RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
PRKCH-206ENST00000553830 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
PRKCH-206ENST00000553830 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
PRKCH-206ENST00000553830 IL2RBP14784 551 aa18.56■□□□□ 0.56
PRKCH-206ENST00000553830 ZNF530Q6P9A1 599 aaPredicted RBP18.56■□□□□ 0.56
PRKCH-206ENST00000553830 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
PRKCH-206ENST00000553830 VPS72Q15906 364 aa18.55■□□□□ 0.56
PRKCH-206ENST00000553830 GAS2L2Q8NHY3 880 aa18.55■□□□□ 0.56
PRKCH-206ENST00000553830 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
PRKCH-206ENST00000553830 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
PRKCH-206ENST00000553830 A0A0G2JS52 829 aa18.53■□□□□ 0.56
PRKCH-206ENST00000553830 MYT1Q01538 1121 aa18.53■□□□□ 0.56
PRKCH-206ENST00000553830 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
PRKCH-206ENST00000553830 DCTN1Q14203 1278 aa18.52■□□□□ 0.56
PRKCH-206ENST00000553830 FAM98CQ17RN3 349 aaKnown RBP18.52■□□□□ 0.56
PRKCH-206ENST00000553830 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
PRKCH-206ENST00000553830 THUMPD2Q9BTF0 503 aaKnown RBP18.52■□□□□ 0.56
PRKCH-206ENST00000553830 SPG7Q9UQ90 795 aa18.52■□□□□ 0.56
PRKCH-206ENST00000553830 KAT6BQ8WYB5 2073 aa18.52■□□□□ 0.56
PRKCH-206ENST00000553830 GLI3P10071 1580 aa18.51■□□□□ 0.55
PRKCH-206ENST00000553830 ATRNO75882 1429 aa18.51■□□□□ 0.55
PRKCH-206ENST00000553830 C1orf141Q5JVX7 400 aa18.51■□□□□ 0.55
PRKCH-206ENST00000553830 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
PRKCH-206ENST00000553830 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
PRKCH-206ENST00000553830 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
PRKCH-206ENST00000553830 DISP2A7MBM2 1401 aa18.5■□□□□ 0.55
PRKCH-206ENST00000553830 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
PRKCH-206ENST00000553830 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
PRKCH-206ENST00000553830 MCM10Q7L590 875 aa18.5■□□□□ 0.55
PRKCH-206ENST00000553830 WWC1Q8IX03 1113 aa18.5■□□□□ 0.55
PRKCH-206ENST00000553830 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
PRKCH-206ENST00000553830 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
PRKCH-206ENST00000553830 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
PRKCH-206ENST00000553830 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
PRKCH-206ENST00000553830 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
PRKCH-206ENST00000553830 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
PRKCH-206ENST00000553830 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
PRKCH-206ENST00000553830 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
PRKCH-206ENST00000553830 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
PRKCH-206ENST00000553830 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 CDCA7LQ96GN5 454 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
PRKCH-206ENST00000553830 PCDH11XQ9BZA7 1347 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 PCDH11YQ9BZA8 1340 aa18.47■□□□□ 0.55
PRKCH-206ENST00000553830 CYP27B1O15528 508 aa18.46■□□□□ 0.55
PRKCH-206ENST00000553830 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
PRKCH-206ENST00000553830 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
PRKCH-206ENST00000553830 EXOC5O00471 708 aa18.45■□□□□ 0.54
PRKCH-206ENST00000553830 PHKG2P15735 406 aa18.45■□□□□ 0.54
PRKCH-206ENST00000553830 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
PRKCH-206ENST00000553830 DDB1Q16531 1140 aa18.45■□□□□ 0.54
PRKCH-206ENST00000553830 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
PRKCH-206ENST00000553830 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
PRKCH-206ENST00000553830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
PRKCH-206ENST00000553830 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
PRKCH-206ENST00000553830 THSD7AQ9UPZ6 1657 aa18.44■□□□□ 0.54
PRKCH-206ENST00000553830 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
PRKCH-206ENST00000553830 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
PRKCH-206ENST00000553830 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
PRKCH-206ENST00000553830 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
PRKCH-206ENST00000553830 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
PRKCH-206ENST00000553830 WDR63Q8IWG1 891 aa18.42■□□□□ 0.54
PRKCH-206ENST00000553830 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
PRKCH-206ENST00000553830 BRWD3Q6RI45 1802 aa18.42■□□□□ 0.54
PRKCH-206ENST00000553830 KDM6AO15550 1401 aaPredicted RBP18.41■□□□□ 0.54
PRKCH-206ENST00000553830 TOGARAM1Q9Y4F4 1720 aa18.41■□□□□ 0.54
PRKCH-206ENST00000553830 HTATSF1O43719 755 aaKnown RBP18.41■□□□□ 0.54
PRKCH-206ENST00000553830 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
PRKCH-206ENST00000553830 DOT1LQ8TEK3 1739 aa18.4■□□□□ 0.54
PRKCH-206ENST00000553830 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
PRKCH-206ENST00000553830 CALD1Q05682 793 aaKnown RBP18.4■□□□□ 0.54
PRKCH-206ENST00000553830 PDE3BQ13370 1112 aa18.4■□□□□ 0.54
PRKCH-206ENST00000553830 TSR2Q969E8 191 aaKnown RBP18.4■□□□□ 0.54
PRKCH-206ENST00000553830 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
PRKCH-206ENST00000553830 ITGB4P16144 1822 aa18.39■□□□□ 0.54
PRKCH-206ENST00000553830 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
PRKCH-206ENST00000553830 SLFN5Q08AF3 891 aa18.39■□□□□ 0.53
PRKCH-206ENST00000553830 TEFQ10587 303 aa18.39■□□□□ 0.53
PRKCH-206ENST00000553830 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
PRKCH-206ENST00000553830 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
PRKCH-206ENST00000553830 E9PSI1 815 aa18.38■□□□□ 0.53
PRKCH-206ENST00000553830 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
PRKCH-206ENST00000553830 RGS17Q9UGC6 210 aaPredicted RBP18.38■□□□□ 0.53
PRKCH-206ENST00000553830 RBM6P78332 1123 aaKnown RBP18.37■□□□□ 0.53
PRKCH-206ENST00000553830 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
PRKCH-206ENST00000553830 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
PRKCH-206ENST00000553830 CABP4P57796 275 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 GNAI1P63096 354 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 IL16Q14005 1332 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 POTEAQ6S8J7 498 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
PRKCH-206ENST00000553830 RXRBP28702 533 aa18.35■□□□□ 0.53
PRKCH-206ENST00000553830 FAM182BQ5T319 152 aa18.35■□□□□ 0.53
PRKCH-206ENST00000553830 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms