RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 RTL1A6NKG5 1358 aa17.11■□□□□ 0.33
MTHFD1-207ENST00000554677 DOT1LQ8TEK3 1739 aa17.1■□□□□ 0.33
MTHFD1-207ENST00000554677 YY1P25490 414 aa17.1■□□□□ 0.33
MTHFD1-207ENST00000554677 NSD2O96028 1365 aa17.1■□□□□ 0.33
MTHFD1-207ENST00000554677 LY75O60449 1722 aa17.1■□□□□ 0.33
MTHFD1-207ENST00000554677 KCNQ4P56696 695 aa17.09■□□□□ 0.33
MTHFD1-207ENST00000554677 HSP90AB2PQ58FF8 381 aa17.09■□□□□ 0.33
MTHFD1-207ENST00000554677 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
MTHFD1-207ENST00000554677 SYT17Q9BSW7 474 aa17.09■□□□□ 0.33
MTHFD1-207ENST00000554677 QSER1Q2KHR3 1735 aa17.09■□□□□ 0.33
MTHFD1-207ENST00000554677 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
MTHFD1-207ENST00000554677 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.32
MTHFD1-207ENST00000554677 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
MTHFD1-207ENST00000554677 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
MTHFD1-207ENST00000554677 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
MTHFD1-207ENST00000554677 INSRP06213 1382 aa17.06■□□□□ 0.32
MTHFD1-207ENST00000554677 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
MTHFD1-207ENST00000554677 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
MTHFD1-207ENST00000554677 TIMELESSQ9UNS1 1208 aa17.06■□□□□ 0.32
MTHFD1-207ENST00000554677 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
MTHFD1-207ENST00000554677 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
MTHFD1-207ENST00000554677 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
MTHFD1-207ENST00000554677 ARXQ96QS3 562 aa17.04■□□□□ 0.32
MTHFD1-207ENST00000554677 CHD4Q14839 1912 aa17.04■□□□□ 0.32
MTHFD1-207ENST00000554677 KIF24Q5T7B8 1368 aa17.03■□□□□ 0.32
MTHFD1-207ENST00000554677 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
MTHFD1-207ENST00000554677 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
MTHFD1-207ENST00000554677 FLT4P35916 1363 aa17.02■□□□□ 0.32
MTHFD1-207ENST00000554677 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.32
MTHFD1-207ENST00000554677 RAPGEF4Q8WZA2 1011 aa17.02■□□□□ 0.32
MTHFD1-207ENST00000554677 ITGB4P16144 1822 aa17.02■□□□□ 0.31
MTHFD1-207ENST00000554677 CYP27B1O15528 508 aa17.01■□□□□ 0.31
MTHFD1-207ENST00000554677 TATP17735 454 aaPredicted RBP17.01■□□□□ 0.31
MTHFD1-207ENST00000554677 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
MTHFD1-207ENST00000554677 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
MTHFD1-207ENST00000554677 TAF1LQ8IZX4 1826 aa17■□□□□ 0.31
MTHFD1-207ENST00000554677 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
MTHFD1-207ENST00000554677 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
MTHFD1-207ENST00000554677 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
MTHFD1-207ENST00000554677 NCAPD2Q15021 1401 aa16.99■□□□□ 0.31
MTHFD1-207ENST00000554677 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
MTHFD1-207ENST00000554677 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
MTHFD1-207ENST00000554677 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
MTHFD1-207ENST00000554677 PKD1L3Q7Z443 1732 aa16.98■□□□□ 0.31
MTHFD1-207ENST00000554677 TOGARAM1Q9Y4F4 1720 aa16.98■□□□□ 0.31
MTHFD1-207ENST00000554677 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
MTHFD1-207ENST00000554677 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
MTHFD1-207ENST00000554677 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
MTHFD1-207ENST00000554677 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.31
MTHFD1-207ENST00000554677 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
MTHFD1-207ENST00000554677 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
MTHFD1-207ENST00000554677 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
MTHFD1-207ENST00000554677 EYA1Q99502 592 aa16.95■□□□□ 0.3
MTHFD1-207ENST00000554677 C5P01031 1676 aa16.94■□□□□ 0.3
MTHFD1-207ENST00000554677 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
MTHFD1-207ENST00000554677 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
MTHFD1-207ENST00000554677 PIGBQ92521 554 aa16.93■□□□□ 0.3
MTHFD1-207ENST00000554677 KCNA4P22459 653 aa16.92■□□□□ 0.3
MTHFD1-207ENST00000554677 POLD1P28340 1107 aa16.92■□□□□ 0.3
MTHFD1-207ENST00000554677 PALLDQ8WX93 1383 aa16.91■□□□□ 0.3
MTHFD1-207ENST00000554677 HSPA5P11021 654 aaKnown RBP16.91■□□□□ 0.3
MTHFD1-207ENST00000554677 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
MTHFD1-207ENST00000554677 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
MTHFD1-207ENST00000554677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.9■□□□□ 0.31e-8■□□□□ 10.5
MTHFD1-207ENST00000554677 UBR3Q6ZT12 1888 aa16.9■□□□□ 0.3
MTHFD1-207ENST00000554677 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
MTHFD1-207ENST00000554677 POLR3GLQ9BT43 218 aa16.89■□□□□ 0.29
MTHFD1-207ENST00000554677 SPG7Q9UQ90 795 aa16.89■□□□□ 0.29
MTHFD1-207ENST00000554677 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 MSH5O43196 834 aa16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 GPR162Q16538 588 aa16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 PANK3Q9H999 370 aa16.88■□□□□ 0.29
MTHFD1-207ENST00000554677 SMIM5Q71RC9 77 aa16.87■□□□□ 0.29
MTHFD1-207ENST00000554677 PHKG2P15735 406 aa16.86■□□□□ 0.29
MTHFD1-207ENST00000554677 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
MTHFD1-207ENST00000554677 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
MTHFD1-207ENST00000554677 FLAD1Q8NFF5 587 aa16.85■□□□□ 0.29
MTHFD1-207ENST00000554677 LOC102724428A0A0B4J2F2 783 aa16.84■□□□□ 0.29
MTHFD1-207ENST00000554677 YBX3P16989 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
MTHFD1-207ENST00000554677 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
MTHFD1-207ENST00000554677 SIK1P57059 783 aa16.84■□□□□ 0.29
MTHFD1-207ENST00000554677 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
MTHFD1-207ENST00000554677 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
MTHFD1-207ENST00000554677 ITPK1Q13572 414 aa16.83■□□□□ 0.28
MTHFD1-207ENST00000554677 ATG3Q9NT62 314 aa16.83■□□□□ 0.28
MTHFD1-207ENST00000554677 TMOD3Q9NYL9 352 aa16.83■□□□□ 0.28
MTHFD1-207ENST00000554677 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
MTHFD1-207ENST00000554677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
MTHFD1-207ENST00000554677 AK7Q96M32 723 aa16.81■□□□□ 0.28
MTHFD1-207ENST00000554677 PLEKHG2Q9H7P9 1386 aa16.8■□□□□ 0.28
MTHFD1-207ENST00000554677 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
MTHFD1-207ENST00000554677 CD2APQ9Y5K6 639 aa16.8■□□□□ 0.28
MTHFD1-207ENST00000554677 MYH14Q7Z406 1995 aaKnown RBP16.79■□□□□ 0.28
MTHFD1-207ENST00000554677 PHF14O94880 888 aa16.79■□□□□ 0.28
MTHFD1-207ENST00000554677 SSFA2P28290 1259 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms