RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 USHBP1Q8N6Y0 703 aa13.97□□□□□ -0.17
PFDN5-216ENST00000552341 GAS2L2Q8NHY3 880 aa13.97□□□□□ -0.17
PFDN5-216ENST00000552341 SLAIN2Q9P270 581 aa13.97□□□□□ -0.17
PFDN5-216ENST00000552341 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
PFDN5-216ENST00000552341 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.17
PFDN5-216ENST00000552341 HTATSF1O43719 755 aaKnown RBP13.96□□□□□ -0.18
PFDN5-216ENST00000552341 CANXP27824 592 aaKnown RBP13.96□□□□□ -0.18
PFDN5-216ENST00000552341 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.18
PFDN5-216ENST00000552341 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.18
PFDN5-216ENST00000552341 COG6Q9Y2V7 657 aa13.96□□□□□ -0.18
PFDN5-216ENST00000552341 LMO7Q8WWI1 1683 aa13.96□□□□□ -0.18
PFDN5-216ENST00000552341 ZBTB7CA1YPR0 619 aa13.95□□□□□ -0.18
PFDN5-216ENST00000552341 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
PFDN5-216ENST00000552341 ZKSCAN2Q63HK3 967 aa13.95□□□□□ -0.18
PFDN5-216ENST00000552341 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
PFDN5-216ENST00000552341 TRIM27P14373 513 aa13.94□□□□□ -0.18
PFDN5-216ENST00000552341 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
PFDN5-216ENST00000552341 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
PFDN5-216ENST00000552341 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
PFDN5-216ENST00000552341 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
PFDN5-216ENST00000552341 CABLES1Q8TDN4 633 aa13.93□□□□□ -0.18
PFDN5-216ENST00000552341 NOB1Q9ULX3 412 aaKnown RBP13.93□□□□□ -0.18
PFDN5-216ENST00000552341 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
PFDN5-216ENST00000552341 ERBB3P21860 1342 aa13.93□□□□□ -0.18
PFDN5-216ENST00000552341 ABCC6O95255 1503 aa13.93□□□□□ -0.18
PFDN5-216ENST00000552341 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
PFDN5-216ENST00000552341 RTF1Q92541 710 aaKnown RBP13.92□□□□□ -0.18
PFDN5-216ENST00000552341 CLUAP1Q96AJ1 413 aa13.92□□□□□ -0.18
PFDN5-216ENST00000552341 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
PFDN5-216ENST00000552341 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
PFDN5-216ENST00000552341 KIF16BQ96L93 1317 aa13.92□□□□□ -0.18
PFDN5-216ENST00000552341 ELL2O00472 640 aaPredicted RBP13.92□□□□□ -0.18
PFDN5-216ENST00000552341 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
PFDN5-216ENST00000552341 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
PFDN5-216ENST00000552341 IL17REQ8NFR9 667 aa13.92□□□□□ -0.18
PFDN5-216ENST00000552341 CPDO75976 1380 aa13.91□□□□□ -0.18
PFDN5-216ENST00000552341 AAMPQ13685 434 aa13.91□□□□□ -0.18
PFDN5-216ENST00000552341 MVPQ14764 893 aaKnown RBP13.91□□□□□ -0.18
PFDN5-216ENST00000552341 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
PFDN5-216ENST00000552341 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
PFDN5-216ENST00000552341 CEMIPQ8WUJ3 1361 aa13.9□□□□□ -0.18
PFDN5-216ENST00000552341 MS4A1P11836 297 aa13.9□□□□□ -0.18
PFDN5-216ENST00000552341 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
PFDN5-216ENST00000552341 CENPQQ7L2Z9 268 aaPredicted RBP13.89□□□□□ -0.19
PFDN5-216ENST00000552341 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
PFDN5-216ENST00000552341 ARHGAP45Q92619 1136 aa13.89□□□□□ -0.19
PFDN5-216ENST00000552341 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
PFDN5-216ENST00000552341 IGHDP01880 384 aa13.88□□□□□ -0.19
PFDN5-216ENST00000552341 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
PFDN5-216ENST00000552341 LTBP4Q8N2S1 1624 aa13.87□□□□□ -0.19
PFDN5-216ENST00000552341 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
PFDN5-216ENST00000552341 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
PFDN5-216ENST00000552341 VIRMAQ69YN4 1812 aaKnown RBP13.87□□□□□ -0.19
PFDN5-216ENST00000552341 TMEM57Q8N5G2 664 aa13.87□□□□□ -0.19
PFDN5-216ENST00000552341 BABAM1Q9NWV8 329 aa13.87□□□□□ -0.19
PFDN5-216ENST00000552341 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
PFDN5-216ENST00000552341 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
PFDN5-216ENST00000552341 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
PFDN5-216ENST00000552341 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
PFDN5-216ENST00000552341 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
PFDN5-216ENST00000552341 ADAMTS7Q9UKP4 1686 aa13.86□□□□□ -0.19
PFDN5-216ENST00000552341 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
PFDN5-216ENST00000552341 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
PFDN5-216ENST00000552341 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
PFDN5-216ENST00000552341 SKAP1Q86WV1 359 aa13.85□□□□□ -0.19
PFDN5-216ENST00000552341 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
PFDN5-216ENST00000552341 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
PFDN5-216ENST00000552341 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
PFDN5-216ENST00000552341 ZNF530Q6P9A1 599 aaPredicted RBP13.84□□□□□ -0.19
PFDN5-216ENST00000552341 ABCC4O15439 1325 aa13.84□□□□□ -0.19
PFDN5-216ENST00000552341 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.19
PFDN5-216ENST00000552341 RGS12O14924 1447 aa13.83□□□□□ -0.19
PFDN5-216ENST00000552341 SIPA1L3O60292 1781 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-216ENST00000552341 MEGF6O75095 1541 aa13.83□□□□□ -0.2
PFDN5-216ENST00000552341 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
PFDN5-216ENST00000552341 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
PFDN5-216ENST00000552341 ZBTB40Q9NUA8 1239 aa13.83□□□□□ -0.2
PFDN5-216ENST00000552341 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
PFDN5-216ENST00000552341 NLRP2Q9NX02 1062 aa13.82□□□□□ -0.2
PFDN5-216ENST00000552341 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
PFDN5-216ENST00000552341 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
PFDN5-216ENST00000552341 MPRIPQ6WCQ1 1025 aa13.81□□□□□ -0.2
PFDN5-216ENST00000552341 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-216ENST00000552341 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-216ENST00000552341 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
PFDN5-216ENST00000552341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.8□□□□□ -0.2
PFDN5-216ENST00000552341 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-216ENST00000552341 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-216ENST00000552341 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
PFDN5-216ENST00000552341 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
PFDN5-216ENST00000552341 CACNA1FO60840 1977 aa13.79□□□□□ -0.2
PFDN5-216ENST00000552341 C1orf141Q5JVX7 400 aa13.79□□□□□ -0.2
PFDN5-216ENST00000552341 RAPGEF4Q8WZA2 1011 aa13.79□□□□□ -0.2
PFDN5-216ENST00000552341 PTPRCP08575 1304 aa13.78□□□□□ -0.2
PFDN5-216ENST00000552341 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
PFDN5-216ENST00000552341 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
PFDN5-216ENST00000552341 CSB-PGBD3P0DP91 1061 aa13.78□□□□□ -0.2
PFDN5-216ENST00000552341 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
PFDN5-216ENST00000552341 TATP17735 454 aaPredicted RBP13.78□□□□□ -0.2
PFDN5-216ENST00000552341 G2E3Q7L622 706 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms