RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
ACTN1-215ENST00000555616 DOT1LQ8TEK3 1739 aa13.14□□□□□ -0.31
ACTN1-215ENST00000555616 PPM1GO15355 546 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-215ENST00000555616 KCNQ2O43526 872 aa13.14□□□□□ -0.31
ACTN1-215ENST00000555616 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
ACTN1-215ENST00000555616 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-215ENST00000555616 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
ACTN1-215ENST00000555616 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
ACTN1-215ENST00000555616 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
ACTN1-215ENST00000555616 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-215ENST00000555616 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
ACTN1-215ENST00000555616 BTAF1O14981 1849 aa13.13□□□□□ -0.31
ACTN1-215ENST00000555616 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
ACTN1-215ENST00000555616 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-215ENST00000555616 MORC1Q86VD1 984 aa13.12□□□□□ -0.31
ACTN1-215ENST00000555616 ACSBG1Q96GR2 724 aa13.12□□□□□ -0.31
ACTN1-215ENST00000555616 PAPPAQ13219 1627 aa13.12□□□□□ -0.31
ACTN1-215ENST00000555616 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
ACTN1-215ENST00000555616 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
ACTN1-215ENST00000555616 NPC1L1Q9UHC9 1359 aa13.11□□□□□ -0.31
ACTN1-215ENST00000555616 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-215ENST00000555616 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
ACTN1-215ENST00000555616 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
ACTN1-215ENST00000555616 PROM2Q8N271 834 aa13.11□□□□□ -0.31
ACTN1-215ENST00000555616 EYA1Q99502 592 aa13.11□□□□□ -0.31
ACTN1-215ENST00000555616 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-215ENST00000555616 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
ACTN1-215ENST00000555616 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
ACTN1-215ENST00000555616 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
ACTN1-215ENST00000555616 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
ACTN1-215ENST00000555616 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
ACTN1-215ENST00000555616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.327e-7■■■□□ 15.2
ACTN1-215ENST00000555616 CYP27B1O15528 508 aa13.07□□□□□ -0.32
ACTN1-215ENST00000555616 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
ACTN1-215ENST00000555616 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
ACTN1-215ENST00000555616 KDRP35968 1356 aa13.06□□□□□ -0.32
ACTN1-215ENST00000555616 LY75O60449 1722 aa13.05□□□□□ -0.32
ACTN1-215ENST00000555616 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-215ENST00000555616 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-215ENST00000555616 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
ACTN1-215ENST00000555616 SLC27A3Q5K4L6 730 aa13.04□□□□□ -0.32
ACTN1-215ENST00000555616 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
ACTN1-215ENST00000555616 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-215ENST00000555616 IL13P35225 146 aa13.03□□□□□ -0.32
ACTN1-215ENST00000555616 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
ACTN1-215ENST00000555616 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
ACTN1-215ENST00000555616 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
ACTN1-215ENST00000555616 PHKG2P15735 406 aa13.02□□□□□ -0.33
ACTN1-215ENST00000555616 MTHFSP49914 203 aa13.02□□□□□ -0.33
ACTN1-215ENST00000555616 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
ACTN1-215ENST00000555616 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
ACTN1-215ENST00000555616 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
ACTN1-215ENST00000555616 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
ACTN1-215ENST00000555616 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
ACTN1-215ENST00000555616 AKT1S1Q96B36 256 aa13□□□□□ -0.33
ACTN1-215ENST00000555616 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
ACTN1-215ENST00000555616 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-215ENST00000555616 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
ACTN1-215ENST00000555616 ITGB4P16144 1822 aa12.99□□□□□ -0.33
ACTN1-215ENST00000555616 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-215ENST00000555616 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-215ENST00000555616 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
ACTN1-215ENST00000555616 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
ACTN1-215ENST00000555616 PIGBQ92521 554 aa12.98□□□□□ -0.33
ACTN1-215ENST00000555616 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-215ENST00000555616 C5P01031 1676 aa12.98□□□□□ -0.33
ACTN1-215ENST00000555616 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
ACTN1-215ENST00000555616 ZNF530Q6P9A1 599 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-215ENST00000555616 SMARCC1Q92922 1105 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-215ENST00000555616 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
ACTN1-215ENST00000555616 KCNQ4P56696 695 aa12.96□□□□□ -0.33
ACTN1-215ENST00000555616 DCAF5Q96JK2 942 aa12.96□□□□□ -0.33
ACTN1-215ENST00000555616 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
ACTN1-215ENST00000555616 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.33
ACTN1-215ENST00000555616 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
ACTN1-215ENST00000555616 ANP32CO43423 234 aa12.95□□□□□ -0.34
ACTN1-215ENST00000555616 ZBTB7AO95365 584 aa12.95□□□□□ -0.34
ACTN1-215ENST00000555616 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
ACTN1-215ENST00000555616 KAT6BQ8WYB5 2073 aa12.94□□□□□ -0.34
ACTN1-215ENST00000555616 MRC1P22897 1456 aa12.94□□□□□ -0.34
ACTN1-215ENST00000555616 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
ACTN1-215ENST00000555616 HMGB2P26583 209 aaKnown RBP12.94□□□□□ -0.34
ACTN1-215ENST00000555616 PTGER2P43116 358 aa12.94□□□□□ -0.34
ACTN1-215ENST00000555616 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 TAF1LQ8IZX4 1826 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-215ENST00000555616 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
ACTN1-215ENST00000555616 HMOX1P09601 288 aa12.92□□□□□ -0.34
ACTN1-215ENST00000555616 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
ACTN1-215ENST00000555616 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
ACTN1-215ENST00000555616 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
ACTN1-215ENST00000555616 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
ACTN1-215ENST00000555616 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-215ENST00000555616 ASAP1Q9ULH1 1129 aa12.92□□□□□ -0.34
ACTN1-215ENST00000555616 LOC102724428A0A0B4J2F2 783 aa12.91□□□□□ -0.34
ACTN1-215ENST00000555616 SIK1P57059 783 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms