RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 IL13P35225 146 aa17.69■□□□□ 0.42
CDK4-212ENST00000552388 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
CDK4-212ENST00000552388 PRKRIP1Q9H875 184 aaPredicted RBP17.69■□□□□ 0.42
CDK4-212ENST00000552388 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
CDK4-212ENST00000552388 EZH2Q15910 746 aaKnown RBP17.68■□□□□ 0.42
CDK4-212ENST00000552388 TNS2Q63HR2 1409 aa17.68■□□□□ 0.42
CDK4-212ENST00000552388 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
CDK4-212ENST00000552388 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
CDK4-212ENST00000552388 R3HDM1Q15032 1099 aaKnown RBP17.67■□□□□ 0.42
CDK4-212ENST00000552388 DDB1Q16531 1140 aa17.67■□□□□ 0.42
CDK4-212ENST00000552388 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
CDK4-212ENST00000552388 SBF2Q86WG5 1849 aa17.67■□□□□ 0.42
CDK4-212ENST00000552388 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
CDK4-212ENST00000552388 OVOS2A0A0G2JMS6 1433 aa17.66■□□□□ 0.42
CDK4-212ENST00000552388 KDRP35968 1356 aa17.66■□□□□ 0.42
CDK4-212ENST00000552388 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
CDK4-212ENST00000552388 PLEKHG2Q9H7P9 1386 aa17.65■□□□□ 0.42
CDK4-212ENST00000552388 EXOC5O00471 708 aa17.64■□□□□ 0.41
CDK4-212ENST00000552388 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
CDK4-212ENST00000552388 TRIM37O94972 964 aa17.63■□□□□ 0.41
CDK4-212ENST00000552388 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
CDK4-212ENST00000552388 BCL9O00512 1426 aa17.61■□□□□ 0.41
CDK4-212ENST00000552388 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
CDK4-212ENST00000552388 SULT6B1Q6IMI4 303 aa17.6■□□□□ 0.41
CDK4-212ENST00000552388 AEBP1Q8IUX7 1158 aa17.6■□□□□ 0.41
CDK4-212ENST00000552388 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
CDK4-212ENST00000552388 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
CDK4-212ENST00000552388 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
CDK4-212ENST00000552388 ANP32CO43423 234 aa17.59■□□□□ 0.41
CDK4-212ENST00000552388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK4-212ENST00000552388 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
CDK4-212ENST00000552388 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
CDK4-212ENST00000552388 APBA3O96018 575 aa17.58■□□□□ 0.4
CDK4-212ENST00000552388 KAT6BQ8WYB5 2073 aa17.57■□□□□ 0.4
CDK4-212ENST00000552388 DOT1LQ8TEK3 1739 aa17.57■□□□□ 0.4
CDK4-212ENST00000552388 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
CDK4-212ENST00000552388 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
CDK4-212ENST00000552388 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
CDK4-212ENST00000552388 HMOX1P09601 288 aa17.56■□□□□ 0.4
CDK4-212ENST00000552388 DDX54Q8TDD1 881 aaKnown RBP17.55■□□□□ 0.4
CDK4-212ENST00000552388 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
CDK4-212ENST00000552388 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
CDK4-212ENST00000552388 ITGB4P16144 1822 aa17.54■□□□□ 0.4
CDK4-212ENST00000552388 AMOTQ4VCS5 1084 aa17.54■□□□□ 0.4
CDK4-212ENST00000552388 CYP27B1O15528 508 aa17.53■□□□□ 0.4
CDK4-212ENST00000552388 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
CDK4-212ENST00000552388 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
CDK4-212ENST00000552388 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
CDK4-212ENST00000552388 SCN11AQ9UI33 1791 aa17.53■□□□□ 0.4
CDK4-212ENST00000552388 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
CDK4-212ENST00000552388 BTAF1O14981 1849 aa17.51■□□□□ 0.39
CDK4-212ENST00000552388 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
CDK4-212ENST00000552388 PLSCR1O15162 318 aa17.51■□□□□ 0.39
CDK4-212ENST00000552388 FCHSD2O94868 740 aa17.51■□□□□ 0.39
CDK4-212ENST00000552388 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
CDK4-212ENST00000552388 PHKG2P15735 406 aa17.5■□□□□ 0.39
CDK4-212ENST00000552388 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
CDK4-212ENST00000552388 ADAMTS7Q9UKP4 1686 aa17.49■□□□□ 0.39
CDK4-212ENST00000552388 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
CDK4-212ENST00000552388 NBPF14Q5TI25 921 aa17.48■□□□□ 0.39
CDK4-212ENST00000552388 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
CDK4-212ENST00000552388 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
CDK4-212ENST00000552388 ZNF530Q6P9A1 599 aaPredicted RBP17.47■□□□□ 0.39
CDK4-212ENST00000552388 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
CDK4-212ENST00000552388 PAPPAQ13219 1627 aa17.47■□□□□ 0.39
CDK4-212ENST00000552388 KCNQ2O43526 872 aa17.46■□□□□ 0.39
CDK4-212ENST00000552388 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
CDK4-212ENST00000552388 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
CDK4-212ENST00000552388 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
CDK4-212ENST00000552388 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
CDK4-212ENST00000552388 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
CDK4-212ENST00000552388 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
CDK4-212ENST00000552388 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
CDK4-212ENST00000552388 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
CDK4-212ENST00000552388 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
CDK4-212ENST00000552388 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
CDK4-212ENST00000552388 LY75O60449 1722 aa17.44■□□□□ 0.38
CDK4-212ENST00000552388 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDK4-212ENST00000552388 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
CDK4-212ENST00000552388 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
CDK4-212ENST00000552388 KDM6AO15550 1401 aaPredicted RBP17.44■□□□□ 0.38
CDK4-212ENST00000552388 PROM2Q8N271 834 aa17.43■□□□□ 0.38
CDK4-212ENST00000552388 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
CDK4-212ENST00000552388 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
CDK4-212ENST00000552388 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
CDK4-212ENST00000552388 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
CDK4-212ENST00000552388 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
CDK4-212ENST00000552388 UTRNP46939 3433 aa17.42■□□□□ 0.38
CDK4-212ENST00000552388 NEFMP07197 916 aa17.41■□□□□ 0.38
CDK4-212ENST00000552388 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
CDK4-212ENST00000552388 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
CDK4-212ENST00000552388 MRC1P22897 1456 aa17.4■□□□□ 0.38
CDK4-212ENST00000552388 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
CDK4-212ENST00000552388 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
CDK4-212ENST00000552388 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
CDK4-212ENST00000552388 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
CDK4-212ENST00000552388 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
CDK4-212ENST00000552388 YY1P25490 414 aa17.39■□□□□ 0.37
CDK4-212ENST00000552388 PTGER2P43116 358 aa17.39■□□□□ 0.37
CDK4-212ENST00000552388 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms