RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 THSD7AQ9UPZ6 1657 aa17.12■□□□□ 0.33
PFDN5-207ENST00000549759 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
PFDN5-207ENST00000549759 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
PFDN5-207ENST00000549759 PLEKHG2Q9H7P9 1386 aa17.12■□□□□ 0.33
PFDN5-207ENST00000549759 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
PFDN5-207ENST00000549759 HMOX1P09601 288 aa17.11■□□□□ 0.33
PFDN5-207ENST00000549759 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
PFDN5-207ENST00000549759 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
PFDN5-207ENST00000549759 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
PFDN5-207ENST00000549759 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
PFDN5-207ENST00000549759 FCHSD2O94868 740 aa17.09■□□□□ 0.33
PFDN5-207ENST00000549759 TRIM37O94972 964 aa17.09■□□□□ 0.33
PFDN5-207ENST00000549759 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
PFDN5-207ENST00000549759 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
PFDN5-207ENST00000549759 KDRP35968 1356 aa17.09■□□□□ 0.33
PFDN5-207ENST00000549759 MEGF6O75095 1541 aa17.09■□□□□ 0.33
PFDN5-207ENST00000549759 BCL9O00512 1426 aa17.08■□□□□ 0.32
PFDN5-207ENST00000549759 NEFMP07197 916 aa17.08■□□□□ 0.32
PFDN5-207ENST00000549759 HSP90AB1P08238 724 aaKnown RBP17.07■□□□□ 0.32
PFDN5-207ENST00000549759 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
PFDN5-207ENST00000549759 CYP27B1O15528 508 aa17.06■□□□□ 0.32
PFDN5-207ENST00000549759 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
PFDN5-207ENST00000549759 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
PFDN5-207ENST00000549759 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
PFDN5-207ENST00000549759 BAG6P46379 1132 aa17.05■□□□□ 0.32
PFDN5-207ENST00000549759 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
PFDN5-207ENST00000549759 EP400Q96L91 3159 aa17.05■□□□□ 0.32
PFDN5-207ENST00000549759 APBA3O96018 575 aa17.04■□□□□ 0.32
PFDN5-207ENST00000549759 PHKG2P15735 406 aa17.04■□□□□ 0.32
PFDN5-207ENST00000549759 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
PFDN5-207ENST00000549759 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
PFDN5-207ENST00000549759 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
PFDN5-207ENST00000549759 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
PFDN5-207ENST00000549759 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
PFDN5-207ENST00000549759 ACSBG1Q96GR2 724 aa17.03■□□□□ 0.32
PFDN5-207ENST00000549759 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
PFDN5-207ENST00000549759 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
PFDN5-207ENST00000549759 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
PFDN5-207ENST00000549759 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
PFDN5-207ENST00000549759 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
PFDN5-207ENST00000549759 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
PFDN5-207ENST00000549759 KCNQ2O43526 872 aa17■□□□□ 0.31
PFDN5-207ENST00000549759 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
PFDN5-207ENST00000549759 PLSCR1O15162 318 aa16.99■□□□□ 0.31
PFDN5-207ENST00000549759 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
PFDN5-207ENST00000549759 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
PFDN5-207ENST00000549759 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
PFDN5-207ENST00000549759 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
PFDN5-207ENST00000549759 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
PFDN5-207ENST00000549759 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
PFDN5-207ENST00000549759 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
PFDN5-207ENST00000549759 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
PFDN5-207ENST00000549759 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
PFDN5-207ENST00000549759 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
PFDN5-207ENST00000549759 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
PFDN5-207ENST00000549759 CABP4P57796 275 aa16.96■□□□□ 0.31
PFDN5-207ENST00000549759 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
PFDN5-207ENST00000549759 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
PFDN5-207ENST00000549759 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.3
PFDN5-207ENST00000549759 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
PFDN5-207ENST00000549759 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
PFDN5-207ENST00000549759 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
PFDN5-207ENST00000549759 WNK3Q9BYP7 1800 aa16.94■□□□□ 0.3
PFDN5-207ENST00000549759 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
PFDN5-207ENST00000549759 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
PFDN5-207ENST00000549759 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
PFDN5-207ENST00000549759 PIGBQ92521 554 aa16.93■□□□□ 0.3
PFDN5-207ENST00000549759 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
PFDN5-207ENST00000549759 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
PFDN5-207ENST00000549759 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
PFDN5-207ENST00000549759 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
PFDN5-207ENST00000549759 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
PFDN5-207ENST00000549759 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
PFDN5-207ENST00000549759 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
PFDN5-207ENST00000549759 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
PFDN5-207ENST00000549759 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
PFDN5-207ENST00000549759 TEFQ10587 303 aa16.9■□□□□ 0.3
PFDN5-207ENST00000549759 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
PFDN5-207ENST00000549759 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
PFDN5-207ENST00000549759 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
PFDN5-207ENST00000549759 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
PFDN5-207ENST00000549759 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
PFDN5-207ENST00000549759 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
PFDN5-207ENST00000549759 PKD1L3Q7Z443 1732 aa16.88■□□□□ 0.29
PFDN5-207ENST00000549759 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
PFDN5-207ENST00000549759 RIPK4P57078 832 aa16.88■□□□□ 0.29
PFDN5-207ENST00000549759 LMOD3Q0VAK6 560 aa16.88■□□□□ 0.29
PFDN5-207ENST00000549759 TMPOP42166 694 aaKnown RBP16.87■□□□□ 0.29
PFDN5-207ENST00000549759 PROM2Q8N271 834 aa16.87■□□□□ 0.29
PFDN5-207ENST00000549759 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
PFDN5-207ENST00000549759 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
PFDN5-207ENST00000549759 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
PFDN5-207ENST00000549759 MCM10Q7L590 875 aa16.85■□□□□ 0.29
PFDN5-207ENST00000549759 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
PFDN5-207ENST00000549759 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
PFDN5-207ENST00000549759 PALLDQ8WX93 1383 aa16.85■□□□□ 0.29
PFDN5-207ENST00000549759 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
PFDN5-207ENST00000549759 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
PFDN5-207ENST00000549759 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
PFDN5-207ENST00000549759 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms