RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 PHF8Q9UPP1 1060 aa26.79■■□□□ 1.88
ARHGEF40-204ENST00000555038 MCM10Q7L590 875 aa26.78■■□□□ 1.88
ARHGEF40-204ENST00000555038 PTPRCP08575 1304 aa26.78■■□□□ 1.88
ARHGEF40-204ENST00000555038 SEC24BO95487 1268 aa26.77■■□□□ 1.88
ARHGEF40-204ENST00000555038 HOXC9P31274 260 aa26.77■■□□□ 1.88
ARHGEF40-204ENST00000555038 MTHFSDQ2M296 383 aaKnown RBP26.77■■□□□ 1.88
ARHGEF40-204ENST00000555038 INTS3Q68E01 1043 aaKnown RBP26.76■■□□□ 1.88
ARHGEF40-204ENST00000555038 LRRC37A3O60309 1634 aa26.76■■□□□ 1.87
ARHGEF40-204ENST00000555038 ABTB2Q8N961 1025 aa26.76■■□□□ 1.87
ARHGEF40-204ENST00000555038 TBC1D32Q96NH3 1257 aa26.76■■□□□ 1.87
ARHGEF40-204ENST00000555038 BECN1Q14457 450 aa26.75■■□□□ 1.87
ARHGEF40-204ENST00000555038 NWD1Q149M9 1564 aa26.74■■□□□ 1.87
ARHGEF40-204ENST00000555038 CHD1LQ86WJ1 897 aa26.74■■□□□ 1.87
ARHGEF40-204ENST00000555038 NPHP4O75161 1426 aaPredicted RBP26.72■■□□□ 1.87
ARHGEF40-204ENST00000555038 SOS1Q07889 1333 aaPredicted RBP26.72■■□□□ 1.87
ARHGEF40-204ENST00000555038 BABAM1Q9NWV8 329 aa26.71■■□□□ 1.87
ARHGEF40-204ENST00000555038 RGS12O14924 1447 aa26.71■■□□□ 1.87
ARHGEF40-204ENST00000555038 PHRF1Q9P1Y6 1649 aaKnown RBP26.7■■□□□ 1.86
ARHGEF40-204ENST00000555038 TSPYL4Q9UJ04 414 aa26.69■■□□□ 1.86
ARHGEF40-204ENST00000555038 NFAT5O94916 1531 aa26.68■■□□□ 1.86
ARHGEF40-204ENST00000555038 GNAT3A8MTJ3 354 aa26.67■■□□□ 1.86
ARHGEF40-204ENST00000555038 LTN1O94822 1766 aa26.67■■□□□ 1.86
ARHGEF40-204ENST00000555038 FOXO3O43524 673 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 SLC4A3P48751 1232 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 BMP2KLQ5H9B9 411 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 KCNH5Q8NCM2 988 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 SIRT2Q8IXJ6 389 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 LNPKQ9C0E8 428 aa26.66■■□□□ 1.86
ARHGEF40-204ENST00000555038 MAP3K5Q99683 1374 aa26.65■■□□□ 1.86
ARHGEF40-204ENST00000555038 IP6K1Q92551 441 aa26.65■■□□□ 1.86
ARHGEF40-204ENST00000555038 KRT24Q2M2I5 525 aa26.64■■□□□ 1.86
ARHGEF40-204ENST00000555038 RPAP2Q8IXW5 612 aaPredicted RBP26.64■■□□□ 1.86
ARHGEF40-204ENST00000555038 C1orf115Q9H7X2 142 aa26.63■■□□□ 1.85
ARHGEF40-204ENST00000555038 ANKRD45Q5TZF3 282 aa26.63■■□□□ 1.85
ARHGEF40-204ENST00000555038 NUTM2GQ5VZR2 741 aa26.63■■□□□ 1.85
ARHGEF40-204ENST00000555038 PSME1Q06323 249 aa26.61■■□□□ 1.85
ARHGEF40-204ENST00000555038 DEKP35659 375 aaKnown RBP26.61■■□□□ 1.85
ARHGEF40-204ENST00000555038 ANKRD44Q8N8A2 993 aa26.61■■□□□ 1.85
ARHGEF40-204ENST00000555038 DCTPP1Q9H773 170 aa26.61■■□□□ 1.85
ARHGEF40-204ENST00000555038 ATP10DQ9P241 1426 aa26.6■■□□□ 1.85
ARHGEF40-204ENST00000555038 SLC4A2P04920 1241 aa26.6■■□□□ 1.85
ARHGEF40-204ENST00000555038 C22orf23Q9BZE7 217 aa26.6■■□□□ 1.85
ARHGEF40-204ENST00000555038 EIF5BO60841 1220 aaKnown RBP26.59■■□□□ 1.85
ARHGEF40-204ENST00000555038 ESCO1Q5FWF5 840 aa26.59■■□□□ 1.85
ARHGEF40-204ENST00000555038 C14orf37Q86TY3 774 aa26.59■■□□□ 1.85
ARHGEF40-204ENST00000555038 CCT4P50991 539 aaKnown RBP26.58■■□□□ 1.85
ARHGEF40-204ENST00000555038 MSH6P52701 1360 aa26.58■■□□□ 1.85
ARHGEF40-204ENST00000555038 CACNA1FO60840 1977 aa26.58■■□□□ 1.84
ARHGEF40-204ENST00000555038 SLIT3O75094 1523 aa26.57■■□□□ 1.84
ARHGEF40-204ENST00000555038 STK31Q9BXU1 1019 aa26.57■■□□□ 1.84
ARHGEF40-204ENST00000555038 FAM208AQ9UK61 1670 aaKnown RBP26.56■■□□□ 1.84
ARHGEF40-204ENST00000555038 TAF7Q15545 349 aaPredicted RBP26.56■■□□□ 1.84
ARHGEF40-204ENST00000555038 NFKBIBQ15653 356 aa26.56■■□□□ 1.84
ARHGEF40-204ENST00000555038 CCDC30Q5VVM6 783 aa26.56■■□□□ 1.84
ARHGEF40-204ENST00000555038 MIS18AQ9NYP9 233 aa26.56■■□□□ 1.84
ARHGEF40-204ENST00000555038 KIF1AQ12756 1690 aa26.55■■□□□ 1.84
ARHGEF40-204ENST00000555038 MFAP1P55081 439 aaKnown RBP26.54■■□□□ 1.84
ARHGEF40-204ENST00000555038 CEP85Q6P2H3 762 aa26.53■■□□□ 1.84
ARHGEF40-204ENST00000555038 IL17REQ8NFR9 667 aa26.53■■□□□ 1.84
ARHGEF40-204ENST00000555038 MED1Q15648 1581 aaPredicted RBP26.53■■□□□ 1.84
ARHGEF40-204ENST00000555038 LTV1Q96GA3 475 aaPredicted RBP26.53■■□□□ 1.84
ARHGEF40-204ENST00000555038 CHMP4AQ9BY43 222 aa26.53■■□□□ 1.84
ARHGEF40-204ENST00000555038 CEMIPQ8WUJ3 1361 aa26.52■■□□□ 1.84
ARHGEF40-204ENST00000555038 RBM25P49756 843 aaKnown RBP26.52■■□□□ 1.84
ARHGEF40-204ENST00000555038 MST1RQ04912 1400 aa26.52■■□□□ 1.84
ARHGEF40-204ENST00000555038 NCAPD2Q15021 1401 aa26.52■■□□□ 1.84
ARHGEF40-204ENST00000555038 HMMRO75330 724 aa26.51■■□□□ 1.83
ARHGEF40-204ENST00000555038 N4BP2Q86UW6 1770 aaPredicted RBP26.51■■□□□ 1.83
ARHGEF40-204ENST00000555038 PXDNLA1KZ92 1463 aa26.5■■□□□ 1.83
ARHGEF40-204ENST00000555038 TBC1D2Q9BYX2 928 aa26.5■■□□□ 1.83
ARHGEF40-204ENST00000555038 TRPM3Q9HCF6 1732 aaPredicted RBP26.49■■□□□ 1.83
ARHGEF40-204ENST00000555038 RBM33Q96EV2 1170 aaKnown RBP26.48■■□□□ 1.83
ARHGEF40-204ENST00000555038 LMO7Q8WWI1 1683 aa26.48■■□□□ 1.83
ARHGEF40-204ENST00000555038 MEIS3Q99687 375 aa26.48■■□□□ 1.83
ARHGEF40-204ENST00000555038 NBPF6Q5VWK0 638 aa26.47■■□□□ 1.83
ARHGEF40-204ENST00000555038 G2E3Q7L622 706 aa26.47■■□□□ 1.83
ARHGEF40-204ENST00000555038 NBPF4Q96M43 638 aa26.47■■□□□ 1.83
ARHGEF40-204ENST00000555038 HOXB7P09629 217 aa26.46■■□□□ 1.83
ARHGEF40-204ENST00000555038 FLIIQ13045 1269 aa26.46■■□□□ 1.83
ARHGEF40-204ENST00000555038 ARHGEF25Q86VW2 580 aa26.46■■□□□ 1.83
ARHGEF40-204ENST00000555038 OVOS2A0A0G2JMS6 1433 aa26.46■■□□□ 1.83
ARHGEF40-204ENST00000555038 CAMTA1Q9Y6Y1 1673 aa26.45■■□□□ 1.83
ARHGEF40-204ENST00000555038 GCP02774 474 aa26.45■■□□□ 1.82
ARHGEF40-204ENST00000555038 AMOTQ4VCS5 1084 aa26.45■■□□□ 1.82
ARHGEF40-204ENST00000555038 PLEKHM2Q8IWE5 1019 aa26.45■■□□□ 1.82
ARHGEF40-204ENST00000555038 LMTK3Q96Q04 1460 aa26.44■■□□□ 1.82
ARHGEF40-204ENST00000555038 CDC45O75419 566 aa26.44■■□□□ 1.82
ARHGEF40-204ENST00000555038 ORAI2Q96SN7 254 aa26.44■■□□□ 1.82
ARHGEF40-204ENST00000555038 C1orf167Q5SNV9 1468 aa26.44■■□□□ 1.82
ARHGEF40-204ENST00000555038 GNAI3P08754 354 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 AKAP4Q5JQC9 854 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 USHBP1Q8N6Y0 703 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 ANTXR1Q9H6X2 564 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 KDM3BQ7LBC6 1761 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 GNAI2P04899 355 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 PLEKHO1Q53GL0 409 aaPredicted RBP26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 PROSER2Q86WR7 435 aaPredicted RBP26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 C19orf44Q9H6X5 657 aa26.43■■□□□ 1.82
ARHGEF40-204ENST00000555038 NCOA3Q9Y6Q9 1424 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms