RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 SPATA31A6Q5VVP1 1343 aa10.07□□□□□ -0.8
KRR1-204ENST00000550898 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
KRR1-204ENST00000550898 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
KRR1-204ENST00000550898 DDX17Q92841 729 aaKnown RBP10.06□□□□□ -0.8
KRR1-204ENST00000550898 MED1Q15648 1581 aaPredicted RBP10.05□□□□□ -0.8
KRR1-204ENST00000550898 NHSL1Q5SYE7 1610 aa10.05□□□□□ -0.8
KRR1-204ENST00000550898 DPYSL4O14531 572 aa10.05□□□□□ -0.8
KRR1-204ENST00000550898 FOXO3O43524 673 aa10.05□□□□□ -0.8
KRR1-204ENST00000550898 KIF1AQ12756 1690 aa10.04□□□□□ -0.8
KRR1-204ENST00000550898 SRPK2P78362 688 aaKnown RBP10.04□□□□□ -0.8
KRR1-204ENST00000550898 CDK19Q9BWU1 502 aa10.04□□□□□ -0.8
KRR1-204ENST00000550898 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
KRR1-204ENST00000550898 PRR36Q9H6K5 1346 aa10.04□□□□□ -0.8
KRR1-204ENST00000550898 ATP7BP35670 1465 aa10.04□□□□□ -0.8
KRR1-204ENST00000550898 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
KRR1-204ENST00000550898 PSME1Q06323 249 aa10.03□□□□□ -0.8
KRR1-204ENST00000550898 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
KRR1-204ENST00000550898 PXDNQ92626 1479 aa10.03□□□□□ -0.8
KRR1-204ENST00000550898 EVC2Q86UK5 1308 aa10.03□□□□□ -0.8
KRR1-204ENST00000550898 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.8
KRR1-204ENST00000550898 XPCQ01831 940 aaPredicted RBP10.02□□□□□ -0.81
KRR1-204ENST00000550898 MEX3CQ5U5Q3 659 aaKnown RBP10.02□□□□□ -0.81
KRR1-204ENST00000550898 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
KRR1-204ENST00000550898 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
KRR1-204ENST00000550898 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
KRR1-204ENST00000550898 MRPL50Q8N5N7 158 aaKnown RBP10.01□□□□□ -0.81
KRR1-204ENST00000550898 NGDNQ8NEJ9 315 aaKnown RBP10.01□□□□□ -0.81
KRR1-204ENST00000550898 WNT2BQ93097 391 aa10.01□□□□□ -0.81
KRR1-204ENST00000550898 SHPRHQ149N8 1683 aa10.01□□□□□ -0.81
KRR1-204ENST00000550898 SBNO1A3KN83 1393 aa10.01□□□□□ -0.81
KRR1-204ENST00000550898 USP32Q8NFA0 1604 aa10□□□□□ -0.81
KRR1-204ENST00000550898 TNS3Q68CZ2 1445 aa10□□□□□ -0.81
KRR1-204ENST00000550898 QRICH2Q9H0J4 1663 aa10□□□□□ -0.81
KRR1-204ENST00000550898 NUTM2BA6NNL0 878 aaPredicted RBP10□□□□□ -0.81
KRR1-204ENST00000550898 NUTM2EB1AL46 878 aaPredicted RBP10□□□□□ -0.81
KRR1-204ENST00000550898 PHF14O94880 888 aa10□□□□□ -0.81
KRR1-204ENST00000550898 NUTM2AQ8IVF1 878 aaPredicted RBP10□□□□□ -0.81
KRR1-204ENST00000550898 SPATA31A3Q5VYP0 1347 aa10□□□□□ -0.81
KRR1-204ENST00000550898 ARHGEF10O15013 1369 aa10□□□□□ -0.81
KRR1-204ENST00000550898 LRP6O75581 1613 aa10□□□□□ -0.81
KRR1-204ENST00000550898 ATAD2Q6PL18 1390 aa10□□□□□ -0.81
KRR1-204ENST00000550898 USP47Q96K76 1375 aa10□□□□□ -0.81
KRR1-204ENST00000550898 TYW1BQ6NUM6 668 aa9.99□□□□□ -0.81
KRR1-204ENST00000550898 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
KRR1-204ENST00000550898 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
KRR1-204ENST00000550898 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
KRR1-204ENST00000550898 POLR3AO14802 1390 aaPredicted RBP9.98□□□□□ -0.81
KRR1-204ENST00000550898 LMOD2Q6P5Q4 547 aa9.97□□□□□ -0.81
KRR1-204ENST00000550898 DDX12PQ92771 950 aa9.97□□□□□ -0.81
KRR1-204ENST00000550898 ACEP12821 1306 aa9.97□□□□□ -0.81
KRR1-204ENST00000550898 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.82
KRR1-204ENST00000550898 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
KRR1-204ENST00000550898 RABGEF1Q9UJ41 708 aa9.96□□□□□ -0.82
KRR1-204ENST00000550898 COL22A1Q8NFW1 1626 aaPredicted RBP9.96□□□□□ -0.82
KRR1-204ENST00000550898 TOPAZ1Q8N9V7 1692 aa9.96□□□□□ -0.82
KRR1-204ENST00000550898 ITSN1Q15811 1721 aa9.96□□□□□ -0.82
KRR1-204ENST00000550898 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
KRR1-204ENST00000550898 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
KRR1-204ENST00000550898 TMF1P82094 1093 aa9.95□□□□□ -0.82
KRR1-204ENST00000550898 ZNF772Q68DY9 489 aaPredicted RBP9.95□□□□□ -0.82
KRR1-204ENST00000550898 C8orf37Q96NL8 207 aa9.95□□□□□ -0.82
KRR1-204ENST00000550898 PUS7Q96PZ0 661 aaKnown RBP9.95□□□□□ -0.82
KRR1-204ENST00000550898 CABP1Q9NZU7 370 aa9.95□□□□□ -0.82
KRR1-204ENST00000550898 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
KRR1-204ENST00000550898 BRD4O60885 1362 aaPredicted RBP9.95□□□□□ -0.82
KRR1-204ENST00000550898 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
KRR1-204ENST00000550898 BCAMP50895 628 aa9.94□□□□□ -0.82
KRR1-204ENST00000550898 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
KRR1-204ENST00000550898 TESK2Q96S53 571 aa9.94□□□□□ -0.82
KRR1-204ENST00000550898 USP6P35125 1406 aa9.93□□□□□ -0.82
KRR1-204ENST00000550898 NINLQ9Y2I6 1382 aa9.93□□□□□ -0.82
KRR1-204ENST00000550898 AFF2P51816 1311 aa9.93□□□□□ -0.82
KRR1-204ENST00000550898 CDCA8Q53HL2 280 aa9.93□□□□□ -0.82
KRR1-204ENST00000550898 NBPF3Q9H094 633 aa9.93□□□□□ -0.82
KRR1-204ENST00000550898 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
KRR1-204ENST00000550898 EIF4G2P78344 907 aaKnown RBP eCLIP9.92□□□□□ -0.82
KRR1-204ENST00000550898 TSR1Q2NL82 804 aaKnown RBP9.92□□□□□ -0.82
KRR1-204ENST00000550898 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
KRR1-204ENST00000550898 NGLY1Q96IV0 654 aa9.92□□□□□ -0.82
KRR1-204ENST00000550898 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
KRR1-204ENST00000550898 TRPM3Q9HCF6 1732 aaPredicted RBP9.91□□□□□ -0.82
KRR1-204ENST00000550898 HDGFL2Q7Z4V5 671 aaPredicted RBP9.91□□□□□ -0.82
KRR1-204ENST00000550898 ABTB2Q8N961 1025 aa9.91□□□□□ -0.82
KRR1-204ENST00000550898 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
KRR1-204ENST00000550898 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
KRR1-204ENST00000550898 ILDR2Q71H61 639 aa9.9□□□□□ -0.82
KRR1-204ENST00000550898 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
KRR1-204ENST00000550898 TERF2IPQ9NYB0 399 aa9.9□□□□□ -0.82
KRR1-204ENST00000550898 USP21Q9UK80 565 aa9.9□□□□□ -0.82
KRR1-204ENST00000550898 CPSF1Q10570 1443 aaKnown RBP9.9□□□□□ -0.83
KRR1-204ENST00000550898 KTN1Q86UP2 1357 aaKnown RBP9.89□□□□□ -0.83
KRR1-204ENST00000550898 TTC21AQ8NDW8 1320 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 C3orf80F5H4A9 247 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 IFFO2Q5TF58 517 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 NLRP13Q86W25 1043 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 EPAS1Q99814 870 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 ALS2Q96Q42 1657 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 SSH2Q76I76 1423 aa9.89□□□□□ -0.83
KRR1-204ENST00000550898 USP19O94966 1318 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms