RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 PTGER2P43116 358 aa19.12■□□□□ 0.65
SMARCC2-212ENST00000552566 ZNF827Q17R98 1081 aa19.12■□□□□ 0.65
SMARCC2-212ENST00000552566 MTFR1LQ9H019 292 aa19.12■□□□□ 0.65
SMARCC2-212ENST00000552566 PPM1GO15355 546 aaPredicted RBP19.11■□□□□ 0.65
SMARCC2-212ENST00000552566 KCNQ4P56696 695 aa19.11■□□□□ 0.65
SMARCC2-212ENST00000552566 MEGF6O75095 1541 aa19.1■□□□□ 0.65
SMARCC2-212ENST00000552566 NSD3Q9BZ95 1437 aa19.09■□□□□ 0.65
SMARCC2-212ENST00000552566 NHSQ6T4R5 1651 aa19.09■□□□□ 0.65
SMARCC2-212ENST00000552566 TATP17735 454 aaPredicted RBP19.09■□□□□ 0.65
SMARCC2-212ENST00000552566 YY1P25490 414 aa19.09■□□□□ 0.65
SMARCC2-212ENST00000552566 SLC27A3Q5K4L6 730 aa19.09■□□□□ 0.65
SMARCC2-212ENST00000552566 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
SMARCC2-212ENST00000552566 INSRP06213 1382 aa19.07■□□□□ 0.64
SMARCC2-212ENST00000552566 FLT4P35916 1363 aa19.07■□□□□ 0.64
SMARCC2-212ENST00000552566 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
SMARCC2-212ENST00000552566 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
SMARCC2-212ENST00000552566 AKT1S1Q96B36 256 aa19.06■□□□□ 0.64
SMARCC2-212ENST00000552566 TFCP2L1Q9NZI6 479 aa19.06■□□□□ 0.64
SMARCC2-212ENST00000552566 CASZ1Q86V15 1759 aa19.04■□□□□ 0.64
SMARCC2-212ENST00000552566 ARXQ96QS3 562 aa19.04■□□□□ 0.64
SMARCC2-212ENST00000552566 SGIP1Q9BQI5 828 aa19.04■□□□□ 0.64
SMARCC2-212ENST00000552566 SYT17Q9BSW7 474 aa19.04■□□□□ 0.64
SMARCC2-212ENST00000552566 CCNL1Q9UK58 526 aaPredicted RBP19.04■□□□□ 0.64
SMARCC2-212ENST00000552566 NSD2O96028 1365 aa19.03■□□□□ 0.64
SMARCC2-212ENST00000552566 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
SMARCC2-212ENST00000552566 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
SMARCC2-212ENST00000552566 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
SMARCC2-212ENST00000552566 TNNT2P45379 298 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-212ENST00000552566 KLHL34Q8N239 644 aa19.02■□□□□ 0.64
SMARCC2-212ENST00000552566 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
SMARCC2-212ENST00000552566 MSH5O43196 834 aa19.01■□□□□ 0.63
SMARCC2-212ENST00000552566 PNPLA7Q6ZV29 1317 aa19■□□□□ 0.63
SMARCC2-212ENST00000552566 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
SMARCC2-212ENST00000552566 CYP27B1O15528 508 aa18.99■□□□□ 0.63
SMARCC2-212ENST00000552566 POLD1P28340 1107 aa18.99■□□□□ 0.63
SMARCC2-212ENST00000552566 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
SMARCC2-212ENST00000552566 BTAF1O14981 1849 aa18.99■□□□□ 0.63
SMARCC2-212ENST00000552566 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
SMARCC2-212ENST00000552566 PAPPAQ13219 1627 aa18.98■□□□□ 0.63
SMARCC2-212ENST00000552566 WASHC2AQ641Q2 1341 aa18.98■□□□□ 0.63
SMARCC2-212ENST00000552566 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
SMARCC2-212ENST00000552566 SPG7Q9UQ90 795 aa18.97■□□□□ 0.63
SMARCC2-212ENST00000552566 MYOM1P52179 1685 aa18.97■□□□□ 0.63
SMARCC2-212ENST00000552566 EYA1Q99502 592 aa18.96■□□□□ 0.63
SMARCC2-212ENST00000552566 PANK3Q9H999 370 aa18.95■□□□□ 0.62
SMARCC2-212ENST00000552566 PALLDQ8WX93 1383 aa18.94■□□□□ 0.62
SMARCC2-212ENST00000552566 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
SMARCC2-212ENST00000552566 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
SMARCC2-212ENST00000552566 DOT1LQ8TEK3 1739 aa18.92■□□□□ 0.62
SMARCC2-212ENST00000552566 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
SMARCC2-212ENST00000552566 GPR162Q16538 588 aa18.92■□□□□ 0.62
SMARCC2-212ENST00000552566 MSL1Q68DK7 614 aa18.92■□□□□ 0.62
SMARCC2-212ENST00000552566 PELP1Q8IZL8 1130 aaKnown RBP18.92■□□□□ 0.62
SMARCC2-212ENST00000552566 SMARCC1Q92922 1105 aaPredicted RBP18.92■□□□□ 0.62
SMARCC2-212ENST00000552566 RGPD2P0DJD1 1756 aa18.91■□□□□ 0.62
SMARCC2-212ENST00000552566 PIGBQ92521 554 aa18.91■□□□□ 0.62
SMARCC2-212ENST00000552566 KIF20BQ96Q89 1820 aa18.9■□□□□ 0.62
SMARCC2-212ENST00000552566 NKX1-1Q15270 411 aaPredicted RBP18.89■□□□□ 0.61
SMARCC2-212ENST00000552566 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
SMARCC2-212ENST00000552566 MAP3K5Q99683 1374 aa18.89■□□□□ 0.61
SMARCC2-212ENST00000552566 HMGB2P26583 209 aaKnown RBP18.88■□□□□ 0.61
SMARCC2-212ENST00000552566 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
SMARCC2-212ENST00000552566 IFNL2Q8IZJ0 200 aa18.88■□□□□ 0.61
SMARCC2-212ENST00000552566 AK7Q96M32 723 aa18.88■□□□□ 0.61
SMARCC2-212ENST00000552566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.611e-7■■■□□ 18.2
SMARCC2-212ENST00000552566 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
SMARCC2-212ENST00000552566 PHF14O94880 888 aa18.87■□□□□ 0.61
SMARCC2-212ENST00000552566 PHKG2P15735 406 aa18.87■□□□□ 0.61
SMARCC2-212ENST00000552566 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
SMARCC2-212ENST00000552566 NLGN2Q8NFZ4 835 aa18.87■□□□□ 0.61
SMARCC2-212ENST00000552566 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
SMARCC2-212ENST00000552566 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
SMARCC2-212ENST00000552566 ASAP1Q9ULH1 1129 aa18.85■□□□□ 0.61
SMARCC2-212ENST00000552566 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
SMARCC2-212ENST00000552566 LOC102724428A0A0B4J2F2 783 aa18.84■□□□□ 0.61
SMARCC2-212ENST00000552566 SIK1P57059 783 aa18.84■□□□□ 0.61
SMARCC2-212ENST00000552566 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
SMARCC2-212ENST00000552566 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
SMARCC2-212ENST00000552566 IGSF1Q8N6C5 1336 aa18.82■□□□□ 0.6
SMARCC2-212ENST00000552566 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
SMARCC2-212ENST00000552566 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
SMARCC2-212ENST00000552566 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
SMARCC2-212ENST00000552566 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
SMARCC2-212ENST00000552566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.81■□□□□ 0.6
SMARCC2-212ENST00000552566 ATP6V1AP38606 617 aa18.81■□□□□ 0.6
SMARCC2-212ENST00000552566 LY75O60449 1722 aa18.8■□□□□ 0.6
SMARCC2-212ENST00000552566 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
SMARCC2-212ENST00000552566 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
SMARCC2-212ENST00000552566 GNPATO15228 680 aa18.79■□□□□ 0.6
SMARCC2-212ENST00000552566 ITPK1Q13572 414 aa18.79■□□□□ 0.6
SMARCC2-212ENST00000552566 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
SMARCC2-212ENST00000552566 HSP90AB1P08238 724 aaKnown RBP18.78■□□□□ 0.6
SMARCC2-212ENST00000552566 DCAF5Q96JK2 942 aa18.78■□□□□ 0.6
SMARCC2-212ENST00000552566 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
SMARCC2-212ENST00000552566 SSFA2P28290 1259 aa18.77■□□□□ 0.6
SMARCC2-212ENST00000552566 CABP4P57796 275 aa18.77■□□□□ 0.6
SMARCC2-212ENST00000552566 AMOTQ4VCS5 1084 aa18.77■□□□□ 0.6
SMARCC2-212ENST00000552566 ERVV-2B6SEH9 535 aa18.76■□□□□ 0.59
SMARCC2-212ENST00000552566 YBX3P16989 372 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMARCC2-212ENST00000552566 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms