33■□□□□ 0.36
SNX6-209ENST00000557265 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.36
SNX6-209ENST00000557265 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
SNX6-209ENST00000557265 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.365e-10■■□□□ 13
SNX6-209ENST00000557265 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
SNX6-209ENST00000557265 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
SNX6-209ENST00000557265 MEGF6O75095 1541 aa17.32■□□□□ 0.36
SNX6-209ENST00000557265 CHD4Q14839 1912 aa17.32■□□□□ 0.36
SNX6-209ENST00000557265 RRS1Q15050 365 aaKnown RBP17.32■□□□□ 0.36
SNX6-209ENST00000557265 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
SNX6-209ENST00000557265 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
SNX6-209ENST00000557265 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
SNX6-209ENST00000557265 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
SNX6-209ENST00000557265 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
SNX6-209ENST00000557265 FYB1O15117 783 aa17.29■□□□□ 0.36
SNX6-209ENST00000557265 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
SNX6-209ENST00000557265 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
SNX6-209ENST00000557265 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
SNX6-209ENST00000557265 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
SNX6-209ENST00000557265 GOLGB1Q14789 3259 aaKnown RBP17.28■□□□□ 0.36
SNX6-209ENST00000557265 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
SNX6-209ENST00000557265 QSER1Q2KHR3 1735 aa17.27■□□□□ 0.35
SNX6-209ENST00000557265 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
SNX6-209ENST00000557265 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
SNX6-209ENST00000557265 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
SNX6-209ENST00000557265 COL24A1Q17RW2 1714 aa17.26■□□□□ 0.35
SNX6-209ENST00000557265 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
SNX6-209ENST00000557265 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
SNX6-209ENST00000557265 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
SNX6-209ENST00000557265 PCDH11XQ9BZA7 1347 aa17.24■□□□□ 0.35
SNX6-209ENST00000557265 PCDH11YQ9BZA8 1340 aa17.24■□□□□ 0.35
SNX6-209ENST00000557265 HMGB2P26583 209 aaKnown RBP17.24■□□□□ 0.35
SNX6-209ENST00000557265 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
SNX6-209ENST00000557265 LY75O60449 1722 aa17.24■□□□□ 0.35
SNX6-209ENST00000557265 CYP27B1O15528 508 aa17.23■□□□□ 0.35
SNX6-209ENST00000557265 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
SNX6-209ENST00000557265 SHANK3Q9BYB0 1731 aa17.22■□□□□ 0.35
SNX6-209ENST00000557265 TMF1P82094 1093 aa17.22■□□□□ 0.35
SNX6-209ENST00000557265 INSRP06213 1382 aa17.22■□□□□ 0.35
SNX6-209ENST00000557265 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
SNX6-209ENST00000557265 AK7Q96M32 723 aa17.21■□□□□ 0.35
SNX6-209ENST00000557265 FLT4P35916 1363 aa17.2■□□□□ 0.34
SNX6-209ENST00000557265 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
SNX6-209ENST00000557265 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
SNX6-209ENST00000557265 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
SNX6-209ENST00000557265 PHF14O94880 888 aa17.19■□□□□ 0.34
SNX6-209ENST00000557265 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
SNX6-209ENST00000557265 PIGBQ92521 554 aa17.19■□□□□ 0.34
SNX6-209ENST00000557265 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
SNX6-209ENST00000557265 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
SNX6-209ENST00000557265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
SNX6-209ENST00000557265 ZNF526Q8TF50 670 aaPredicted RBP17.17■□□□□ 0.34
SNX6-209ENST00000557265 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
SNX6-209ENST00000557265 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
SNX6-209ENST00000557265 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
SNX6-209ENST00000557265 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
SNX6-209ENST00000557265 CEP350Q5VT06 3117 aa17.15■□□□□ 0.34
SNX6-209ENST00000557265 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
SNX6-209ENST00000557265 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
SNX6-209ENST00000557265 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
SNX6-209ENST00000557265 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
SNX6-209ENST00000557265 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
SNX6-209ENST00000557265 SSFA2P28290 1259 aa17.14■□□□□ 0.33
SNX6-209ENST00000557265 SIK1P57059 783 aa17.14■□□□□ 0.33
SNX6-209ENST00000557265 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
SNX6-209ENST00000557265 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
SNX6-209ENST00000557265 ADCY9O60503 1353 aa17.14■□□□□ 0.33
SNX6-209ENST00000557265 C5P01031 1676 aa17.13■□□□□ 0.33
SNX6-209ENST00000557265 HSPA6P17066 643 aa17.12■□□□□ 0.33
SNX6-209ENST00000557265 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
SNX6-209ENST00000557265 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
SNX6-209ENST00000557265 NSD3Q9BZ95 1437 aa17.12■□□□□ 0.33
SNX6-209ENST00000557265 GNPATO15228 680 aa17.11■□□□□ 0.33
SNX6-209ENST00000557265 ITPK1Q13572 414 aa17.11■□□□□ 0.33
SNX6-209ENST00000557265 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
SNX6-209ENST00000557265 ATP6V1AP38606 617 aa17.1■□□□□ 0.33
SNX6-209ENST00000557265 EYA1Q99502 592 aa17.1■□□□□ 0.33
SNX6-209ENST00000557265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■■■■□ 22.3
SNX6-209ENST00000557265 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
SNX6-209ENST00000557265 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
SNX6-209ENST00000557265 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
SNX6-209ENST00000557265 MMP10P09238 476 aa17.07■□□□□ 0.32
SNX6-209ENST00000557265 PHKG2P15735 406 aa17.07■□□□□ 0.32
SNX6-209ENST00000557265 ATG3Q9NT62 314 aa17.07■□□□□ 0.32
SNX6-209ENST00000557265 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
SNX6-209ENST00000557265 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
SNX6-209ENST00000557265 KIF3CO14782 793 aa17.05■□□□□ 0.32
SNX6-209ENST00000557265 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
SNX6-209ENST00000557265 POLKQ9UBT6 870 aa17.05■□□□□ 0.32
SNX6-209ENST00000557265 TGFB2P61812 414 aa17.03■□□□□ 0.32
SNX6-209ENST00000557265 NLGN1Q8N2Q7 840 aa17.03■□□□□ 0.32
SNX6-209ENST00000557265 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms