RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 CEP170Q5SW79 1584 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 PER1O15534 1290 aaPredicted RBP8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 FMNL1O95466 1100 aaPredicted RBP8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 NR6A1Q15406 480 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 KDM5DQ9BY66 1539 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 ARHGEF12Q9NZN5 1544 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 DHX29Q7Z478 1369 aaKnown RBP8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 USP47Q96K76 1375 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
CHMP4A-210ENST00000552620 ABCA8O94911 1581 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 CROCC2H7BZ55 1655 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 SMG6Q86US8 1419 aaKnown RBP8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 GPR37L1O60883 481 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 BCAMP50895 628 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 PTPN5P54829 565 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 LYPD8Q6UX82 237 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 RNF19BQ6ZMZ0 732 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 NUP155O75694 1391 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 ATP10BO94823 1461 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 ERCC6Q03468 1493 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 RALGAPBQ86X10 1494 aa8.05□□□□□ -1.12
CHMP4A-210ENST00000552620 C9orf84Q5VXU9 1444 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 KIF14Q15058 1648 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 APLP1P51693 650 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 RALBP1Q15311 655 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 BRICD5Q6PL45 260 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 BLOC1S3Q6QNY0 202 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 SCUBE3Q8IX30 993 aa8.04□□□□□ -1.12
CHMP4A-210ENST00000552620 PTPRGP23470 1445 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 ARHGEF5Q12774 1597 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 PDE4CQ08493 712 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 CARD11Q9BXL7 1154 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 NUDCQ9Y266 331 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 RNF123Q5XPI4 1314 aa8.03□□□□□ -1.12
CHMP4A-210ENST00000552620 KDM5CP41229 1560 aa8.02□□□□□ -1.13
CHMP4A-210ENST00000552620 KIF15Q9NS87 1388 aa8.02□□□□□ -1.13
CHMP4A-210ENST00000552620 SEMA3FQ13275 785 aa8.02□□□□□ -1.13
CHMP4A-210ENST00000552620 ADAMTS19Q8TE59 1207 aa8.02□□□□□ -1.13
CHMP4A-210ENST00000552620 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
CHMP4A-210ENST00000552620 TRAIPQ9BWF2 469 aa8.02□□□□□ -1.13
CHMP4A-210ENST00000552620 CDC42BPAQ5VT25 1732 aa8.01□□□□□ -1.13
CHMP4A-210ENST00000552620 JUNDP17535 347 aa8.01□□□□□ -1.13
CHMP4A-210ENST00000552620 PTPRNQ16849 979 aa8.01□□□□□ -1.13
CHMP4A-210ENST00000552620 TMC1Q8TDI8 760 aa8.01□□□□□ -1.13
CHMP4A-210ENST00000552620 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
CHMP4A-210ENST00000552620 ALG2Q9H553 416 aa8.01□□□□□ -1.13
CHMP4A-210ENST00000552620 BRD4O60885 1362 aaPredicted RBP8□□□□□ -1.13
CHMP4A-210ENST00000552620 IRX6P78412 446 aaPredicted RBP8□□□□□ -1.13
CHMP4A-210ENST00000552620 THAP11Q96EK4 314 aa8□□□□□ -1.13
CHMP4A-210ENST00000552620 ZC3H4Q9UPT8 1303 aaKnown RBP8□□□□□ -1.13
CHMP4A-210ENST00000552620 WASHC2CQ9Y4E1 1318 aa8□□□□□ -1.13
CHMP4A-210ENST00000552620 HNRNPMP52272 730 aaKnown RBP eCLIP7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 NR1H3Q13133 447 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 MSS51Q4VC12 460 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 ZNF326Q5BKZ1 582 aaKnown RBP7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 BCORL1Q5H9F3 1711 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 WBP1LQ9NX94 342 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 FKBPLQ9UIM3 349 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 CCDC141Q6ZP82 1450 aa7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 MYBBP1AQ9BQG0 1328 aaKnown RBP7.99□□□□□ -1.13
CHMP4A-210ENST00000552620 INSRP06213 1382 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 ST20-MTHFSA0A0A6YYL1 179 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 F12P00748 615 aaPredicted RBP7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 CTHP32929 405 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 NYAP1Q6ZVC0 841 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 DCAF11Q8TEB1 546 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 SPSB2Q99619 263 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 PLA2G2EQ9NZK7 142 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 PLEKHH2Q8IVE3 1493 aa7.98□□□□□ -1.13
CHMP4A-210ENST00000552620 LRPPRCP42704 1394 aaKnown RBP7.97□□□□□ -1.13
CHMP4A-210ENST00000552620 MAST1Q9Y2H9 1570 aa7.97□□□□□ -1.13
CHMP4A-210ENST00000552620 RFX1P22670 979 aa7.97□□□□□ -1.13
CHMP4A-210ENST00000552620 ARMC2Q8NEN0 867 aa7.97□□□□□ -1.13
CHMP4A-210ENST00000552620 POLR3GLQ9BT43 218 aa7.97□□□□□ -1.13
CHMP4A-210ENST00000552620 GPRASP1Q5JY77 1395 aa7.97□□□□□ -1.13
CHMP4A-210ENST00000552620 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-210ENST00000552620 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
CHMP4A-210ENST00000552620 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.14
CHMP4A-210ENST00000552620 B4GALNT3Q6L9W6 998 aa7.96□□□□□ -1.14
CHMP4A-210ENST00000552620 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
CHMP4A-210ENST00000552620 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 FAM135AQ9P2D6 1515 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 COPS2P61201 443 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 NUDT12Q9BQG2 462 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 MAP10Q9P2G4 905 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 PRAG1Q86YV5 1406 aa7.95□□□□□ -1.14
CHMP4A-210ENST00000552620 PREX2Q70Z35 1606 aa7.94□□□□□ -1.14
CHMP4A-210ENST00000552620 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.94□□□□□ -1.14
CHMP4A-210ENST00000552620 DXOO77932 396 aaKnown RBP7.94□□□□□ -1.14
CHMP4A-210ENST00000552620 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms