RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
APEX1-205ENST00000553555 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
APEX1-205ENST00000553555 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
APEX1-205ENST00000553555 LARP1Q6PKG0 1096 aaKnown RBP17.92■□□□□ 0.46
APEX1-205ENST00000553555 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
APEX1-205ENST00000553555 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
APEX1-205ENST00000553555 GNAT3A8MTJ3 354 aa17.91■□□□□ 0.46
APEX1-205ENST00000553555 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
APEX1-205ENST00000553555 GTF3C3Q9Y5Q9 886 aa17.91■□□□□ 0.46
APEX1-205ENST00000553555 NWD2Q9ULI1 1742 aa17.91■□□□□ 0.46
APEX1-205ENST00000553555 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
APEX1-205ENST00000553555 MCM10Q7L590 875 aa17.9■□□□□ 0.46
APEX1-205ENST00000553555 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
APEX1-205ENST00000553555 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
APEX1-205ENST00000553555 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
APEX1-205ENST00000553555 PARP4Q9UKK3 1724 aaKnown RBP17.9■□□□□ 0.46
APEX1-205ENST00000553555 MEGF6O75095 1541 aa17.9■□□□□ 0.46
APEX1-205ENST00000553555 CRB1P82279 1406 aa17.89■□□□□ 0.46
APEX1-205ENST00000553555 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.45
APEX1-205ENST00000553555 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
APEX1-205ENST00000553555 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.45
APEX1-205ENST00000553555 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
APEX1-205ENST00000553555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.458e-8■□□□□ 10.1
APEX1-205ENST00000553555 GNAI1P63096 354 aa17.88■□□□□ 0.45
APEX1-205ENST00000553555 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
APEX1-205ENST00000553555 RCAN3Q9UKA8 241 aa17.88■□□□□ 0.45
APEX1-205ENST00000553555 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
APEX1-205ENST00000553555 CFAP44Q96MT7 982 aa17.87■□□□□ 0.45
APEX1-205ENST00000553555 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
APEX1-205ENST00000553555 SLIT2O94813 1529 aa17.87■□□□□ 0.45
APEX1-205ENST00000553555 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
APEX1-205ENST00000553555 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
APEX1-205ENST00000553555 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
APEX1-205ENST00000553555 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
APEX1-205ENST00000553555 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
APEX1-205ENST00000553555 OVOS2A0A0G2JMS6 1433 aa17.85■□□□□ 0.45
APEX1-205ENST00000553555 IL2RBP14784 551 aa17.84■□□□□ 0.45
APEX1-205ENST00000553555 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
APEX1-205ENST00000553555 LRP6O75581 1613 aa17.84■□□□□ 0.45
APEX1-205ENST00000553555 CHL1O00533 1208 aa17.83■□□□□ 0.45
APEX1-205ENST00000553555 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.45
APEX1-205ENST00000553555 MBIPQ9NS73 344 aa17.83■□□□□ 0.45
APEX1-205ENST00000553555 ADAMTS7Q9UKP4 1686 aa17.83■□□□□ 0.45
APEX1-205ENST00000553555 CEMIPQ8WUJ3 1361 aa17.83■□□□□ 0.45
APEX1-205ENST00000553555 SCN11AQ9UI33 1791 aa17.83■□□□□ 0.45
APEX1-205ENST00000553555 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
APEX1-205ENST00000553555 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
APEX1-205ENST00000553555 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
APEX1-205ENST00000553555 WNK3Q9BYP7 1800 aa17.83■□□□□ 0.44
APEX1-205ENST00000553555 PHKG2P15735 406 aa17.82■□□□□ 0.44
APEX1-205ENST00000553555 MPRIPQ6WCQ1 1025 aa17.82■□□□□ 0.44
APEX1-205ENST00000553555 IFNL2Q8IZJ0 200 aa17.82■□□□□ 0.44
APEX1-205ENST00000553555 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
APEX1-205ENST00000553555 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
APEX1-205ENST00000553555 SHANK3Q9BYB0 1731 aa17.82■□□□□ 0.44
APEX1-205ENST00000553555 RNMTO43148 476 aaKnown RBP17.81■□□□□ 0.44
APEX1-205ENST00000553555 CYP27B1O15528 508 aa17.8■□□□□ 0.44
APEX1-205ENST00000553555 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
APEX1-205ENST00000553555 TAF7Q15545 349 aaPredicted RBP17.8■□□□□ 0.44
APEX1-205ENST00000553555 UNC5CLQ8IV45 518 aa17.8■□□□□ 0.44
APEX1-205ENST00000553555 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
APEX1-205ENST00000553555 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
APEX1-205ENST00000553555 SPATA31A1Q5TZJ5 1347 aa17.8■□□□□ 0.44
APEX1-205ENST00000553555 BABAM1Q9NWV8 329 aa17.8■□□□□ 0.44
APEX1-205ENST00000553555 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
APEX1-205ENST00000553555 BCL9LQ86UU0 1499 aa17.79■□□□□ 0.44
APEX1-205ENST00000553555 SPATA31A5Q5VU36 1347 aa17.79■□□□□ 0.44
APEX1-205ENST00000553555 SPATA31A7Q8IWB4 1347 aa17.79■□□□□ 0.44
APEX1-205ENST00000553555 THRAP3Q9Y2W1 955 aaKnown RBP17.79■□□□□ 0.44
APEX1-205ENST00000553555 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.79■□□□□ 0.44
APEX1-205ENST00000553555 NEFLP07196 543 aa17.78■□□□□ 0.44
APEX1-205ENST00000553555 MIS18AQ9NYP9 233 aa17.78■□□□□ 0.44
APEX1-205ENST00000553555 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
APEX1-205ENST00000553555 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
APEX1-205ENST00000553555 HSP90AB1P08238 724 aaKnown RBP17.77■□□□□ 0.44
APEX1-205ENST00000553555 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
APEX1-205ENST00000553555 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
APEX1-205ENST00000553555 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
APEX1-205ENST00000553555 TEFQ10587 303 aa17.76■□□□□ 0.43
APEX1-205ENST00000553555 MEX3CQ5U5Q3 659 aaKnown RBP17.76■□□□□ 0.43
APEX1-205ENST00000553555 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
APEX1-205ENST00000553555 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
APEX1-205ENST00000553555 VPS72Q15906 364 aa17.76■□□□□ 0.43
APEX1-205ENST00000553555 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
APEX1-205ENST00000553555 CDCA7Q9BWT1 371 aaPredicted RBP17.76■□□□□ 0.43
APEX1-205ENST00000553555 VAMP4O75379 141 aa17.75■□□□□ 0.43
APEX1-205ENST00000553555 BCAR3O75815 825 aa17.75■□□□□ 0.43
APEX1-205ENST00000553555 FKBP8Q14318 412 aa17.75■□□□□ 0.43
APEX1-205ENST00000553555 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
APEX1-205ENST00000553555 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
APEX1-205ENST00000553555 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
APEX1-205ENST00000553555 USP21Q9UK80 565 aa17.74■□□□□ 0.43
APEX1-205ENST00000553555 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
APEX1-205ENST00000553555 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
APEX1-205ENST00000553555 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
APEX1-205ENST00000553555 DDX54Q8TDD1 881 aaKnown RBP17.73■□□□□ 0.43
APEX1-205ENST00000553555 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
APEX1-205ENST00000553555 EXOC5O00471 708 aa17.72■□□□□ 0.43
APEX1-205ENST00000553555 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
APEX1-205ENST00000553555 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms