RNA–Protein interactions for RNA: ENST00000553548.5

SRSF5-204, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-204ENST00000553548 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
SRSF5-204ENST00000553548 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
SRSF5-204ENST00000553548 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
SRSF5-204ENST00000553548 EXOC5O00471 708 aa13.18□□□□□ -0.3
SRSF5-204ENST00000553548 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRSF5-204ENST00000553548 DDB1Q16531 1140 aa13.18□□□□□ -0.3
SRSF5-204ENST00000553548 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
SRSF5-204ENST00000553548 RGS12O14924 1447 aa13.18□□□□□ -0.3
SRSF5-204ENST00000553548 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
SRSF5-204ENST00000553548 A0A0G2JS52 829 aa13.17□□□□□ -0.3
SRSF5-204ENST00000553548 MYT1Q01538 1121 aa13.17□□□□□ -0.3
SRSF5-204ENST00000553548 BRWD3Q6RI45 1802 aa13.17□□□□□ -0.3
SRSF5-204ENST00000553548 LRRC37A3O60309 1634 aa13.17□□□□□ -0.3
SRSF5-204ENST00000553548 CYP27B1O15528 508 aa13.16□□□□□ -0.3
SRSF5-204ENST00000553548 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
SRSF5-204ENST00000553548 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
SRSF5-204ENST00000553548 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
SRSF5-204ENST00000553548 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
SRSF5-204ENST00000553548 MARCH10Q8NA82 808 aaPredicted RBP13.16□□□□□ -0.3
SRSF5-204ENST00000553548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.32e-27■■□□□ 12.2
SRSF5-204ENST00000553548 SHANK3Q9BYB0 1731 aa13.16□□□□□ -0.3
SRSF5-204ENST00000553548 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
SRSF5-204ENST00000553548 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
SRSF5-204ENST00000553548 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
SRSF5-204ENST00000553548 TNS2Q63HR2 1409 aa13.14□□□□□ -0.31
SRSF5-204ENST00000553548 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
SRSF5-204ENST00000553548 AMOTQ4VCS5 1084 aa13.14□□□□□ -0.31
SRSF5-204ENST00000553548 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
SRSF5-204ENST00000553548 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
SRSF5-204ENST00000553548 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
SRSF5-204ENST00000553548 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
SRSF5-204ENST00000553548 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
SRSF5-204ENST00000553548 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
SRSF5-204ENST00000553548 PHKG2P15735 406 aa13.12□□□□□ -0.31
SRSF5-204ENST00000553548 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
SRSF5-204ENST00000553548 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
SRSF5-204ENST00000553548 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
SRSF5-204ENST00000553548 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
SRSF5-204ENST00000553548 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
SRSF5-204ENST00000553548 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
SRSF5-204ENST00000553548 APAF1O14727 1248 aa13.1□□□□□ -0.31
SRSF5-204ENST00000553548 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
SRSF5-204ENST00000553548 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
SRSF5-204ENST00000553548 RRP7AQ9Y3A4 280 aaKnown RBP13.1□□□□□ -0.31
SRSF5-204ENST00000553548 NFE2L2Q16236 605 aa13.09□□□□□ -0.31
SRSF5-204ENST00000553548 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
SRSF5-204ENST00000553548 MPRIPQ6WCQ1 1025 aa13.09□□□□□ -0.31
SRSF5-204ENST00000553548 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
SRSF5-204ENST00000553548 EP400Q96L91 3159 aa13.09□□□□□ -0.31
SRSF5-204ENST00000553548 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
SRSF5-204ENST00000553548 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
SRSF5-204ENST00000553548 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
SRSF5-204ENST00000553548 PTF1AQ7RTS3 328 aa13.08□□□□□ -0.32
SRSF5-204ENST00000553548 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
SRSF5-204ENST00000553548 DLG5Q8TDM6 1919 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
SRSF5-204ENST00000553548 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 KCNQ2O43526 872 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 NEFMP07197 916 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 RIPK4P57078 832 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
SRSF5-204ENST00000553548 BCL9O00512 1426 aa13.06□□□□□ -0.32
SRSF5-204ENST00000553548 RNMTO43148 476 aaKnown RBP13.06□□□□□ -0.32
SRSF5-204ENST00000553548 MCM10Q7L590 875 aa13.06□□□□□ -0.32
SRSF5-204ENST00000553548 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
SRSF5-204ENST00000553548 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
SRSF5-204ENST00000553548 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
SRSF5-204ENST00000553548 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
SRSF5-204ENST00000553548 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
SRSF5-204ENST00000553548 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
SRSF5-204ENST00000553548 HSP90AB1P08238 724 aaKnown RBP13.04□□□□□ -0.32
SRSF5-204ENST00000553548 ADAMTS7Q9UKP4 1686 aa13.04□□□□□ -0.32
SRSF5-204ENST00000553548 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
SRSF5-204ENST00000553548 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
SRSF5-204ENST00000553548 ERVV-2B6SEH9 535 aa13.03□□□□□ -0.32
SRSF5-204ENST00000553548 TRIM37O94972 964 aa13.03□□□□□ -0.32
SRSF5-204ENST00000553548 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
SRSF5-204ENST00000553548 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
SRSF5-204ENST00000553548 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
SRSF5-204ENST00000553548 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
SRSF5-204ENST00000553548 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.32
SRSF5-204ENST00000553548 PIGBQ92521 554 aa13.02□□□□□ -0.33
SRSF5-204ENST00000553548 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
SRSF5-204ENST00000553548 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
SRSF5-204ENST00000553548 ITGB4P16144 1822 aa13.02□□□□□ -0.33
SRSF5-204ENST00000553548 CABP4P57796 275 aa13.01□□□□□ -0.33
SRSF5-204ENST00000553548 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
SRSF5-204ENST00000553548 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
SRSF5-204ENST00000553548 CCDC27Q2M243 656 aa13□□□□□ -0.33
SRSF5-204ENST00000553548 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
SRSF5-204ENST00000553548 WWC1Q8IX03 1113 aa13□□□□□ -0.33
SRSF5-204ENST00000553548 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
SRSF5-204ENST00000553548 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
SRSF5-204ENST00000553548 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
SRSF5-204ENST00000553548 MRC1P22897 1456 aa12.98□□□□□ -0.33
SRSF5-204ENST00000553548 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms