RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CNNM1Q9NRU3 951 aa16.45■□□□□ 0.22
VTI1B-204ENST00000554659 KIAA0754O94854 1291 aa16.45■□□□□ 0.22
VTI1B-204ENST00000554659 CTNNA3Q9UI47 895 aa16.45■□□□□ 0.22
VTI1B-204ENST00000554659 MTMR7Q9Y216 660 aa16.45■□□□□ 0.22
VTI1B-204ENST00000554659 STIM1Q13586 685 aa16.45■□□□□ 0.22
VTI1B-204ENST00000554659 PLEKHH1Q9ULM0 1364 aa16.44■□□□□ 0.22
VTI1B-204ENST00000554659 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
VTI1B-204ENST00000554659 PCF11O94913 1555 aaKnown RBP16.44■□□□□ 0.22
VTI1B-204ENST00000554659 EIF3JO75822 258 aaKnown RBP16.44■□□□□ 0.22
VTI1B-204ENST00000554659 ESCO1Q5FWF5 840 aa16.44■□□□□ 0.22
VTI1B-204ENST00000554659 UPF3BQ9BZI7 483 aaKnown RBP16.44■□□□□ 0.22
VTI1B-204ENST00000554659 LUC7LQ9NQ29 371 aaKnown RBP16.44■□□□□ 0.22
VTI1B-204ENST00000554659 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
VTI1B-204ENST00000554659 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
VTI1B-204ENST00000554659 SMTNL1A8MU46 457 aa16.44■□□□□ 0.22
VTI1B-204ENST00000554659 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
VTI1B-204ENST00000554659 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
VTI1B-204ENST00000554659 NEFHP12036 1026 aa16.43■□□□□ 0.22
VTI1B-204ENST00000554659 MX1P20591 662 aa16.43■□□□□ 0.22
VTI1B-204ENST00000554659 PDCL2Q8N4E4 241 aa16.43■□□□□ 0.22
VTI1B-204ENST00000554659 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
VTI1B-204ENST00000554659 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
VTI1B-204ENST00000554659 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
VTI1B-204ENST00000554659 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
VTI1B-204ENST00000554659 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
VTI1B-204ENST00000554659 GOLGA6L10A6NI86 522 aa16.42■□□□□ 0.22
VTI1B-204ENST00000554659 CDK13Q14004 1512 aaKnown RBP16.42■□□□□ 0.22
VTI1B-204ENST00000554659 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
VTI1B-204ENST00000554659 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
VTI1B-204ENST00000554659 NOL7Q9UMY1 257 aaKnown RBP16.42■□□□□ 0.22
VTI1B-204ENST00000554659 KIF2AO00139 706 aaPredicted RBP16.42■□□□□ 0.22
VTI1B-204ENST00000554659 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
VTI1B-204ENST00000554659 CCDC183Q5T5S1 534 aa16.41■□□□□ 0.22
VTI1B-204ENST00000554659 FAM177A1Q8N128 213 aaPredicted RBP16.41■□□□□ 0.22
VTI1B-204ENST00000554659 RRS1Q15050 365 aaKnown RBP16.41■□□□□ 0.22
VTI1B-204ENST00000554659 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
VTI1B-204ENST00000554659 GLRX3O76003 335 aaKnown RBP16.4■□□□□ 0.22
VTI1B-204ENST00000554659 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
VTI1B-204ENST00000554659 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
VTI1B-204ENST00000554659 DHX37Q8IY37 1157 aaKnown RBP16.4■□□□□ 0.22
VTI1B-204ENST00000554659 ERLIN2O94905 339 aa16.4■□□□□ 0.22
VTI1B-204ENST00000554659 CABP4P57796 275 aa16.4■□□□□ 0.22
VTI1B-204ENST00000554659 DHX29Q7Z478 1369 aaKnown RBP16.4■□□□□ 0.22
VTI1B-204ENST00000554659 GOLGA6L7A0A1B0GV03 622 aa16.4■□□□□ 0.22
VTI1B-204ENST00000554659 CCDC57Q2TAC2 916 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 SH2B1Q9NRF2 756 aaPredicted RBP16.39■□□□□ 0.21
VTI1B-204ENST00000554659 PODXL2Q9NZ53 605 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
VTI1B-204ENST00000554659 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 CCDC181Q5TID7 509 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 WASF1Q92558 559 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 DEF6Q9H4E7 631 aa16.39■□□□□ 0.21
VTI1B-204ENST00000554659 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
VTI1B-204ENST00000554659 IQCEQ6IPM2 695 aa16.38■□□□□ 0.21
VTI1B-204ENST00000554659 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
VTI1B-204ENST00000554659 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
VTI1B-204ENST00000554659 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
VTI1B-204ENST00000554659 BTBD11A6QL63 1104 aa16.38■□□□□ 0.21
VTI1B-204ENST00000554659 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
VTI1B-204ENST00000554659 ABCC5O15440 1437 aa16.38■□□□□ 0.21
VTI1B-204ENST00000554659 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
VTI1B-204ENST00000554659 CENPHQ9H3R5 247 aa16.38■□□□□ 0.21
VTI1B-204ENST00000554659 ERICH4A6NGS2 130 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 IKQ13123 557 aaPredicted RBP16.37■□□□□ 0.21
VTI1B-204ENST00000554659 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
VTI1B-204ENST00000554659 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 MYL6BP14649 208 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 ZRSR2Q15696 482 aaKnown RBP16.37■□□□□ 0.21
VTI1B-204ENST00000554659 CCDC83Q8IWF9 413 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 SNAPC4Q5SXM2 1469 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 SYCP1Q15431 976 aa16.37■□□□□ 0.21
VTI1B-204ENST00000554659 RPRD2Q5VT52 1461 aaKnown RBP16.36■□□□□ 0.21
VTI1B-204ENST00000554659 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 FAM177BA6PVY3 158 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 SSFA2P28290 1259 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 UBXN4Q92575 508 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 FAM193AP78312 1265 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 TAX1BP1Q86VP1 789 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 KRI1Q8N9T8 703 aaKnown RBP16.36■□□□□ 0.21
VTI1B-204ENST00000554659 NUP133Q8WUM0 1156 aa16.36■□□□□ 0.21
VTI1B-204ENST00000554659 USP8P40818 1118 aa16.35■□□□□ 0.21
VTI1B-204ENST00000554659 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
VTI1B-204ENST00000554659 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
VTI1B-204ENST00000554659 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
VTI1B-204ENST00000554659 IMMTQ16891 758 aaKnown RBP16.35■□□□□ 0.21
VTI1B-204ENST00000554659 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
VTI1B-204ENST00000554659 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
VTI1B-204ENST00000554659 SEPT7Q16181 437 aaKnown RBP16.35■□□□□ 0.21
VTI1B-204ENST00000554659 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
VTI1B-204ENST00000554659 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
VTI1B-204ENST00000554659 PTPN14Q15678 1187 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 PRPF40BQ6NWY9 871 aaKnown RBP16.34■□□□□ 0.21
VTI1B-204ENST00000554659 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
VTI1B-204ENST00000554659 NESP48681 1621 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 CAMK4Q16566 473 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 UBAC1Q9BSL1 405 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms