RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 OVOS2A0A0G2JMS6 1433 aa21.92■■□□□ 1.1
PCNX4-213ENST00000556907 TNS2Q63HR2 1409 aa21.92■■□□□ 1.1
PCNX4-213ENST00000556907 LRRC37A3O60309 1634 aa21.91■■□□□ 1.1
PCNX4-213ENST00000556907 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
PCNX4-213ENST00000556907 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
PCNX4-213ENST00000556907 U2SURPO15042 1029 aaKnown RBP21.9■■□□□ 1.1
PCNX4-213ENST00000556907 MEGF6O75095 1541 aa21.9■■□□□ 1.1
PCNX4-213ENST00000556907 FAM196AQ6ZSG2 479 aa21.89■■□□□ 1.09
PCNX4-213ENST00000556907 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
PCNX4-213ENST00000556907 AMOTQ4VCS5 1084 aa21.88■■□□□ 1.09
PCNX4-213ENST00000556907 BCL9O00512 1426 aa21.88■■□□□ 1.09
PCNX4-213ENST00000556907 PLEKHO1Q53GL0 409 aaPredicted RBP21.86■■□□□ 1.09
PCNX4-213ENST00000556907 PNNQ9H307 717 aaKnown RBP21.86■■□□□ 1.09
PCNX4-213ENST00000556907 PCDH11XQ9BZA7 1347 aa21.85■■□□□ 1.09
PCNX4-213ENST00000556907 PCDH11YQ9BZA8 1340 aa21.85■■□□□ 1.09
PCNX4-213ENST00000556907 FCHSD2O94868 740 aa21.85■■□□□ 1.09
PCNX4-213ENST00000556907 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
PCNX4-213ENST00000556907 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
PCNX4-213ENST00000556907 MARCH10Q8NA82 808 aaPredicted RBP21.85■■□□□ 1.09
PCNX4-213ENST00000556907 PKD1L3Q7Z443 1732 aa21.84■■□□□ 1.09
PCNX4-213ENST00000556907 CCDC125Q86Z20 511 aa21.84■■□□□ 1.09
PCNX4-213ENST00000556907 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
PCNX4-213ENST00000556907 HMOX1P09601 288 aa21.83■■□□□ 1.09
PCNX4-213ENST00000556907 DDX54Q8TDD1 881 aaKnown RBP21.82■■□□□ 1.08
PCNX4-213ENST00000556907 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
PCNX4-213ENST00000556907 IFNL2Q8IZJ0 200 aa21.8■■□□□ 1.08
PCNX4-213ENST00000556907 RSPH6AQ9H0K4 717 aa21.8■■□□□ 1.08
PCNX4-213ENST00000556907 NEFMP07197 916 aa21.79■■□□□ 1.08
PCNX4-213ENST00000556907 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
PCNX4-213ENST00000556907 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCNX4-213ENST00000556907 NKX1-1Q15270 411 aaPredicted RBP21.79■■□□□ 1.08
PCNX4-213ENST00000556907 SHANK3Q9BYB0 1731 aa21.79■■□□□ 1.08
PCNX4-213ENST00000556907 SOCS7O14512 581 aa21.78■■□□□ 1.08
PCNX4-213ENST00000556907 CYP27B1O15528 508 aa21.77■■□□□ 1.08
PCNX4-213ENST00000556907 PRKAR2BP31323 418 aa21.77■■□□□ 1.08
PCNX4-213ENST00000556907 FAM182BQ5T319 152 aa21.77■■□□□ 1.08
PCNX4-213ENST00000556907 PHKG2P15735 406 aa21.76■■□□□ 1.07
PCNX4-213ENST00000556907 C1orf141Q5JVX7 400 aa21.76■■□□□ 1.07
PCNX4-213ENST00000556907 GAS2L2Q8NHY3 880 aa21.76■■□□□ 1.07
PCNX4-213ENST00000556907 SF3B2Q13435 895 aaKnown RBP21.75■■□□□ 1.07
PCNX4-213ENST00000556907 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
PCNX4-213ENST00000556907 UPF1Q92900 1129 aaKnown RBP eCLIP21.75■■□□□ 1.07
PCNX4-213ENST00000556907 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
PCNX4-213ENST00000556907 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
PCNX4-213ENST00000556907 DLG5Q8TDM6 1919 aa21.73■■□□□ 1.07
PCNX4-213ENST00000556907 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
PCNX4-213ENST00000556907 EP400Q96L91 3159 aa21.73■■□□□ 1.07
PCNX4-213ENST00000556907 SBF2Q86WG5 1849 aa21.73■■□□□ 1.07
PCNX4-213ENST00000556907 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
PCNX4-213ENST00000556907 DCAF5Q96JK2 942 aa21.72■■□□□ 1.07
PCNX4-213ENST00000556907 TRIM37O94972 964 aa21.71■■□□□ 1.07
PCNX4-213ENST00000556907 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
PCNX4-213ENST00000556907 ADAMTS8Q9UP79 889 aa21.7■■□□□ 1.06
PCNX4-213ENST00000556907 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
PCNX4-213ENST00000556907 KAT6BQ8WYB5 2073 aa21.7■■□□□ 1.06
PCNX4-213ENST00000556907 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
PCNX4-213ENST00000556907 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
PCNX4-213ENST00000556907 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
PCNX4-213ENST00000556907 VIRMAQ69YN4 1812 aaKnown RBP21.67■■□□□ 1.06
PCNX4-213ENST00000556907 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
PCNX4-213ENST00000556907 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
PCNX4-213ENST00000556907 BAG6P46379 1132 aa21.67■■□□□ 1.06
PCNX4-213ENST00000556907 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
PCNX4-213ENST00000556907 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
PCNX4-213ENST00000556907 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
PCNX4-213ENST00000556907 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
PCNX4-213ENST00000556907 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
PCNX4-213ENST00000556907 PLSCR1O15162 318 aa21.65■■□□□ 1.06
PCNX4-213ENST00000556907 DOT1LQ8TEK3 1739 aa21.65■■□□□ 1.06
PCNX4-213ENST00000556907 TNS1Q9HBL0 1735 aaKnown RBP21.64■■□□□ 1.06
PCNX4-213ENST00000556907 KCNQ2O43526 872 aa21.64■■□□□ 1.05
PCNX4-213ENST00000556907 APBA3O96018 575 aa21.64■■□□□ 1.05
PCNX4-213ENST00000556907 SYTL4Q96C24 671 aaPredicted RBP21.64■■□□□ 1.05
PCNX4-213ENST00000556907 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
PCNX4-213ENST00000556907 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
PCNX4-213ENST00000556907 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
PCNX4-213ENST00000556907 TMOD3Q9NYL9 352 aa21.62■■□□□ 1.05
PCNX4-213ENST00000556907 KDM6AO15550 1401 aaPredicted RBP21.62■■□□□ 1.05
PCNX4-213ENST00000556907 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
PCNX4-213ENST00000556907 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
PCNX4-213ENST00000556907 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
PCNX4-213ENST00000556907 CABP4P57796 275 aa21.61■■□□□ 1.05
PCNX4-213ENST00000556907 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
PCNX4-213ENST00000556907 ITGB4P16144 1822 aa21.6■■□□□ 1.05
PCNX4-213ENST00000556907 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
PCNX4-213ENST00000556907 LMOD3Q0VAK6 560 aa21.6■■□□□ 1.05
PCNX4-213ENST00000556907 TOGARAM1Q9Y4F4 1720 aa21.6■■□□□ 1.05
PCNX4-213ENST00000556907 RGPD3A6NKT7 1758 aaPredicted RBP21.59■■□□□ 1.05
PCNX4-213ENST00000556907 RGPD4Q7Z3J3 1758 aa21.59■■□□□ 1.05
PCNX4-213ENST00000556907 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
PCNX4-213ENST00000556907 BTAF1O14981 1849 aa21.59■■□□□ 1.05
PCNX4-213ENST00000556907 ZBED9Q6R2W3 1325 aa21.58■■□□□ 1.05
PCNX4-213ENST00000556907 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
PCNX4-213ENST00000556907 CCDC146Q8IYE0 955 aa21.58■■□□□ 1.05
PCNX4-213ENST00000556907 PIGBQ92521 554 aa21.58■■□□□ 1.05
PCNX4-213ENST00000556907 SLC52A2Q9HAB3 445 aa21.58■■□□□ 1.05
PCNX4-213ENST00000556907 LGR6Q9HBX8 967 aa21.58■■□□□ 1.05
PCNX4-213ENST00000556907 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
PCNX4-213ENST00000556907 PTF1AQ7RTS3 328 aa21.57■■□□□ 1.04
PCNX4-213ENST00000556907 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms