RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 GPR162Q16538 588 aa11.27□□□□□ -0.61
PFDN5-211ENST00000550846 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
PFDN5-211ENST00000550846 ZCRB1Q8TBF4 217 aaKnown RBP11.26□□□□□ -0.61
PFDN5-211ENST00000550846 FAM208AQ9UK61 1670 aaKnown RBP11.26□□□□□ -0.61
PFDN5-211ENST00000550846 NSD2O96028 1365 aa11.26□□□□□ -0.61
PFDN5-211ENST00000550846 ANKRD36BQ8N2N9 1353 aa11.26□□□□□ -0.61
PFDN5-211ENST00000550846 POLD1P28340 1107 aa11.25□□□□□ -0.61
PFDN5-211ENST00000550846 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
PFDN5-211ENST00000550846 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
PFDN5-211ENST00000550846 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
PFDN5-211ENST00000550846 NLGN2Q8NFZ4 835 aa11.25□□□□□ -0.61
PFDN5-211ENST00000550846 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
PFDN5-211ENST00000550846 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
PFDN5-211ENST00000550846 SHANK3Q9BYB0 1731 aa11.23□□□□□ -0.61
PFDN5-211ENST00000550846 TUBGCP6Q96RT7 1819 aa11.23□□□□□ -0.61
PFDN5-211ENST00000550846 RAPGEF4Q8WZA2 1011 aa11.23□□□□□ -0.61
PFDN5-211ENST00000550846 PUS7Q96PZ0 661 aaKnown RBP11.23□□□□□ -0.61
PFDN5-211ENST00000550846 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
PFDN5-211ENST00000550846 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
PFDN5-211ENST00000550846 FYB1O15117 783 aa11.22□□□□□ -0.61
PFDN5-211ENST00000550846 HSP90AB2PQ58FF8 381 aa11.22□□□□□ -0.61
PFDN5-211ENST00000550846 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
PFDN5-211ENST00000550846 USP47Q96K76 1375 aa11.22□□□□□ -0.61
PFDN5-211ENST00000550846 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
PFDN5-211ENST00000550846 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.61
PFDN5-211ENST00000550846 TATP17735 454 aaPredicted RBP11.21□□□□□ -0.61
PFDN5-211ENST00000550846 TMF1P82094 1093 aa11.21□□□□□ -0.61
PFDN5-211ENST00000550846 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
PFDN5-211ENST00000550846 SLC16A10Q8TF71 515 aa11.21□□□□□ -0.61
PFDN5-211ENST00000550846 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
PFDN5-211ENST00000550846 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
PFDN5-211ENST00000550846 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
PFDN5-211ENST00000550846 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
PFDN5-211ENST00000550846 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
PFDN5-211ENST00000550846 LY75O60449 1722 aa11.19□□□□□ -0.62
PFDN5-211ENST00000550846 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
PFDN5-211ENST00000550846 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 PHF14O94880 888 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
PFDN5-211ENST00000550846 FLT4P35916 1363 aa11.17□□□□□ -0.62
PFDN5-211ENST00000550846 CHD4Q14839 1912 aa11.17□□□□□ -0.62
PFDN5-211ENST00000550846 KIF20BQ96Q89 1820 aa11.17□□□□□ -0.62
PFDN5-211ENST00000550846 CYP27B1O15528 508 aa11.17□□□□□ -0.62
PFDN5-211ENST00000550846 INSRP06213 1382 aa11.16□□□□□ -0.62
PFDN5-211ENST00000550846 CGNL1Q0VF96 1302 aa11.16□□□□□ -0.62
PFDN5-211ENST00000550846 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
PFDN5-211ENST00000550846 AMIGO3Q86WK7 504 aa11.16□□□□□ -0.62
PFDN5-211ENST00000550846 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
PFDN5-211ENST00000550846 C5P01031 1676 aa11.16□□□□□ -0.62
PFDN5-211ENST00000550846 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.62
PFDN5-211ENST00000550846 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
PFDN5-211ENST00000550846 AK7Q96M32 723 aa11.15□□□□□ -0.62
PFDN5-211ENST00000550846 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
PFDN5-211ENST00000550846 COL24A1Q17RW2 1714 aa11.14□□□□□ -0.63
PFDN5-211ENST00000550846 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
PFDN5-211ENST00000550846 PIGBQ92521 554 aa11.13□□□□□ -0.63
PFDN5-211ENST00000550846 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
PFDN5-211ENST00000550846 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
PFDN5-211ENST00000550846 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
PFDN5-211ENST00000550846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
PFDN5-211ENST00000550846 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
PFDN5-211ENST00000550846 LINC00116Q8NCU8 138 aa11.11□□□□□ -0.63
PFDN5-211ENST00000550846 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
PFDN5-211ENST00000550846 ASAP1Q9ULH1 1129 aa11.11□□□□□ -0.63
PFDN5-211ENST00000550846 SPG7Q9UQ90 795 aa11.11□□□□□ -0.63
PFDN5-211ENST00000550846 PKD1L3Q7Z443 1732 aa11.1□□□□□ -0.63
PFDN5-211ENST00000550846 TAF1LQ8IZX4 1826 aa11.1□□□□□ -0.63
PFDN5-211ENST00000550846 FLAD1Q8NFF5 587 aa11.1□□□□□ -0.63
PFDN5-211ENST00000550846 EYA1Q99502 592 aa11.1□□□□□ -0.63
PFDN5-211ENST00000550846 TMOD3Q9NYL9 352 aa11.1□□□□□ -0.63
PFDN5-211ENST00000550846 KIF24Q5T7B8 1368 aa11.1□□□□□ -0.63
PFDN5-211ENST00000550846 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 ITGB4P16144 1822 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 LOC102724428A0A0B4J2F2 783 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 GNPATO15228 680 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 SIK1P57059 783 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
PFDN5-211ENST00000550846 ITPK1Q13572 414 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 CD2APQ9Y5K6 639 aa11.09□□□□□ -0.63
PFDN5-211ENST00000550846 PHKG2P15735 406 aa11.08□□□□□ -0.64
PFDN5-211ENST00000550846 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
PFDN5-211ENST00000550846 PCGF6Q9BYE7 350 aa11.08□□□□□ -0.64
PFDN5-211ENST00000550846 POLKQ9UBT6 870 aa11.08□□□□□ -0.64
PFDN5-211ENST00000550846 WASHC2AQ641Q2 1341 aa11.08□□□□□ -0.64
PFDN5-211ENST00000550846 EIF4A2Q14240 407 aaKnown RBP11.07□□□□□ -0.64
PFDN5-211ENST00000550846 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
PFDN5-211ENST00000550846 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
PFDN5-211ENST00000550846 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
PFDN5-211ENST00000550846 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
PFDN5-211ENST00000550846 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
PFDN5-211ENST00000550846 SSFA2P28290 1259 aa11.06□□□□□ -0.64
PFDN5-211ENST00000550846 IFNL2Q8IZJ0 200 aa11.06□□□□□ -0.64
PFDN5-211ENST00000550846 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
PFDN5-211ENST00000550846 ATG3Q9NT62 314 aa11.06□□□□□ -0.64
PFDN5-211ENST00000550846 MMP10P09238 476 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms