RNA–Protein interactions for RNA: ENST00000553165.1

AC027288.3-203, humanhuman

TSL 3 BASIC

Gene AC027288.3, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-203ENST00000553165 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
AC027288.3-203ENST00000553165 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
AC027288.3-203ENST00000553165 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 EP400Q96L91 3159 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 APAF1O14727 1248 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 HMOX1P09601 288 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 UNC5CLQ8IV45 518 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
AC027288.3-203ENST00000553165 COL5A2P05997 1499 aaPredicted RBP11.85□□□□□ -0.51
AC027288.3-203ENST00000553165 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
AC027288.3-203ENST00000553165 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
AC027288.3-203ENST00000553165 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
AC027288.3-203ENST00000553165 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
AC027288.3-203ENST00000553165 TMPOP42166 694 aaKnown RBP11.84□□□□□ -0.51
AC027288.3-203ENST00000553165 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
AC027288.3-203ENST00000553165 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
AC027288.3-203ENST00000553165 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
AC027288.3-203ENST00000553165 CRB1P82279 1406 aa11.84□□□□□ -0.51
AC027288.3-203ENST00000553165 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 TATP17735 454 aaPredicted RBP11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 NFE2L2Q16236 605 aa11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 CCDC146Q8IYE0 955 aa11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 NWD2Q9ULI1 1742 aa11.83□□□□□ -0.52
AC027288.3-203ENST00000553165 RIPK4P57078 832 aa11.82□□□□□ -0.52
AC027288.3-203ENST00000553165 CALD1Q05682 793 aaKnown RBP11.82□□□□□ -0.52
AC027288.3-203ENST00000553165 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
AC027288.3-203ENST00000553165 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
AC027288.3-203ENST00000553165 NRAPQ86VF7 1730 aa11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 IL2RBP14784 551 aa11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 VPS72Q15906 364 aa11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
AC027288.3-203ENST00000553165 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
AC027288.3-203ENST00000553165 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
AC027288.3-203ENST00000553165 SEPT12Q8IYM1 358 aa11.8□□□□□ -0.52
AC027288.3-203ENST00000553165 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
AC027288.3-203ENST00000553165 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 AKAP4Q5JQC9 854 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 IL16Q14005 1332 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 SPATA31A5Q5VU36 1347 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 SPATA31A7Q8IWB4 1347 aa11.79□□□□□ -0.52
AC027288.3-203ENST00000553165 A0A0G2JS52 829 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 MYT1Q01538 1121 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 DEFB132Q7Z7B7 95 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
AC027288.3-203ENST00000553165 E9PSI1 815 aa11.77□□□□□ -0.53
AC027288.3-203ENST00000553165 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
AC027288.3-203ENST00000553165 C1orf141Q5JVX7 400 aa11.77□□□□□ -0.53
AC027288.3-203ENST00000553165 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
AC027288.3-203ENST00000553165 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
AC027288.3-203ENST00000553165 EXOC5O00471 708 aa11.76□□□□□ -0.53
AC027288.3-203ENST00000553165 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
AC027288.3-203ENST00000553165 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 RRP7AQ9Y3A4 280 aaKnown RBP11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
AC027288.3-203ENST00000553165 SRCAPQ6ZRS2 3230 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 GNAI1P63096 354 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 ZNF530Q6P9A1 599 aaPredicted RBP11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
AC027288.3-203ENST00000553165 PHKG2P15735 406 aa11.73□□□□□ -0.53
AC027288.3-203ENST00000553165 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
AC027288.3-203ENST00000553165 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
AC027288.3-203ENST00000553165 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
AC027288.3-203ENST00000553165 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
AC027288.3-203ENST00000553165 MEGF6O75095 1541 aa11.72□□□□□ -0.53
AC027288.3-203ENST00000553165 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
AC027288.3-203ENST00000553165 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
AC027288.3-203ENST00000553165 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
AC027288.3-203ENST00000553165 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
AC027288.3-203ENST00000553165 DDB1Q16531 1140 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 390.1 ms