RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 FHDC1Q9C0D6 1143 aaPredicted RBP17.29■□□□□ 0.36
CDK4-214ENST00000552862 RGPD5Q99666 1765 aa17.29■□□□□ 0.36
CDK4-214ENST00000552862 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
CDK4-214ENST00000552862 INSRP06213 1382 aa17.28■□□□□ 0.36
CDK4-214ENST00000552862 FLT4P35916 1363 aa17.28■□□□□ 0.36
CDK4-214ENST00000552862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDK4-214ENST00000552862 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
CDK4-214ENST00000552862 LTN1O94822 1766 aa17.27■□□□□ 0.35
CDK4-214ENST00000552862 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
CDK4-214ENST00000552862 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
CDK4-214ENST00000552862 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
CDK4-214ENST00000552862 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
CDK4-214ENST00000552862 GPR162Q16538 588 aa17.25■□□□□ 0.35
CDK4-214ENST00000552862 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
CDK4-214ENST00000552862 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
CDK4-214ENST00000552862 SGIP1Q9BQI5 828 aa17.24■□□□□ 0.35
CDK4-214ENST00000552862 NSD2O96028 1365 aa17.24■□□□□ 0.35
CDK4-214ENST00000552862 NSD3Q9BZ95 1437 aa17.23■□□□□ 0.35
CDK4-214ENST00000552862 NBPF6Q5VWK0 638 aa17.23■□□□□ 0.35
CDK4-214ENST00000552862 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
CDK4-214ENST00000552862 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
CDK4-214ENST00000552862 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
CDK4-214ENST00000552862 LRRC4BQ9NT99 713 aa17.22■□□□□ 0.35
CDK4-214ENST00000552862 MSH5O43196 834 aa17.21■□□□□ 0.35
CDK4-214ENST00000552862 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
CDK4-214ENST00000552862 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
CDK4-214ENST00000552862 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
CDK4-214ENST00000552862 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
CDK4-214ENST00000552862 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
CDK4-214ENST00000552862 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
CDK4-214ENST00000552862 BTAF1O14981 1849 aa17.17■□□□□ 0.34
CDK4-214ENST00000552862 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
CDK4-214ENST00000552862 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDK4-214ENST00000552862 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
CDK4-214ENST00000552862 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
CDK4-214ENST00000552862 IFNL2Q8IZJ0 200 aa17.17■□□□□ 0.34
CDK4-214ENST00000552862 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
CDK4-214ENST00000552862 AK7Q96M32 723 aa17.16■□□□□ 0.34
CDK4-214ENST00000552862 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
CDK4-214ENST00000552862 ZNF784Q8NCA9 323 aaPredicted RBP17.14■□□□□ 0.33
CDK4-214ENST00000552862 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
CDK4-214ENST00000552862 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
CDK4-214ENST00000552862 FBLN1P23142 703 aa17.12■□□□□ 0.33
CDK4-214ENST00000552862 SSFA2P28290 1259 aa17.12■□□□□ 0.33
CDK4-214ENST00000552862 QSER1Q2KHR3 1735 aa17.12■□□□□ 0.33
CDK4-214ENST00000552862 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
CDK4-214ENST00000552862 MEGF6O75095 1541 aa17.11■□□□□ 0.33
CDK4-214ENST00000552862 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
CDK4-214ENST00000552862 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
CDK4-214ENST00000552862 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
CDK4-214ENST00000552862 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
CDK4-214ENST00000552862 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
CDK4-214ENST00000552862 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
CDK4-214ENST00000552862 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
CDK4-214ENST00000552862 MYOM1P52179 1685 aa17.1■□□□□ 0.33
CDK4-214ENST00000552862 CYP27B1O15528 508 aa17.09■□□□□ 0.33
CDK4-214ENST00000552862 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
CDK4-214ENST00000552862 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
CDK4-214ENST00000552862 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.32
CDK4-214ENST00000552862 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 ADRA2BP18089 450 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 SIK1P57059 783 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 EYA1Q99502 592 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
CDK4-214ENST00000552862 CHD4Q14839 1912 aa17.06■□□□□ 0.32
CDK4-214ENST00000552862 GIGYF1O75420 1035 aaPredicted RBP17.06■□□□□ 0.32
CDK4-214ENST00000552862 PIGBQ92521 554 aa17.06■□□□□ 0.32
CDK4-214ENST00000552862 LY75O60449 1722 aa17.06■□□□□ 0.32
CDK4-214ENST00000552862 PHKG2P15735 406 aa17.05■□□□□ 0.32
CDK4-214ENST00000552862 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
CDK4-214ENST00000552862 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
CDK4-214ENST00000552862 KCNQ4P56696 695 aa17.04■□□□□ 0.32
CDK4-214ENST00000552862 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
CDK4-214ENST00000552862 TRAPPC3LQ5T215 181 aa17.04■□□□□ 0.32
CDK4-214ENST00000552862 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
CDK4-214ENST00000552862 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
CDK4-214ENST00000552862 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
CDK4-214ENST00000552862 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
CDK4-214ENST00000552862 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
CDK4-214ENST00000552862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
CDK4-214ENST00000552862 DOT1LQ8TEK3 1739 aa17.02■□□□□ 0.32
CDK4-214ENST00000552862 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
CDK4-214ENST00000552862 PANK3Q9H999 370 aa17.02■□□□□ 0.32
CDK4-214ENST00000552862 CABP4P57796 275 aa17.01■□□□□ 0.31
CDK4-214ENST00000552862 TGFB2P61812 414 aa17.01■□□□□ 0.31
CDK4-214ENST00000552862 MTHFSP49914 203 aa17■□□□□ 0.31
CDK4-214ENST00000552862 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
CDK4-214ENST00000552862 GNPATO15228 680 aa16.99■□□□□ 0.31
CDK4-214ENST00000552862 RFC4P35249 363 aa16.99■□□□□ 0.31
CDK4-214ENST00000552862 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
CDK4-214ENST00000552862 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
CDK4-214ENST00000552862 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
CDK4-214ENST00000552862 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
CDK4-214ENST00000552862 MSL1Q68DK7 614 aa16.97■□□□□ 0.31
CDK4-214ENST00000552862 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
CDK4-214ENST00000552862 GPBP1L1Q9HC44 474 aaPredicted RBP16.97■□□□□ 0.31
CDK4-214ENST00000552862 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms