RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TXNDC2Q86VQ3 553 aa14.02□□□□□ -0.16
SRP54-213ENST00000556994 ATP7BP35670 1465 aa14.02□□□□□ -0.16
SRP54-213ENST00000556994 ATP10DQ9P241 1426 aa14.02□□□□□ -0.17
SRP54-213ENST00000556994 CYP2E1P05181 493 aaPredicted RBP14.02□□□□□ -0.17
SRP54-213ENST00000556994 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.17
SRP54-213ENST00000556994 MIS18AQ9NYP9 233 aa14.02□□□□□ -0.17
SRP54-213ENST00000556994 MSH6P52701 1360 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 RPAP2Q8IXW5 612 aaPredicted RBP14.01□□□□□ -0.17
SRP54-213ENST00000556994 NUDT16Q96DE0 195 aaKnown RBP14.01□□□□□ -0.17
SRP54-213ENST00000556994 NEO1Q92859 1461 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 ZDHHC9Q9Y397 364 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
SRP54-213ENST00000556994 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
SRP54-213ENST00000556994 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
SRP54-213ENST00000556994 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
SRP54-213ENST00000556994 ST18O60284 1047 aa14□□□□□ -0.17
SRP54-213ENST00000556994 CASC1Q6TDU7 716 aa14□□□□□ -0.17
SRP54-213ENST00000556994 ZSCAN30Q86W11 494 aa14□□□□□ -0.17
SRP54-213ENST00000556994 PRIM1P49642 420 aaKnown RBP13.99□□□□□ -0.17
SRP54-213ENST00000556994 ZNF445P59923 1031 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 TSHZ3Q63HK5 1081 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 KIAA1211Q6ZU35 1233 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 GPT2Q8TD30 523 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 RGS12O14924 1447 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 CPS1P31327 1500 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 RRP9O43818 475 aaKnown RBP13.99□□□□□ -0.17
SRP54-213ENST00000556994 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 SLC4A10Q6U841 1118 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
SRP54-213ENST00000556994 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
SRP54-213ENST00000556994 F6X3S4 739 aa13.98□□□□□ -0.17
SRP54-213ENST00000556994 SOX12O15370 315 aa13.98□□□□□ -0.17
SRP54-213ENST00000556994 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
SRP54-213ENST00000556994 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
SRP54-213ENST00000556994 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
SRP54-213ENST00000556994 NSFL1CQ9UNZ2 370 aaKnown RBP13.98□□□□□ -0.17
SRP54-213ENST00000556994 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
SRP54-213ENST00000556994 CHL1O00533 1208 aa13.98□□□□□ -0.17
SRP54-213ENST00000556994 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
SRP54-213ENST00000556994 RICTORQ6R327 1708 aa13.97□□□□□ -0.17
SRP54-213ENST00000556994 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
SRP54-213ENST00000556994 ERC2O15083 957 aa13.97□□□□□ -0.17
SRP54-213ENST00000556994 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
SRP54-213ENST00000556994 G2E3Q7L622 706 aa13.97□□□□□ -0.17
SRP54-213ENST00000556994 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
SRP54-213ENST00000556994 REC8O95072 547 aa13.96□□□□□ -0.17
SRP54-213ENST00000556994 NEK4P51957 841 aa13.96□□□□□ -0.17
SRP54-213ENST00000556994 MLECQ14165 292 aa13.96□□□□□ -0.17
SRP54-213ENST00000556994 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.18
SRP54-213ENST00000556994 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.18
SRP54-213ENST00000556994 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.18
SRP54-213ENST00000556994 TMEM63CQ9P1W3 806 aa13.96□□□□□ -0.18
SRP54-213ENST00000556994 EXOC6BQ9Y2D4 811 aa13.96□□□□□ -0.18
SRP54-213ENST00000556994 METP08581 1390 aa13.95□□□□□ -0.18
SRP54-213ENST00000556994 SYCE3A1L190 88 aa13.95□□□□□ -0.18
SRP54-213ENST00000556994 PDE1AP54750 535 aa13.95□□□□□ -0.18
SRP54-213ENST00000556994 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
SRP54-213ENST00000556994 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRP54-213ENST00000556994 FOXO3O43524 673 aa13.95□□□□□ -0.18
SRP54-213ENST00000556994 FOXD4L6Q3SYB3 417 aaPredicted RBP13.94□□□□□ -0.18
SRP54-213ENST00000556994 FOXD4L3Q6VB84 417 aaPredicted RBP13.94□□□□□ -0.18
SRP54-213ENST00000556994 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
SRP54-213ENST00000556994 PTPRCP08575 1304 aa13.94□□□□□ -0.18
SRP54-213ENST00000556994 OFD1O75665 1012 aa13.93□□□□□ -0.18
SRP54-213ENST00000556994 TPM2P07951 284 aa13.93□□□□□ -0.18
SRP54-213ENST00000556994 TMX3Q96JJ7 454 aa13.93□□□□□ -0.18
SRP54-213ENST00000556994 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
SRP54-213ENST00000556994 PRR36Q9H6K5 1346 aa13.93□□□□□ -0.18
SRP54-213ENST00000556994 XPCQ01831 940 aaPredicted RBP13.92□□□□□ -0.18
SRP54-213ENST00000556994 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
SRP54-213ENST00000556994 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
SRP54-213ENST00000556994 HMMRO75330 724 aa13.92□□□□□ -0.18
SRP54-213ENST00000556994 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
SRP54-213ENST00000556994 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
SRP54-213ENST00000556994 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
SRP54-213ENST00000556994 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
SRP54-213ENST00000556994 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
SRP54-213ENST00000556994 RILPL2Q969X0 211 aa13.91□□□□□ -0.18
SRP54-213ENST00000556994 LRSAM1Q6UWE0 723 aa13.91□□□□□ -0.18
SRP54-213ENST00000556994 PDLIM2Q96JY6 352 aa13.91□□□□□ -0.18
SRP54-213ENST00000556994 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
SRP54-213ENST00000556994 KIAA0232Q92628 1395 aa13.9□□□□□ -0.18
SRP54-213ENST00000556994 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
SRP54-213ENST00000556994 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
SRP54-213ENST00000556994 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.18
SRP54-213ENST00000556994 ESYT1Q9BSJ8 1104 aa13.9□□□□□ -0.18
SRP54-213ENST00000556994 OSBPL3Q9H4L5 887 aa13.9□□□□□ -0.18
SRP54-213ENST00000556994 PNMA6EA0A0J9YXQ4 647 aa13.89□□□□□ -0.19
SRP54-213ENST00000556994 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
SRP54-213ENST00000556994 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
SRP54-213ENST00000556994 ANO2Q9NQ90 1003 aa13.89□□□□□ -0.19
SRP54-213ENST00000556994 TTC21BQ7Z4L5 1316 aa13.89□□□□□ -0.19
SRP54-213ENST00000556994 CRB1P82279 1406 aa13.89□□□□□ -0.19
SRP54-213ENST00000556994 GNAI2P04899 355 aa13.89□□□□□ -0.19
SRP54-213ENST00000556994 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
SRP54-213ENST00000556994 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms