RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 LRRC37A3O60309 1634 aa17.59■□□□□ 0.41
CHPT1-207ENST00000552213 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
CHPT1-207ENST00000552213 HMOX1P09601 288 aa17.59■□□□□ 0.41
CHPT1-207ENST00000552213 SPG7Q9UQ90 795 aa17.59■□□□□ 0.41
CHPT1-207ENST00000552213 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.41
CHPT1-207ENST00000552213 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHPT1-207ENST00000552213 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
CHPT1-207ENST00000552213 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHPT1-207ENST00000552213 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
CHPT1-207ENST00000552213 WNK3Q9BYP7 1800 aa17.56■□□□□ 0.4
CHPT1-207ENST00000552213 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
CHPT1-207ENST00000552213 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
CHPT1-207ENST00000552213 PLEKHO1Q53GL0 409 aaPredicted RBP17.56■□□□□ 0.4
CHPT1-207ENST00000552213 TRIM37O94972 964 aa17.55■□□□□ 0.4
CHPT1-207ENST00000552213 CCDC125Q86Z20 511 aa17.55■□□□□ 0.4
CHPT1-207ENST00000552213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHPT1-207ENST00000552213 KDRP35968 1356 aa17.54■□□□□ 0.4
CHPT1-207ENST00000552213 AMOTQ4VCS5 1084 aa17.54■□□□□ 0.4
CHPT1-207ENST00000552213 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
CHPT1-207ENST00000552213 PLEKHG2Q9H7P9 1386 aa17.52■□□□□ 0.39
CHPT1-207ENST00000552213 CYP27B1O15528 508 aa17.51■□□□□ 0.39
CHPT1-207ENST00000552213 RGPD1P0DJD0 1748 aa17.51■□□□□ 0.39
CHPT1-207ENST00000552213 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
CHPT1-207ENST00000552213 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
CHPT1-207ENST00000552213 BCL9O00512 1426 aa17.5■□□□□ 0.39
CHPT1-207ENST00000552213 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
CHPT1-207ENST00000552213 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
CHPT1-207ENST00000552213 FCHSD2O94868 740 aa17.49■□□□□ 0.39
CHPT1-207ENST00000552213 PHKG2P15735 406 aa17.49■□□□□ 0.39
CHPT1-207ENST00000552213 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHPT1-207ENST00000552213 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
CHPT1-207ENST00000552213 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
CHPT1-207ENST00000552213 APBA3O96018 575 aa17.48■□□□□ 0.39
CHPT1-207ENST00000552213 NEFMP07197 916 aa17.48■□□□□ 0.39
CHPT1-207ENST00000552213 ADRA2BP18089 450 aa17.48■□□□□ 0.39
CHPT1-207ENST00000552213 BAG6P46379 1132 aa17.48■□□□□ 0.39
CHPT1-207ENST00000552213 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
CHPT1-207ENST00000552213 KCNQ2O43526 872 aa17.47■□□□□ 0.39
CHPT1-207ENST00000552213 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
CHPT1-207ENST00000552213 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
CHPT1-207ENST00000552213 EP400Q96L91 3159 aa17.46■□□□□ 0.39
CHPT1-207ENST00000552213 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
CHPT1-207ENST00000552213 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
CHPT1-207ENST00000552213 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.39
CHPT1-207ENST00000552213 KCNA4P22459 653 aa17.45■□□□□ 0.38
CHPT1-207ENST00000552213 NKX1-1Q15270 411 aaPredicted RBP17.45■□□□□ 0.38
CHPT1-207ENST00000552213 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
CHPT1-207ENST00000552213 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
CHPT1-207ENST00000552213 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
CHPT1-207ENST00000552213 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
CHPT1-207ENST00000552213 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
CHPT1-207ENST00000552213 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
CHPT1-207ENST00000552213 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
CHPT1-207ENST00000552213 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
CHPT1-207ENST00000552213 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
CHPT1-207ENST00000552213 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
CHPT1-207ENST00000552213 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
CHPT1-207ENST00000552213 CCDC184Q52MB2 194 aa17.42■□□□□ 0.38
CHPT1-207ENST00000552213 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
CHPT1-207ENST00000552213 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
CHPT1-207ENST00000552213 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
CHPT1-207ENST00000552213 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
CHPT1-207ENST00000552213 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
CHPT1-207ENST00000552213 CABP4P57796 275 aa17.39■□□□□ 0.37
CHPT1-207ENST00000552213 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
CHPT1-207ENST00000552213 PLEKHF1Q96S99 279 aa17.39■□□□□ 0.37
CHPT1-207ENST00000552213 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
CHPT1-207ENST00000552213 PLSCR1O15162 318 aa17.38■□□□□ 0.37
CHPT1-207ENST00000552213 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
CHPT1-207ENST00000552213 NHSQ6T4R5 1651 aa17.37■□□□□ 0.37
CHPT1-207ENST00000552213 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
CHPT1-207ENST00000552213 PIGBQ92521 554 aa17.37■□□□□ 0.37
CHPT1-207ENST00000552213 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
CHPT1-207ENST00000552213 CAMKK2Q96RR4 588 aa17.37■□□□□ 0.37
CHPT1-207ENST00000552213 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
CHPT1-207ENST00000552213 KDM6AO15550 1401 aaPredicted RBP17.37■□□□□ 0.37
CHPT1-207ENST00000552213 DOT1LQ8TEK3 1739 aa17.36■□□□□ 0.37
CHPT1-207ENST00000552213 TNS1Q9HBL0 1735 aaKnown RBP17.36■□□□□ 0.37
CHPT1-207ENST00000552213 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
CHPT1-207ENST00000552213 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
CHPT1-207ENST00000552213 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
CHPT1-207ENST00000552213 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
CHPT1-207ENST00000552213 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
CHPT1-207ENST00000552213 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
CHPT1-207ENST00000552213 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
CHPT1-207ENST00000552213 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
CHPT1-207ENST00000552213 TEFQ10587 303 aa17.33■□□□□ 0.36
CHPT1-207ENST00000552213 IL17REQ8NFR9 667 aa17.33■□□□□ 0.36
CHPT1-207ENST00000552213 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.36
CHPT1-207ENST00000552213 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
CHPT1-207ENST00000552213 MCM10Q7L590 875 aa17.32■□□□□ 0.36
CHPT1-207ENST00000552213 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
CHPT1-207ENST00000552213 PALLDQ8WX93 1383 aa17.31■□□□□ 0.36
CHPT1-207ENST00000552213 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
CHPT1-207ENST00000552213 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
CHPT1-207ENST00000552213 RIPK4P57078 832 aa17.31■□□□□ 0.36
CHPT1-207ENST00000552213 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
CHPT1-207ENST00000552213 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
CHPT1-207ENST00000552213 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
CHPT1-207ENST00000552213 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms