RNA–Protein interactions for RNA: ENST00000552540.5

NACA-221, Transcript of nascent polypeptide associated complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NACA, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NACA-221ENST00000552540 NCAPD2Q15021 1401 aa18.96■□□□□ 0.63
NACA-221ENST00000552540 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
NACA-221ENST00000552540 TRIM37O94972 964 aa18.95■□□□□ 0.62
NACA-221ENST00000552540 HMOX1P09601 288 aa18.95■□□□□ 0.62
NACA-221ENST00000552540 SF3B2Q13435 895 aaKnown RBP18.94■□□□□ 0.62
NACA-221ENST00000552540 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
NACA-221ENST00000552540 SHANK3Q9BYB0 1731 aa18.92■□□□□ 0.62
NACA-221ENST00000552540 ACSBG1Q96GR2 724 aa18.92■□□□□ 0.62
NACA-221ENST00000552540 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
NACA-221ENST00000552540 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
NACA-221ENST00000552540 CCDC125Q86Z20 511 aa18.91■□□□□ 0.62
NACA-221ENST00000552540 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
NACA-221ENST00000552540 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
NACA-221ENST00000552540 PCDH11XQ9BZA7 1347 aa18.9■□□□□ 0.62
NACA-221ENST00000552540 PCDH11YQ9BZA8 1340 aa18.9■□□□□ 0.62
NACA-221ENST00000552540 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
NACA-221ENST00000552540 CYP27B1O15528 508 aa18.88■□□□□ 0.61
NACA-221ENST00000552540 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
NACA-221ENST00000552540 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
NACA-221ENST00000552540 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
NACA-221ENST00000552540 PTF1AQ7RTS3 328 aa18.88■□□□□ 0.61
NACA-221ENST00000552540 DEFB132Q7Z7B7 95 aa18.88■□□□□ 0.61
NACA-221ENST00000552540 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
NACA-221ENST00000552540 KCNQ2O43526 872 aa18.87■□□□□ 0.61
NACA-221ENST00000552540 APBA3O96018 575 aa18.87■□□□□ 0.61
NACA-221ENST00000552540 KDRP35968 1356 aa18.87■□□□□ 0.61
NACA-221ENST00000552540 ANP32CO43423 234 aa18.86■□□□□ 0.61
NACA-221ENST00000552540 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
NACA-221ENST00000552540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.613e-16■■□□□ 13.3
NACA-221ENST00000552540 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
NACA-221ENST00000552540 BAG6P46379 1132 aa18.85■□□□□ 0.61
NACA-221ENST00000552540 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
NACA-221ENST00000552540 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
NACA-221ENST00000552540 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
NACA-221ENST00000552540 BCL9O00512 1426 aa18.84■□□□□ 0.61
NACA-221ENST00000552540 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
NACA-221ENST00000552540 IFNL2Q8IZJ0 200 aa18.84■□□□□ 0.61
NACA-221ENST00000552540 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
NACA-221ENST00000552540 PHKG2P15735 406 aa18.83■□□□□ 0.6
NACA-221ENST00000552540 PRIM1P49642 420 aaKnown RBP18.83■□□□□ 0.6
NACA-221ENST00000552540 DOT1LQ8TEK3 1739 aa18.83■□□□□ 0.6
NACA-221ENST00000552540 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
NACA-221ENST00000552540 NHSQ6T4R5 1651 aa18.82■□□□□ 0.6
NACA-221ENST00000552540 EP400Q96L91 3159 aa18.81■□□□□ 0.6
NACA-221ENST00000552540 C1orf141Q5JVX7 400 aa18.81■□□□□ 0.6
NACA-221ENST00000552540 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
NACA-221ENST00000552540 EZH2Q15910 746 aaKnown RBP18.8■□□□□ 0.6
NACA-221ENST00000552540 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
NACA-221ENST00000552540 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
NACA-221ENST00000552540 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
NACA-221ENST00000552540 FCHSD2O94868 740 aa18.78■□□□□ 0.6
NACA-221ENST00000552540 MPRIPQ6WCQ1 1025 aa18.78■□□□□ 0.6
NACA-221ENST00000552540 PHACTR3Q96KR7 559 aa18.78■□□□□ 0.6
NACA-221ENST00000552540 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
NACA-221ENST00000552540 CCDC184Q52MB2 194 aa18.77■□□□□ 0.6
NACA-221ENST00000552540 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
NACA-221ENST00000552540 BTAF1O14981 1849 aa18.77■□□□□ 0.59
NACA-221ENST00000552540 HSP90AB1P08238 724 aaKnown RBP18.76■□□□□ 0.59
NACA-221ENST00000552540 WDR43Q15061 677 aaKnown RBP eCLIP18.76■□□□□ 0.598e-6■■□□□ 11.7
NACA-221ENST00000552540 AKAP4Q5JQC9 854 aa18.76■□□□□ 0.59
NACA-221ENST00000552540 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
NACA-221ENST00000552540 ITGB4P16144 1822 aa18.74■□□□□ 0.59
NACA-221ENST00000552540 PLSCR1O15162 318 aa18.74■□□□□ 0.59
NACA-221ENST00000552540 NEFMP07197 916 aa18.74■□□□□ 0.59
NACA-221ENST00000552540 GAS2L2Q8NHY3 880 aa18.74■□□□□ 0.59
NACA-221ENST00000552540 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
NACA-221ENST00000552540 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
NACA-221ENST00000552540 TMOD3Q9NYL9 352 aa18.73■□□□□ 0.59
NACA-221ENST00000552540 CABP4P57796 275 aa18.72■□□□□ 0.59
NACA-221ENST00000552540 CCDC146Q8IYE0 955 aa18.72■□□□□ 0.59
NACA-221ENST00000552540 PIGBQ92521 554 aa18.72■□□□□ 0.59
NACA-221ENST00000552540 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
NACA-221ENST00000552540 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
NACA-221ENST00000552540 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
NACA-221ENST00000552540 ADAMTS8Q9UP79 889 aa18.71■□□□□ 0.59
NACA-221ENST00000552540 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
NACA-221ENST00000552540 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
NACA-221ENST00000552540 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
NACA-221ENST00000552540 RNMTO43148 476 aaKnown RBP18.7■□□□□ 0.58
NACA-221ENST00000552540 TXNRD1Q16881 649 aa18.7■□□□□ 0.58
NACA-221ENST00000552540 PROM2Q8N271 834 aa18.7■□□□□ 0.58
NACA-221ENST00000552540 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
NACA-221ENST00000552540 SCN11AQ9UI33 1791 aa18.69■□□□□ 0.58
NACA-221ENST00000552540 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
NACA-221ENST00000552540 KCNQ4P56696 695 aa18.68■□□□□ 0.58
NACA-221ENST00000552540 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
NACA-221ENST00000552540 RREB1Q92766 1687 aa18.68■□□□□ 0.58
NACA-221ENST00000552540 RGPD3A6NKT7 1758 aaPredicted RBP18.68■□□□□ 0.58
NACA-221ENST00000552540 RGPD4Q7Z3J3 1758 aa18.68■□□□□ 0.58
NACA-221ENST00000552540 ASAP1Q9ULH1 1129 aa18.67■□□□□ 0.58
NACA-221ENST00000552540 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
NACA-221ENST00000552540 DIEXFQ68CQ4 756 aaKnown RBP18.66■□□□□ 0.58
NACA-221ENST00000552540 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
NACA-221ENST00000552540 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
NACA-221ENST00000552540 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
NACA-221ENST00000552540 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
NACA-221ENST00000552540 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
NACA-221ENST00000552540 MCM10Q7L590 875 aa18.65■□□□□ 0.58
NACA-221ENST00000552540 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
NACA-221ENST00000552540 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms