RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NUCB1Q02818 461 aa4.51□□□□□ -1.69
SEC23A-207ENST00000554615 MRPL50Q8N5N7 158 aaKnown RBP4.51□□□□□ -1.69
SEC23A-207ENST00000554615 RFX7Q2KHR2 1363 aa4.51□□□□□ -1.69
SEC23A-207ENST00000554615 CLUAP1Q96AJ1 413 aa4.51□□□□□ -1.69
SEC23A-207ENST00000554615 ZNF777Q9ULD5 760 aaPredicted RBP4.5□□□□□ -1.69
SEC23A-207ENST00000554615 ISY1Q9ULR0 285 aaKnown RBP4.5□□□□□ -1.69
SEC23A-207ENST00000554615 KNSTRNQ9Y448 316 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 GREB1LQ9C091 1923 aaPredicted RBP4.5□□□□□ -1.69
SEC23A-207ENST00000554615 PSME4Q14997 1843 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 DDRGK1Q96HY6 314 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 POLKQ9UBT6 870 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 TBX22Q9Y458 520 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 KIF13BQ9NQT8 1826 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 LOC285556D6RIA3 1793 aa4.5□□□□□ -1.69
SEC23A-207ENST00000554615 TMPOP42166 694 aaKnown RBP4.5□□□□□ -1.69
SEC23A-207ENST00000554615 ZBTB7BO15156 539 aaPredicted RBP4.49□□□□□ -1.69
SEC23A-207ENST00000554615 RLBP1P12271 317 aa4.49□□□□□ -1.69
SEC23A-207ENST00000554615 PMFBP1Q8TBY8 1022 aa4.49□□□□□ -1.69
SEC23A-207ENST00000554615 ATP1B4Q9UN42 357 aaPredicted RBP4.49□□□□□ -1.69
SEC23A-207ENST00000554615 MYO5AQ9Y4I1 1855 aaKnown RBP4.49□□□□□ -1.69
SEC23A-207ENST00000554615 WASLO00401 505 aaPredicted RBP4.49□□□□□ -1.69
SEC23A-207ENST00000554615 B4GALNT3Q6L9W6 998 aa4.49□□□□□ -1.69
SEC23A-207ENST00000554615 CHL1O00533 1208 aa4.49□□□□□ -1.69
SEC23A-207ENST00000554615 PCDHB15Q9Y5E8 787 aa4.49□□□□□ -1.69
SEC23A-207ENST00000554615 CPDO75976 1380 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 DOT1LQ8TEK3 1739 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 FAM9BQ8IZU0 186 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 VAMP4O75379 141 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 BMP2KLQ5H9B9 411 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 PTPRCP08575 1304 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 DISP2A7MBM2 1401 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 SIRT2Q8IXJ6 389 aa4.48□□□□□ -1.69
SEC23A-207ENST00000554615 ALDH8A1Q9H2A2 487 aaPredicted RBP4.48□□□□□ -1.69
SEC23A-207ENST00000554615 CIZ1Q9ULV3 898 aaPredicted RBP4.48□□□□□ -1.69
SEC23A-207ENST00000554615 NFE2L2Q16236 605 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 PPP4R3CPQ6ZMV5 832 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.47□□□□□ -1.69
SEC23A-207ENST00000554615 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
SEC23A-207ENST00000554615 FLT4P35916 1363 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 MYH2Q9UKX2 1941 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 HOXB7P09629 217 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 TCP11L2Q8N4U5 519 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 STAP2Q9UGK3 403 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 MYH16Q9H6N6 1097 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 MYH13Q9UKX3 1938 aa4.47□□□□□ -1.69
SEC23A-207ENST00000554615 PPM1GO15355 546 aaPredicted RBP4.46□□□□□ -1.69
SEC23A-207ENST00000554615 CFAP44Q96MT7 982 aa4.46□□□□□ -1.69
SEC23A-207ENST00000554615 MTX1Q13505 466 aa4.46□□□□□ -1.7
SEC23A-207ENST00000554615 SLC12A5Q9H2X9 1139 aa4.46□□□□□ -1.7
SEC23A-207ENST00000554615 SLIT2O94813 1529 aa4.46□□□□□ -1.7
SEC23A-207ENST00000554615 BCL9LQ86UU0 1499 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 TRIM27P14373 513 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 GCC1Q96CN9 775 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 LTBP4Q8N2S1 1624 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 ATF7IPQ6VMQ6 1270 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 LRP10Q7Z4F1 713 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 TMEM87AQ8NBN3 555 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 ATRNO75882 1429 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 APAF1O14727 1248 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 BCAR3O75815 825 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 MTHFSP49914 203 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 POLA2Q14181 598 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 DCTPP1Q9H773 170 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 MYH1P12882 1939 aa4.45□□□□□ -1.7
SEC23A-207ENST00000554615 NID2Q14112 1375 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 RPAP1Q9BWH6 1393 aaPredicted RBP4.44□□□□□ -1.7
SEC23A-207ENST00000554615 TCHHQ07283 1943 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 CALD1Q05682 793 aaKnown RBP4.44□□□□□ -1.7
SEC23A-207ENST00000554615 CDK19Q9BWU1 502 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 TERF2IPQ9NYB0 399 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 MAP3K5Q99683 1374 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 EIF5BO60841 1220 aaKnown RBP4.44□□□□□ -1.7
SEC23A-207ENST00000554615 CCDC136Q96JN2 1154 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 DDX19BQ9UMR2 479 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 PCDH10Q9P2E7 1040 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 ARFGEF1Q9Y6D6 1849 aa4.44□□□□□ -1.7
SEC23A-207ENST00000554615 RAPGEF3O95398 923 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 RAB3GAP1Q15042 981 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 KDM6AO15550 1401 aaPredicted RBP4.43□□□□□ -1.7
SEC23A-207ENST00000554615 SEC24BO95487 1268 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 TERF1P54274 439 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 FBLN2P98095 1184 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 CUL4AQ13619 759 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 CC2D1BQ5T0F9 858 aaKnown RBP4.43□□□□□ -1.7
SEC23A-207ENST00000554615 FBXL16Q8N461 479 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 CACNA1SQ13698 1873 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 BCL9O00512 1426 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 KDM2AQ9Y2K7 1162 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 C10orf71Q711Q0 1435 aa4.43□□□□□ -1.7
SEC23A-207ENST00000554615 ZKSCAN2Q63HK3 967 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 SSH1Q8WYL5 1049 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 PPP1R9BQ96SB3 815 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 TNS3Q68CZ2 1445 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 PDLIM2Q96JY6 352 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 MORC2Q9Y6X9 1032 aaPredicted RBP4.42□□□□□ -1.7
SEC23A-207ENST00000554615 ARID3CA6NKF2 412 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 WDR43Q15061 677 aaKnown RBP eCLIP4.42□□□□□ -1.7
SEC23A-207ENST00000554615 PRAM1Q96QH2 718 aa4.42□□□□□ -1.7
SEC23A-207ENST00000554615 PAPPA2Q9BXP8 1791 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms