RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 PPP1R9BQ96SB3 815 aa21.71■■□□□ 1.07
RCCD1-204ENST00000555737 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
RCCD1-204ENST00000555737 MSH6P52701 1360 aa21.71■■□□□ 1.07
RCCD1-204ENST00000555737 ANKRD44Q8N8A2 993 aa21.71■■□□□ 1.07
RCCD1-204ENST00000555737 JARID2Q92833 1246 aaPredicted RBP21.71■■□□□ 1.07
RCCD1-204ENST00000555737 REC8O95072 547 aa21.7■■□□□ 1.06
RCCD1-204ENST00000555737 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
RCCD1-204ENST00000555737 TPM2P07951 284 aa21.7■■□□□ 1.06
RCCD1-204ENST00000555737 NCBP3Q53F19 620 aaKnown RBP21.7■■□□□ 1.06
RCCD1-204ENST00000555737 CAMSAP1Q5T5Y3 1602 aa21.7■■□□□ 1.06
RCCD1-204ENST00000555737 UQCRHLA0A096LP55 91 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 ERC2O15083 957 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 UQCRHP07919 91 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 PALD1Q9ULE6 856 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 TMX3Q96JJ7 454 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 PUS7Q96PZ0 661 aaKnown RBP21.69■■□□□ 1.06
RCCD1-204ENST00000555737 IL1RAPL2Q9NP60 686 aa21.69■■□□□ 1.06
RCCD1-204ENST00000555737 UHRF1BP1LA0JNW5 1464 aa21.68■■□□□ 1.06
RCCD1-204ENST00000555737 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
RCCD1-204ENST00000555737 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.68■■□□□ 1.06
RCCD1-204ENST00000555737 KIDINS220Q9ULH0 1771 aa21.68■■□□□ 1.06
RCCD1-204ENST00000555737 OFD1O75665 1012 aa21.68■■□□□ 1.06
RCCD1-204ENST00000555737 TSC1Q92574 1164 aa21.68■■□□□ 1.06
RCCD1-204ENST00000555737 FAM135BQ49AJ0 1406 aa21.67■■□□□ 1.06
RCCD1-204ENST00000555737 FAM177BA6PVY3 158 aa21.67■■□□□ 1.06
RCCD1-204ENST00000555737 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
RCCD1-204ENST00000555737 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
RCCD1-204ENST00000555737 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
RCCD1-204ENST00000555737 CD163L1Q9NR16 1453 aa21.65■■□□□ 1.06
RCCD1-204ENST00000555737 ZNF445P59923 1031 aa21.65■■□□□ 1.06
RCCD1-204ENST00000555737 C17orf53Q8N3J3 647 aaPredicted RBP21.65■■□□□ 1.06
RCCD1-204ENST00000555737 CFAP74Q9C0B2 1584 aa21.65■■□□□ 1.06
RCCD1-204ENST00000555737 DDX54Q8TDD1 881 aaKnown RBP21.64■■□□□ 1.06
RCCD1-204ENST00000555737 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.06
RCCD1-204ENST00000555737 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.06
RCCD1-204ENST00000555737 GADD45BO75293 160 aaPredicted RBP21.64■■□□□ 1.05
RCCD1-204ENST00000555737 PDE1AP54750 535 aa21.64■■□□□ 1.05
RCCD1-204ENST00000555737 POGZQ7Z3K3 1410 aa21.64■■□□□ 1.05
RCCD1-204ENST00000555737 RPAP2Q8IXW5 612 aaPredicted RBP21.64■■□□□ 1.05
RCCD1-204ENST00000555737 IFT172Q9UG01 1749 aa21.64■■□□□ 1.05
RCCD1-204ENST00000555737 TSPYL4Q9UJ04 414 aa21.64■■□□□ 1.05
RCCD1-204ENST00000555737 PRDM10Q9NQV6 1147 aa21.64■■□□□ 1.05
RCCD1-204ENST00000555737 FKBP5Q13451 457 aaPredicted RBP21.63■■□□□ 1.05
RCCD1-204ENST00000555737 CHMP3Q9Y3E7 222 aa21.63■■□□□ 1.05
RCCD1-204ENST00000555737 PPLO60437 1756 aa21.63■■□□□ 1.05
RCCD1-204ENST00000555737 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
RCCD1-204ENST00000555737 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
RCCD1-204ENST00000555737 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
RCCD1-204ENST00000555737 NUTM1Q86Y26 1132 aa21.62■■□□□ 1.05
RCCD1-204ENST00000555737 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
RCCD1-204ENST00000555737 HMMRO75330 724 aa21.62■■□□□ 1.05
RCCD1-204ENST00000555737 EIF4A2Q14240 407 aaKnown RBP21.62■■□□□ 1.05
RCCD1-204ENST00000555737 MED14O60244 1454 aa21.62■■□□□ 1.05
RCCD1-204ENST00000555737 BRPF1P55201 1214 aaPredicted RBP21.61■■□□□ 1.05
RCCD1-204ENST00000555737 LRSAM1Q6UWE0 723 aa21.61■■□□□ 1.05
RCCD1-204ENST00000555737 LTV1Q96GA3 475 aaPredicted RBP21.61■■□□□ 1.05
RCCD1-204ENST00000555737 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.61■■□□□ 1.05
RCCD1-204ENST00000555737 CYP2E1P05181 493 aaPredicted RBP21.61■■□□□ 1.05
RCCD1-204ENST00000555737 RTF1Q92541 710 aaKnown RBP21.61■■□□□ 1.05
RCCD1-204ENST00000555737 PDCL3Q9H2J4 239 aa21.61■■□□□ 1.05
RCCD1-204ENST00000555737 ZC3H13Q5T200 1668 aaKnown RBP21.61■■□□□ 1.05
RCCD1-204ENST00000555737 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
RCCD1-204ENST00000555737 UNC5CLQ8IV45 518 aa21.6■■□□□ 1.05
RCCD1-204ENST00000555737 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
RCCD1-204ENST00000555737 ABCC3O15438 1527 aa21.6■■□□□ 1.05
RCCD1-204ENST00000555737 RTL1A6NKG5 1358 aa21.6■■□□□ 1.05
RCCD1-204ENST00000555737 ARHGEF28Q8N1W1 1705 aaKnown RBP21.59■■□□□ 1.05
RCCD1-204ENST00000555737 NOL7Q9UMY1 257 aaKnown RBP21.59■■□□□ 1.05
RCCD1-204ENST00000555737 PNMA6EA0A0J9YXQ4 647 aa21.59■■□□□ 1.05
RCCD1-204ENST00000555737 WASLO00401 505 aaPredicted RBP21.59■■□□□ 1.05
RCCD1-204ENST00000555737 USP25Q9UHP3 1055 aa21.59■■□□□ 1.05
RCCD1-204ENST00000555737 ZKSCAN5Q9Y2L8 839 aa21.58■■□□□ 1.05
RCCD1-204ENST00000555737 CPA1P15085 419 aa21.58■■□□□ 1.04
RCCD1-204ENST00000555737 MCCP23508 829 aa21.57■■□□□ 1.04
RCCD1-204ENST00000555737 PTPRMP28827 1452 aa21.57■■□□□ 1.04
RCCD1-204ENST00000555737 TSPY26PQ9H489 355 aa21.57■■□□□ 1.04
RCCD1-204ENST00000555737 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
RCCD1-204ENST00000555737 FIBPO43427 364 aa21.56■■□□□ 1.04
RCCD1-204ENST00000555737 STK31Q9BXU1 1019 aa21.56■■□□□ 1.04
RCCD1-204ENST00000555737 TTC12Q9H892 705 aaPredicted RBP21.56■■□□□ 1.04
RCCD1-204ENST00000555737 PIK3R4Q99570 1358 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 MX1P20591 662 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 CLEC17AQ6ZS10 378 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 ESYT1Q9BSJ8 1104 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 YEATS2Q9ULM3 1422 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 IL25Q9H293 177 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
RCCD1-204ENST00000555737 USP48Q86UV5 1035 aa21.54■■□□□ 1.04
RCCD1-204ENST00000555737 LRRFIP2Q9Y608 721 aaKnown RBP21.54■■□□□ 1.04
RCCD1-204ENST00000555737 USP32Q8NFA0 1604 aa21.54■■□□□ 1.04
RCCD1-204ENST00000555737 GNAI2P04899 355 aa21.54■■□□□ 1.04
RCCD1-204ENST00000555737 CCDC61Q9Y6R9 512 aa21.54■■□□□ 1.04
RCCD1-204ENST00000555737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.54■■□□□ 1.04
RCCD1-204ENST00000555737 CCDC39Q9UFE4 941 aa21.53■■□□□ 1.04
RCCD1-204ENST00000555737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.53■■□□□ 1.04
RCCD1-204ENST00000555737 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
RCCD1-204ENST00000555737 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms