RNA–Protein interactions for RNA: ENST00000555412.1

SRSF5-210, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-210ENST00000555412 A0A0G2JS52 829 aa18.38■□□□□ 0.53
SRSF5-210ENST00000555412 MYT1Q01538 1121 aa18.38■□□□□ 0.53
SRSF5-210ENST00000555412 DDB1Q16531 1140 aa18.38■□□□□ 0.53
SRSF5-210ENST00000555412 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
SRSF5-210ENST00000555412 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
SRSF5-210ENST00000555412 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
SRSF5-210ENST00000555412 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
SRSF5-210ENST00000555412 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
SRSF5-210ENST00000555412 MEGF6O75095 1541 aa18.38■□□□□ 0.53
SRSF5-210ENST00000555412 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
SRSF5-210ENST00000555412 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
SRSF5-210ENST00000555412 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
SRSF5-210ENST00000555412 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
SRSF5-210ENST00000555412 RGS12O14924 1447 aa18.35■□□□□ 0.53
SRSF5-210ENST00000555412 PDE3BQ13370 1112 aa18.35■□□□□ 0.53
SRSF5-210ENST00000555412 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
SRSF5-210ENST00000555412 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
SRSF5-210ENST00000555412 PKD1L3Q7Z443 1732 aa18.34■□□□□ 0.53
SRSF5-210ENST00000555412 LRRC37A3O60309 1634 aa18.34■□□□□ 0.53
SRSF5-210ENST00000555412 TNS2Q63HR2 1409 aa18.33■□□□□ 0.53
SRSF5-210ENST00000555412 KRT27Q7Z3Y8 459 aa18.33■□□□□ 0.52
SRSF5-210ENST00000555412 PLEKHF1Q96S99 279 aa18.32■□□□□ 0.52
SRSF5-210ENST00000555412 NEFMP07197 916 aa18.31■□□□□ 0.52
SRSF5-210ENST00000555412 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
SRSF5-210ENST00000555412 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
SRSF5-210ENST00000555412 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
SRSF5-210ENST00000555412 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
SRSF5-210ENST00000555412 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
SRSF5-210ENST00000555412 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
SRSF5-210ENST00000555412 CYP27B1O15528 508 aa18.29■□□□□ 0.52
SRSF5-210ENST00000555412 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
SRSF5-210ENST00000555412 IFNL2Q8IZJ0 200 aa18.29■□□□□ 0.52
SRSF5-210ENST00000555412 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
SRSF5-210ENST00000555412 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
SRSF5-210ENST00000555412 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
SRSF5-210ENST00000555412 PHKG2P15735 406 aa18.27■□□□□ 0.52
SRSF5-210ENST00000555412 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
SRSF5-210ENST00000555412 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
SRSF5-210ENST00000555412 MAPK8IP3Q9UPT6 1336 aa18.26■□□□□ 0.51
SRSF5-210ENST00000555412 AKAP4Q5JQC9 854 aa18.26■□□□□ 0.51
SRSF5-210ENST00000555412 C1orf141Q5JVX7 400 aa18.26■□□□□ 0.51
SRSF5-210ENST00000555412 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
SRSF5-210ENST00000555412 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
SRSF5-210ENST00000555412 BCL9O00512 1426 aa18.25■□□□□ 0.51
SRSF5-210ENST00000555412 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
SRSF5-210ENST00000555412 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
SRSF5-210ENST00000555412 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
SRSF5-210ENST00000555412 ILDR2Q71H61 639 aa18.24■□□□□ 0.51
SRSF5-210ENST00000555412 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
SRSF5-210ENST00000555412 DLG5Q8TDM6 1919 aa18.22■□□□□ 0.51
SRSF5-210ENST00000555412 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
SRSF5-210ENST00000555412 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
SRSF5-210ENST00000555412 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
SRSF5-210ENST00000555412 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
SRSF5-210ENST00000555412 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
SRSF5-210ENST00000555412 MAP3K5Q99683 1374 aa18.2■□□□□ 0.5
SRSF5-210ENST00000555412 APAF1O14727 1248 aa18.2■□□□□ 0.5
SRSF5-210ENST00000555412 VIRMAQ69YN4 1812 aaKnown RBP18.2■□□□□ 0.5
SRSF5-210ENST00000555412 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
SRSF5-210ENST00000555412 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
SRSF5-210ENST00000555412 RIPK4P57078 832 aa18.19■□□□□ 0.5
SRSF5-210ENST00000555412 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
SRSF5-210ENST00000555412 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
SRSF5-210ENST00000555412 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
SRSF5-210ENST00000555412 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
SRSF5-210ENST00000555412 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
SRSF5-210ENST00000555412 EP400Q96L91 3159 aa18.17■□□□□ 0.5
SRSF5-210ENST00000555412 IL17REQ8NFR9 667 aa18.17■□□□□ 0.5
SRSF5-210ENST00000555412 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
SRSF5-210ENST00000555412 ITGB4P16144 1822 aa18.16■□□□□ 0.5
SRSF5-210ENST00000555412 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
SRSF5-210ENST00000555412 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
SRSF5-210ENST00000555412 LMOD3Q0VAK6 560 aa18.16■□□□□ 0.5
SRSF5-210ENST00000555412 NEUROD2Q15784 382 aa18.16■□□□□ 0.5
SRSF5-210ENST00000555412 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
SRSF5-210ENST00000555412 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
SRSF5-210ENST00000555412 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
SRSF5-210ENST00000555412 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
SRSF5-210ENST00000555412 TRIM37O94972 964 aa18.15■□□□□ 0.5
SRSF5-210ENST00000555412 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
SRSF5-210ENST00000555412 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
SRSF5-210ENST00000555412 KCNQ2O43526 872 aa18.14■□□□□ 0.49
SRSF5-210ENST00000555412 CABP4P57796 275 aa18.14■□□□□ 0.49
SRSF5-210ENST00000555412 CCDC125Q86Z20 511 aa18.14■□□□□ 0.49
SRSF5-210ENST00000555412 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
SRSF5-210ENST00000555412 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
SRSF5-210ENST00000555412 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
SRSF5-210ENST00000555412 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
SRSF5-210ENST00000555412 DCTN1Q14203 1278 aa18.12■□□□□ 0.49
SRSF5-210ENST00000555412 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
SRSF5-210ENST00000555412 MCM10Q7L590 875 aa18.12■□□□□ 0.49
SRSF5-210ENST00000555412 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
SRSF5-210ENST00000555412 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
SRSF5-210ENST00000555412 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
SRSF5-210ENST00000555412 TEFQ10587 303 aa18.11■□□□□ 0.49
SRSF5-210ENST00000555412 PTF1AQ7RTS3 328 aa18.11■□□□□ 0.49
SRSF5-210ENST00000555412 PIGBQ92521 554 aa18.11■□□□□ 0.49
SRSF5-210ENST00000555412 BTAF1O14981 1849 aa18.09■□□□□ 0.49
SRSF5-210ENST00000555412 MRC1P22897 1456 aa18.09■□□□□ 0.49
SRSF5-210ENST00000555412 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms