RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 E9PCH4 1651 aa8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 ANKRD30BQ9BXX2 1392 aa8.87□□□□□ -0.99
DEPDC4-209ENST00000550587 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
DEPDC4-209ENST00000550587 SIN3AQ96ST3 1273 aa8.87□□□□□ -0.99
DEPDC4-209ENST00000550587 IQGAP3Q86VI3 1631 aa8.87□□□□□ -0.99
DEPDC4-209ENST00000550587 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.86□□□□□ -0.99
DEPDC4-209ENST00000550587 BRINP3Q76B58 766 aa8.86□□□□□ -0.99
DEPDC4-209ENST00000550587 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
DEPDC4-209ENST00000550587 DCCP43146 1447 aa8.86□□□□□ -0.99
DEPDC4-209ENST00000550587 ADAMTS13Q76LX8 1427 aa8.86□□□□□ -0.99
DEPDC4-209ENST00000550587 SRCAPQ6ZRS2 3230 aa8.86□□□□□ -0.99
DEPDC4-209ENST00000550587 NEUROD1Q13562 356 aa8.85□□□□□ -0.99
DEPDC4-209ENST00000550587 EYA1Q99502 592 aa8.85□□□□□ -0.99
DEPDC4-209ENST00000550587 COL16A1Q07092 1604 aaPredicted RBP8.84□□□□□ -0.99
DEPDC4-209ENST00000550587 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
DEPDC4-209ENST00000550587 PPP1R18Q6NYC8 613 aa8.83□□□□□ -1
DEPDC4-209ENST00000550587 NGLY1Q96IV0 654 aa8.83□□□□□ -1
DEPDC4-209ENST00000550587 SHPRHQ149N8 1683 aa8.83□□□□□ -1
DEPDC4-209ENST00000550587 AFF2P51816 1311 aa8.82□□□□□ -1
DEPDC4-209ENST00000550587 PTGDRQ13258 359 aa8.82□□□□□ -1
DEPDC4-209ENST00000550587 SLF2Q8IX21 1173 aa8.82□□□□□ -1
DEPDC4-209ENST00000550587 NKX2-3Q8TAU0 364 aa8.82□□□□□ -1
DEPDC4-209ENST00000550587 C8orf37Q96NL8 207 aa8.82□□□□□ -1
DEPDC4-209ENST00000550587 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
DEPDC4-209ENST00000550587 PTPRUQ92729 1446 aa8.81□□□□□ -1
DEPDC4-209ENST00000550587 SPHKAPQ2M3C7 1700 aa8.81□□□□□ -1
DEPDC4-209ENST00000550587 COPS2P61201 443 aa8.81□□□□□ -1
DEPDC4-209ENST00000550587 RBM6P78332 1123 aaKnown RBP8.81□□□□□ -1
DEPDC4-209ENST00000550587 Q6ZNB5 142 aa8.81□□□□□ -1
DEPDC4-209ENST00000550587 SETBP1Q9Y6X0 1596 aa8.81□□□□□ -1
DEPDC4-209ENST00000550587 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 ASXL1Q8IXJ9 1541 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 LRP6O75581 1613 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 METP08581 1390 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 TONSLQ96HA7 1378 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 KIF1BO60333 1816 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 SETD1AO15047 1707 aaKnown RBP8.8□□□□□ -1
DEPDC4-209ENST00000550587 MST1RQ04912 1400 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 ADGRL3Q9HAR2 1447 aa8.8□□□□□ -1
DEPDC4-209ENST00000550587 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
DEPDC4-209ENST00000550587 NUTM2FA1L443 756 aa8.79□□□□□ -1
DEPDC4-209ENST00000550587 ADAMTS2O95450 1211 aa8.79□□□□□ -1
DEPDC4-209ENST00000550587 FAM161AQ3B820 660 aa8.79□□□□□ -1
DEPDC4-209ENST00000550587 NECTIN2Q92692 538 aa8.78□□□□□ -1
DEPDC4-209ENST00000550587 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
DEPDC4-209ENST00000550587 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1
DEPDC4-209ENST00000550587 SEMA3EO15041 775 aa8.77□□□□□ -1.01
DEPDC4-209ENST00000550587 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-209ENST00000550587 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
DEPDC4-209ENST00000550587 USP21Q9UK80 565 aa8.77□□□□□ -1.01
DEPDC4-209ENST00000550587 TRPC5Q9UL62 973 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-209ENST00000550587 NHSL1Q5SYE7 1610 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 PNPLA6Q8IY17 1366 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 GFRA3O60609 400 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 ESCO1Q5FWF5 840 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 ADGRG1Q9Y653 693 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 CCDC144AA2RUR9 1427 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 NPHP3Q7Z494 1330 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 C1orf167Q5SNV9 1468 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
DEPDC4-209ENST00000550587 NEXMIFQ5QGS0 1516 aa8.75□□□□□ -1.01
DEPDC4-209ENST00000550587 DNAJB2P25686 324 aa8.75□□□□□ -1.01
DEPDC4-209ENST00000550587 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
DEPDC4-209ENST00000550587 RBM46Q8TBY0 533 aaKnown RBP8.75□□□□□ -1.01
DEPDC4-209ENST00000550587 ORAI2Q96SN7 254 aa8.75□□□□□ -1.01
DEPDC4-209ENST00000550587 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
DEPDC4-209ENST00000550587 PTCH1Q13635 1447 aa8.74□□□□□ -1.01
DEPDC4-209ENST00000550587 CLTCL1P53675 1640 aa8.74□□□□□ -1.01
DEPDC4-209ENST00000550587 TMEM134Q9H6X4 195 aa8.74□□□□□ -1.01
DEPDC4-209ENST00000550587 SOS2Q07890 1332 aaPredicted RBP8.74□□□□□ -1.01
DEPDC4-209ENST00000550587 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 LCE2BO14633 110 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 ZPR1O75312 459 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 HAP1P54257 671 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 CCDC125Q86Z20 511 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 PCDHB3Q9Y5E6 796 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 NALCNQ8IZF0 1738 aa8.73□□□□□ -1.01
DEPDC4-209ENST00000550587 FOXO3O43524 673 aa8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 FNBP4Q8N3X1 1017 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 STK26Q9P289 416 aa8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 ROBO2Q9HCK4 1378 aa8.72□□□□□ -1.01
DEPDC4-209ENST00000550587 FCHSD2O94868 740 aa8.71□□□□□ -1.02
DEPDC4-209ENST00000550587 PSME1Q06323 249 aa8.71□□□□□ -1.02
DEPDC4-209ENST00000550587 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
DEPDC4-209ENST00000550587 RGS12O14924 1447 aa8.71□□□□□ -1.02
DEPDC4-209ENST00000550587 SPATA31E1Q6ZUB1 1445 aa8.71□□□□□ -1.02
DEPDC4-209ENST00000550587 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-209ENST00000550587 DCAF11Q8TEB1 546 aa8.7□□□□□ -1.02
DEPDC4-209ENST00000550587 TLL1O43897 1013 aa8.69□□□□□ -1.02
DEPDC4-209ENST00000550587 GGCXP38435 758 aa8.69□□□□□ -1.02
DEPDC4-209ENST00000550587 NBPF8Q3BBV2 869 aa8.69□□□□□ -1.02
DEPDC4-209ENST00000550587 GJD4Q96KN9 370 aaPredicted RBP8.69□□□□□ -1.02
DEPDC4-209ENST00000550587 LAMC1P11047 1609 aa8.69□□□□□ -1.02
DEPDC4-209ENST00000550587 CFHP08603 1231 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms