RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RALBP1Q15311 655 aa26.09■■□□□ 1.77
DDX54-207ENST00000550016 CFAP53Q96M91 514 aa26.08■■□□□ 1.77
DDX54-207ENST00000550016 COL3A1P02461 1466 aaPredicted RBP26.08■■□□□ 1.77
DDX54-207ENST00000550016 PKD1L3Q7Z443 1732 aa26.07■■□□□ 1.76
DDX54-207ENST00000550016 DDX54Q8TDD1 881 aaKnown RBP26.06■■□□□ 1.76
DDX54-207ENST00000550016 BCL9O00512 1426 aa26.05■■□□□ 1.76
DDX54-207ENST00000550016 SF3B2Q13435 895 aaKnown RBP26.04■■□□□ 1.76
DDX54-207ENST00000550016 TNS1Q9HBL0 1735 aaKnown RBP26.04■■□□□ 1.76
DDX54-207ENST00000550016 TRIM37O94972 964 aa26.03■■□□□ 1.76
DDX54-207ENST00000550016 SULT6B1Q6IMI4 303 aa26.03■■□□□ 1.76
DDX54-207ENST00000550016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.02■■□□□ 1.76
DDX54-207ENST00000550016 KDRP35968 1356 aa26.01■■□□□ 1.75
DDX54-207ENST00000550016 AEBP1Q8IUX7 1158 aa26.01■■□□□ 1.75
DDX54-207ENST00000550016 PLEKHG2Q9H7P9 1386 aa26.01■■□□□ 1.75
DDX54-207ENST00000550016 SPG7Q9UQ90 795 aa26.01■■□□□ 1.75
DDX54-207ENST00000550016 PCDH11XQ9BZA7 1347 aa25.99■■□□□ 1.75
DDX54-207ENST00000550016 PCDH11YQ9BZA8 1340 aa25.99■■□□□ 1.75
DDX54-207ENST00000550016 U2SURPO15042 1029 aaKnown RBP25.98■■□□□ 1.75
DDX54-207ENST00000550016 PRKRIP1Q9H875 184 aaPredicted RBP25.98■■□□□ 1.75
DDX54-207ENST00000550016 NUDCQ9Y266 331 aa25.98■■□□□ 1.75
DDX54-207ENST00000550016 MYBBP1AQ9BQG0 1328 aaKnown RBP25.97■■□□□ 1.75
DDX54-207ENST00000550016 NHSQ6T4R5 1651 aa25.96■■□□□ 1.75
DDX54-207ENST00000550016 HMOX1P09601 288 aa25.96■■□□□ 1.75
DDX54-207ENST00000550016 PLEKHO1Q53GL0 409 aaPredicted RBP25.96■■□□□ 1.75
DDX54-207ENST00000550016 BCL11BQ9C0K0 894 aaPredicted RBP25.96■■□□□ 1.75
DDX54-207ENST00000550016 CYP27B1O15528 508 aa25.95■■□□□ 1.74
DDX54-207ENST00000550016 DOT1LQ8TEK3 1739 aa25.94■■□□□ 1.74
DDX54-207ENST00000550016 BAG6P46379 1132 aa25.94■■□□□ 1.74
DDX54-207ENST00000550016 AMOTQ4VCS5 1084 aa25.94■■□□□ 1.74
DDX54-207ENST00000550016 ACSBG1Q96GR2 724 aa25.94■■□□□ 1.74
DDX54-207ENST00000550016 APBA3O96018 575 aa25.93■■□□□ 1.74
DDX54-207ENST00000550016 DEFB132Q7Z7B7 95 aa25.93■■□□□ 1.74
DDX54-207ENST00000550016 BTAF1O14981 1849 aa25.91■■□□□ 1.74
DDX54-207ENST00000550016 KCNQ2O43526 872 aa25.91■■□□□ 1.74
DDX54-207ENST00000550016 PTF1AQ7RTS3 328 aa25.91■■□□□ 1.74
DDX54-207ENST00000550016 IFNL2Q8IZJ0 200 aa25.91■■□□□ 1.74
DDX54-207ENST00000550016 ITGB4P16144 1822 aa25.91■■□□□ 1.74
DDX54-207ENST00000550016 NKX1-1Q15270 411 aaPredicted RBP25.9■■□□□ 1.74
DDX54-207ENST00000550016 U2AF1L5P0DN76 240 aaPredicted RBP25.89■■□□□ 1.74
DDX54-207ENST00000550016 PHKG2P15735 406 aa25.89■■□□□ 1.74
DDX54-207ENST00000550016 U2AF1Q01081 240 aaKnown RBP eCLIP25.89■■□□□ 1.74
DDX54-207ENST00000550016 PRIM1P49642 420 aaKnown RBP25.88■■□□□ 1.73
DDX54-207ENST00000550016 EN1Q05925 392 aaPredicted RBP25.88■■□□□ 1.73
DDX54-207ENST00000550016 ZNF530Q6P9A1 599 aaPredicted RBP25.88■■□□□ 1.73
DDX54-207ENST00000550016 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
DDX54-207ENST00000550016 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
DDX54-207ENST00000550016 VIRMAQ69YN4 1812 aaKnown RBP25.86■■□□□ 1.73
DDX54-207ENST00000550016 TOGARAM1Q9Y4F4 1720 aa25.86■■□□□ 1.73
DDX54-207ENST00000550016 PLSCR1O15162 318 aa25.85■■□□□ 1.73
DDX54-207ENST00000550016 CAMKK2Q96RR4 588 aa25.85■■□□□ 1.73
DDX54-207ENST00000550016 RSPH6AQ9H0K4 717 aa25.85■■□□□ 1.73
DDX54-207ENST00000550016 FCHSD2O94868 740 aa25.84■■□□□ 1.73
DDX54-207ENST00000550016 HSP90AB1P08238 724 aaKnown RBP25.84■■□□□ 1.73
DDX54-207ENST00000550016 C1orf141Q5JVX7 400 aa25.84■■□□□ 1.73
DDX54-207ENST00000550016 SYTL4Q96C24 671 aaPredicted RBP25.84■■□□□ 1.73
DDX54-207ENST00000550016 ANP32CO43423 234 aa25.83■■□□□ 1.73
DDX54-207ENST00000550016 EZH2Q15910 746 aaKnown RBP25.83■■□□□ 1.73
DDX54-207ENST00000550016 SCN11AQ9UI33 1791 aa25.82■■□□□ 1.72
DDX54-207ENST00000550016 PRKAR2BP31323 418 aa25.82■■□□□ 1.72
DDX54-207ENST00000550016 RREB1Q92766 1687 aa25.81■■□□□ 1.72
DDX54-207ENST00000550016 MTHFSDQ2M296 383 aaKnown RBP25.81■■□□□ 1.72
DDX54-207ENST00000550016 AKAP4Q5JQC9 854 aa25.8■■□□□ 1.72
DDX54-207ENST00000550016 DCAF5Q96JK2 942 aa25.8■■□□□ 1.72
DDX54-207ENST00000550016 PHACTR3Q96KR7 559 aa25.78■■□□□ 1.72
DDX54-207ENST00000550016 ERVV-2B6SEH9 535 aa25.77■■□□□ 1.72
DDX54-207ENST00000550016 MPRIPQ6WCQ1 1025 aa25.77■■□□□ 1.72
DDX54-207ENST00000550016 GAS2L2Q8NHY3 880 aa25.77■■□□□ 1.72
DDX54-207ENST00000550016 PNNQ9H307 717 aaKnown RBP25.76■■□□□ 1.71
DDX54-207ENST00000550016 KDM6AO15550 1401 aaPredicted RBP25.76■■□□□ 1.71
DDX54-207ENST00000550016 NUP188Q5SRE5 1749 aa25.76■■□□□ 1.71
DDX54-207ENST00000550016 LY75O60449 1722 aa25.75■■□□□ 1.71
DDX54-207ENST00000550016 PIGBQ92521 554 aa25.74■■□□□ 1.71
DDX54-207ENST00000550016 TMOD3Q9NYL9 352 aa25.74■■□□□ 1.71
DDX54-207ENST00000550016 NEFMP07197 916 aa25.73■■□□□ 1.71
DDX54-207ENST00000550016 PROM2Q8N271 834 aa25.73■■□□□ 1.71
DDX54-207ENST00000550016 DLG5Q8TDM6 1919 aa25.73■■□□□ 1.71
DDX54-207ENST00000550016 ADAMTS7Q9UKP4 1686 aa25.72■■□□□ 1.71
DDX54-207ENST00000550016 WDR43Q15061 677 aaKnown RBP eCLIP25.72■■□□□ 1.71
DDX54-207ENST00000550016 TXNRD1Q16881 649 aa25.72■■□□□ 1.71
DDX54-207ENST00000550016 PLEKHF1Q96S99 279 aa25.72■■□□□ 1.71
DDX54-207ENST00000550016 GNAT3A8MTJ3 354 aa25.71■■□□□ 1.71
DDX54-207ENST00000550016 CABP4P57796 275 aa25.71■■□□□ 1.71
DDX54-207ENST00000550016 MAP3K5Q99683 1374 aa25.7■■□□□ 1.71
DDX54-207ENST00000550016 RNMTO43148 476 aaKnown RBP25.7■■□□□ 1.7
DDX54-207ENST00000550016 LGR6Q9HBX8 967 aa25.7■■□□□ 1.7
DDX54-207ENST00000550016 SMARCC1Q92922 1105 aaPredicted RBP25.69■■□□□ 1.7
DDX54-207ENST00000550016 CCDC184Q52MB2 194 aa25.67■■□□□ 1.7
DDX54-207ENST00000550016 NFATC2IPQ8NCF5 419 aa25.67■■□□□ 1.7
DDX54-207ENST00000550016 ADAMTS8Q9UP79 889 aa25.67■■□□□ 1.7
DDX54-207ENST00000550016 SLC27A3Q5K4L6 730 aa25.66■■□□□ 1.7
DDX54-207ENST00000550016 MAPK8IP3Q9UPT6 1336 aa25.65■■□□□ 1.7
DDX54-207ENST00000550016 NBPF14Q5TI25 921 aa25.65■■□□□ 1.7
DDX54-207ENST00000550016 ASAP1Q9ULH1 1129 aa25.65■■□□□ 1.7
DDX54-207ENST00000550016 PALLDQ8WX93 1383 aa25.65■■□□□ 1.7
DDX54-207ENST00000550016 IL17REQ8NFR9 667 aa25.64■■□□□ 1.7
DDX54-207ENST00000550016 SLC52A2Q9HAB3 445 aa25.64■■□□□ 1.7
DDX54-207ENST00000550016 MRC1P22897 1456 aa25.64■■□□□ 1.69
DDX54-207ENST00000550016 SIPA1L3O60292 1781 aaPredicted RBP25.64■■□□□ 1.69
DDX54-207ENST00000550016 TAF1LQ8IZX4 1826 aa25.63■■□□□ 1.69
DDX54-207ENST00000550016 MRS2Q9HD23 443 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms