RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
ACTN1-208ENST00000553370 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
ACTN1-208ENST00000553370 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
ACTN1-208ENST00000553370 COG3Q96JB2 828 aa13.92□□□□□ -0.18
ACTN1-208ENST00000553370 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
ACTN1-208ENST00000553370 AMPHP49418 695 aa13.9□□□□□ -0.18
ACTN1-208ENST00000553370 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
ACTN1-208ENST00000553370 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-208ENST00000553370 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
ACTN1-208ENST00000553370 QSER1Q2KHR3 1735 aa13.89□□□□□ -0.19
ACTN1-208ENST00000553370 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
ACTN1-208ENST00000553370 DDX54Q8TDD1 881 aaKnown RBP13.88□□□□□ -0.19
ACTN1-208ENST00000553370 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-208ENST00000553370 PAPPAQ13219 1627 aa13.87□□□□□ -0.19
ACTN1-208ENST00000553370 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
ACTN1-208ENST00000553370 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-208ENST00000553370 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
ACTN1-208ENST00000553370 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
ACTN1-208ENST00000553370 IP6K1Q92551 441 aa13.86□□□□□ -0.19
ACTN1-208ENST00000553370 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
ACTN1-208ENST00000553370 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
ACTN1-208ENST00000553370 LY75O60449 1722 aa13.85□□□□□ -0.19
ACTN1-208ENST00000553370 TMF1P82094 1093 aa13.85□□□□□ -0.19
ACTN1-208ENST00000553370 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
ACTN1-208ENST00000553370 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-208ENST00000553370 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
ACTN1-208ENST00000553370 RTL1A6NKG5 1358 aa13.83□□□□□ -0.19
ACTN1-208ENST00000553370 USP47Q96K76 1375 aa13.83□□□□□ -0.19
ACTN1-208ENST00000553370 HOXC9P31274 260 aa13.83□□□□□ -0.2
ACTN1-208ENST00000553370 DSG3P32926 999 aa13.83□□□□□ -0.2
ACTN1-208ENST00000553370 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-208ENST00000553370 CDCA8Q53HL2 280 aa13.82□□□□□ -0.2
ACTN1-208ENST00000553370 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
ACTN1-208ENST00000553370 ITGB4P16144 1822 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 ABCB7O75027 752 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 POLD1P28340 1107 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 PTGER2P43116 358 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 ZCRB1Q8TBF4 217 aaKnown RBP13.81□□□□□ -0.2
ACTN1-208ENST00000553370 RAPGEF4Q8WZA2 1011 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 ARXQ96QS3 562 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 TESK2Q96S53 571 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 TFCP2L1Q9NZI6 479 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 C5P01031 1676 aa13.81□□□□□ -0.2
ACTN1-208ENST00000553370 MEGF6O75095 1541 aa13.8□□□□□ -0.2
ACTN1-208ENST00000553370 RRS1Q15050 365 aaKnown RBP13.8□□□□□ -0.2
ACTN1-208ENST00000553370 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
ACTN1-208ENST00000553370 GGNBP2Q9H3C7 697 aa13.8□□□□□ -0.2
ACTN1-208ENST00000553370 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
ACTN1-208ENST00000553370 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
ACTN1-208ENST00000553370 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
ACTN1-208ENST00000553370 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
ACTN1-208ENST00000553370 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
ACTN1-208ENST00000553370 TATP17735 454 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-208ENST00000553370 FBLN1P23142 703 aa13.78□□□□□ -0.2
ACTN1-208ENST00000553370 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-208ENST00000553370 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
ACTN1-208ENST00000553370 GPR162Q16538 588 aa13.77□□□□□ -0.21
ACTN1-208ENST00000553370 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
ACTN1-208ENST00000553370 CCNL1Q9UK58 526 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-208ENST00000553370 FLT4P35916 1363 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 KCNQ4P56696 695 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 UTRNP46939 3433 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
ACTN1-208ENST00000553370 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-208ENST00000553370 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
ACTN1-208ENST00000553370 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
ACTN1-208ENST00000553370 PKD1L3Q7Z443 1732 aa13.75□□□□□ -0.21
ACTN1-208ENST00000553370 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
ACTN1-208ENST00000553370 FYB1O15117 783 aa13.74□□□□□ -0.21
ACTN1-208ENST00000553370 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
ACTN1-208ENST00000553370 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
ACTN1-208ENST00000553370 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
ACTN1-208ENST00000553370 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
ACTN1-208ENST00000553370 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
ACTN1-208ENST00000553370 GOLGB1Q14789 3259 aaKnown RBP13.73□□□□□ -0.21
ACTN1-208ENST00000553370 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
ACTN1-208ENST00000553370 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
ACTN1-208ENST00000553370 INSRP06213 1382 aa13.72□□□□□ -0.21
ACTN1-208ENST00000553370 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
ACTN1-208ENST00000553370 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
ACTN1-208ENST00000553370 NSD2O96028 1365 aa13.71□□□□□ -0.21
ACTN1-208ENST00000553370 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
ACTN1-208ENST00000553370 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
ACTN1-208ENST00000553370 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
ACTN1-208ENST00000553370 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
ACTN1-208ENST00000553370 ZNF784Q8NCA9 323 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-208ENST00000553370 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
ACTN1-208ENST00000553370 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
ACTN1-208ENST00000553370 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
ACTN1-208ENST00000553370 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
ACTN1-208ENST00000553370 AK7Q96M32 723 aa13.68□□□□□ -0.22
ACTN1-208ENST00000553370 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
ACTN1-208ENST00000553370 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-208ENST00000553370 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
ACTN1-208ENST00000553370 PHF14O94880 888 aa13.65□□□□□ -0.22
ACTN1-208ENST00000553370 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms