RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 VIRMAQ69YN4 1812 aaKnown RBP12.86□□□□□ -0.35
CNOT2-243ENST00000553078 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 CHL1O00533 1208 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 ATF3P18847 181 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 MCM10Q7L590 875 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
CNOT2-243ENST00000553078 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-243ENST00000553078 MSH5O43196 834 aa12.85□□□□□ -0.35
CNOT2-243ENST00000553078 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-243ENST00000553078 IP6K1Q92551 441 aa12.85□□□□□ -0.35
CNOT2-243ENST00000553078 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
CNOT2-243ENST00000553078 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-243ENST00000553078 NFAT5O94916 1531 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
CNOT2-243ENST00000553078 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 ZBTB40Q9NUA8 1239 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 CRB1P82279 1406 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
CNOT2-243ENST00000553078 LTN1O94822 1766 aa12.84□□□□□ -0.35
CNOT2-243ENST00000553078 SLIT3O75094 1523 aa12.83□□□□□ -0.35
CNOT2-243ENST00000553078 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
CNOT2-243ENST00000553078 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
CNOT2-243ENST00000553078 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
CNOT2-243ENST00000553078 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
CNOT2-243ENST00000553078 BECN1Q14457 450 aa12.82□□□□□ -0.36
CNOT2-243ENST00000553078 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
CNOT2-243ENST00000553078 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
CNOT2-243ENST00000553078 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
CNOT2-243ENST00000553078 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
CNOT2-243ENST00000553078 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
CNOT2-243ENST00000553078 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
CNOT2-243ENST00000553078 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
CNOT2-243ENST00000553078 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
CNOT2-243ENST00000553078 MSH6P52701 1360 aa12.81□□□□□ -0.36
CNOT2-243ENST00000553078 HMMRO75330 724 aa12.8□□□□□ -0.36
CNOT2-243ENST00000553078 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
CNOT2-243ENST00000553078 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
CNOT2-243ENST00000553078 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
CNOT2-243ENST00000553078 FOXO3O43524 673 aa12.79□□□□□ -0.36
CNOT2-243ENST00000553078 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
CNOT2-243ENST00000553078 USP19O94966 1318 aa12.79□□□□□ -0.36
CNOT2-243ENST00000553078 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
CNOT2-243ENST00000553078 ZBTB7BO15156 539 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-243ENST00000553078 GCP02774 474 aa12.78□□□□□ -0.36
CNOT2-243ENST00000553078 TEFQ10587 303 aa12.78□□□□□ -0.36
CNOT2-243ENST00000553078 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-243ENST00000553078 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
CNOT2-243ENST00000553078 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
CNOT2-243ENST00000553078 MST1RQ04912 1400 aa12.78□□□□□ -0.36
CNOT2-243ENST00000553078 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
CNOT2-243ENST00000553078 NUCB1Q02818 461 aa12.77□□□□□ -0.37
CNOT2-243ENST00000553078 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CNOT2-243ENST00000553078 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
CNOT2-243ENST00000553078 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
CNOT2-243ENST00000553078 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
CNOT2-243ENST00000553078 TMEM94Q12767 1356 aa12.77□□□□□ -0.37
CNOT2-243ENST00000553078 ABCC6O95255 1503 aa12.77□□□□□ -0.37
CNOT2-243ENST00000553078 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
CNOT2-243ENST00000553078 HOXB7P09629 217 aa12.76□□□□□ -0.37
CNOT2-243ENST00000553078 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
CNOT2-243ENST00000553078 PXDNLA1KZ92 1463 aa12.76□□□□□ -0.37
CNOT2-243ENST00000553078 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
CNOT2-243ENST00000553078 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
CNOT2-243ENST00000553078 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CNOT2-243ENST00000553078 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
CNOT2-243ENST00000553078 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
CNOT2-243ENST00000553078 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
CNOT2-243ENST00000553078 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
CNOT2-243ENST00000553078 GNAI3P08754 354 aa12.74□□□□□ -0.37
CNOT2-243ENST00000553078 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-243ENST00000553078 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-243ENST00000553078 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
CNOT2-243ENST00000553078 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 C1orf115Q9H7X2 142 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
CNOT2-243ENST00000553078 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 FLIIQ13045 1269 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
CNOT2-243ENST00000553078 MED1Q15648 1581 aaPredicted RBP12.72□□□□□ -0.37
CNOT2-243ENST00000553078 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
CNOT2-243ENST00000553078 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
CNOT2-243ENST00000553078 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
CNOT2-243ENST00000553078 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
CNOT2-243ENST00000553078 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
CNOT2-243ENST00000553078 MIS18AQ9NYP9 233 aa12.71□□□□□ -0.37
CNOT2-243ENST00000553078 RGS12O14924 1447 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms