RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
CNOT2-215ENST00000548863 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
CNOT2-215ENST00000548863 CDC14CA4D256 554 aa11.02□□□□□ -0.65
CNOT2-215ENST00000548863 NR1H3Q13133 447 aa11.02□□□□□ -0.65
CNOT2-215ENST00000548863 ZNF385CQ66K41 422 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-215ENST00000548863 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
CNOT2-215ENST00000548863 ADAMTS8Q9UP79 889 aa11.02□□□□□ -0.65
CNOT2-215ENST00000548863 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
CNOT2-215ENST00000548863 GPR37L1O60883 481 aa11□□□□□ -0.65
CNOT2-215ENST00000548863 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
CNOT2-215ENST00000548863 A0A1W2PRU2 124 aa10.98□□□□□ -0.65
CNOT2-215ENST00000548863 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
CNOT2-215ENST00000548863 ARHGEF15O94989 841 aa10.98□□□□□ -0.65
CNOT2-215ENST00000548863 PRICKLE2Q7Z3G6 844 aa10.98□□□□□ -0.65
CNOT2-215ENST00000548863 MTMR14Q8NCE2 650 aa10.98□□□□□ -0.65
CNOT2-215ENST00000548863 NDUFB9Q9Y6M9 179 aa10.98□□□□□ -0.65
CNOT2-215ENST00000548863 APBB1O00213 710 aa10.97□□□□□ -0.65
CNOT2-215ENST00000548863 SRSF11Q05519 484 aaKnown RBP10.97□□□□□ -0.65
CNOT2-215ENST00000548863 CUEDC1Q9NWM3 386 aaPredicted RBP10.97□□□□□ -0.65
CNOT2-215ENST00000548863 TRAK2O60296 914 aa10.96□□□□□ -0.65
CNOT2-215ENST00000548863 CLN3Q13286 438 aa10.96□□□□□ -0.65
CNOT2-215ENST00000548863 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.65
CNOT2-215ENST00000548863 SVOPQ8N4V2 548 aa10.96□□□□□ -0.65
CNOT2-215ENST00000548863 WDR44Q5JSH3 913 aa10.95□□□□□ -0.66
CNOT2-215ENST00000548863 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
CNOT2-215ENST00000548863 WHAMMQ8TF30 809 aa10.95□□□□□ -0.66
CNOT2-215ENST00000548863 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
CNOT2-215ENST00000548863 DYRK1BQ9Y463 629 aa10.95□□□□□ -0.66
CNOT2-215ENST00000548863 MEN1O00255 615 aa10.94□□□□□ -0.66
CNOT2-215ENST00000548863 ADAMTS2O95450 1211 aa10.94□□□□□ -0.66
CNOT2-215ENST00000548863 RASSF7Q02833 373 aa10.94□□□□□ -0.66
CNOT2-215ENST00000548863 GAS6Q14393 721 aa10.94□□□□□ -0.66
CNOT2-215ENST00000548863 RHOQP17081 205 aa10.93□□□□□ -0.66
CNOT2-215ENST00000548863 SCTRP47872 440 aa10.93□□□□□ -0.66
CNOT2-215ENST00000548863 TMEM151AQ8N4L1 468 aa10.93□□□□□ -0.66
CNOT2-215ENST00000548863 ZNF837Q96EG3 531 aaPredicted RBP10.93□□□□□ -0.66
CNOT2-215ENST00000548863 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
CNOT2-215ENST00000548863 SPATA31C2B4DYI2 1134 aa10.92□□□□□ -0.66
CNOT2-215ENST00000548863 NLRP3Q96P20 1036 aa10.92□□□□□ -0.66
CNOT2-215ENST00000548863 PCDHB11Q9Y5F2 797 aa10.92□□□□□ -0.66
CNOT2-215ENST00000548863 GDF11O95390 407 aa10.91□□□□□ -0.66
CNOT2-215ENST00000548863 SNRKQ9NRH2 765 aa10.91□□□□□ -0.66
CNOT2-215ENST00000548863 H7C1W4 665 aa10.9□□□□□ -0.66
CNOT2-215ENST00000548863 DBN1Q16643 649 aa10.9□□□□□ -0.66
CNOT2-215ENST00000548863 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
CNOT2-215ENST00000548863 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
CNOT2-215ENST00000548863 GNRH1P01148 92 aa10.89□□□□□ -0.67
CNOT2-215ENST00000548863 POU4F2Q12837 409 aa10.89□□□□□ -0.67
CNOT2-215ENST00000548863 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
CNOT2-215ENST00000548863 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
CNOT2-215ENST00000548863 MBIPQ9NS73 344 aa10.89□□□□□ -0.67
CNOT2-215ENST00000548863 CEP126Q9P2H0 1117 aa10.89□□□□□ -0.67
CNOT2-215ENST00000548863 LYPD4Q6UWN0 246 aa10.88□□□□□ -0.67
CNOT2-215ENST00000548863 KCTD17Q8N5Z5 321 aa10.87□□□□□ -0.67
CNOT2-215ENST00000548863 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
CNOT2-215ENST00000548863 ARHGEF10LQ9HCE6 1279 aa10.87□□□□□ -0.67
CNOT2-215ENST00000548863 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
CNOT2-215ENST00000548863 SCARF2Q96GP6 870 aaPredicted RBP10.86□□□□□ -0.67
CNOT2-215ENST00000548863 ESYT1Q9BSJ8 1104 aa10.86□□□□□ -0.67
CNOT2-215ENST00000548863 MAP3K10Q02779 954 aa10.85□□□□□ -0.67
CNOT2-215ENST00000548863 KANK3Q6NY19 840 aa10.85□□□□□ -0.67
CNOT2-215ENST00000548863 RIPOR1Q6ZS17 1223 aa10.85□□□□□ -0.67
CNOT2-215ENST00000548863 TAS1R3Q7RTX0 852 aa10.85□□□□□ -0.67
CNOT2-215ENST00000548863 HRH3Q9Y5N1 445 aa10.85□□□□□ -0.67
CNOT2-215ENST00000548863 MARSP56192 900 aaKnown RBP10.84□□□□□ -0.67
CNOT2-215ENST00000548863 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
CNOT2-215ENST00000548863 ENAMQ9NRM1 1142 aa10.84□□□□□ -0.67
CNOT2-215ENST00000548863 LRRC4BQ9NT99 713 aa10.84□□□□□ -0.67
CNOT2-215ENST00000548863 WASLO00401 505 aaPredicted RBP10.83□□□□□ -0.68
CNOT2-215ENST00000548863 F11P03951 625 aa10.83□□□□□ -0.68
CNOT2-215ENST00000548863 CCDC85AQ96PX6 553 aaPredicted RBP10.83□□□□□ -0.68
CNOT2-215ENST00000548863 GAS2L1Q99501 681 aaPredicted RBP10.83□□□□□ -0.68
CNOT2-215ENST00000548863 TIMMDC1Q9NPL8 285 aa10.83□□□□□ -0.68
CNOT2-215ENST00000548863 IGF1RP08069 1367 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 MYCP01106 439 aaPredicted RBP10.82□□□□□ -0.68
CNOT2-215ENST00000548863 IL2RAP01589 272 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 CENPCQ03188 943 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 PHTF2Q8N3S3 785 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 TRERF1Q96PN7 1200 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 PRM3Q9NNZ6 103 aa10.82□□□□□ -0.68
CNOT2-215ENST00000548863 DNMT3AQ9Y6K1 912 aaPredicted RBP10.82□□□□□ -0.68
CNOT2-215ENST00000548863 GPR25O00155 361 aa10.81□□□□□ -0.68
CNOT2-215ENST00000548863 IRS1P35568 1242 aa10.81□□□□□ -0.68
CNOT2-215ENST00000548863 GTPBP3Q969Y2 492 aaKnown RBP10.81□□□□□ -0.68
CNOT2-215ENST00000548863 CDCA7Q9BWT1 371 aaPredicted RBP10.81□□□□□ -0.68
CNOT2-215ENST00000548863 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
CNOT2-215ENST00000548863 CHIC2Q9UKJ5 165 aa10.8□□□□□ -0.68
CNOT2-215ENST00000548863 TBC1D2BQ9UPU7 963 aa10.8□□□□□ -0.68
CNOT2-215ENST00000548863 BCRP11274 1271 aa10.79□□□□□ -0.68
CNOT2-215ENST00000548863 RAB6BQ9NRW1 208 aa10.79□□□□□ -0.68
CNOT2-215ENST00000548863 USP4Q13107 963 aa10.78□□□□□ -0.68
CNOT2-215ENST00000548863 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
CNOT2-215ENST00000548863 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
CNOT2-215ENST00000548863 NUCKS1Q9H1E3 243 aaKnown RBP10.78□□□□□ -0.68
CNOT2-215ENST00000548863 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
CNOT2-215ENST00000548863 LOC100996750A0A140TA64 210 aa10.77□□□□□ -0.69
CNOT2-215ENST00000548863 A0A1B0GTH6 734 aa10.77□□□□□ -0.69
CNOT2-215ENST00000548863 IGHA1P01876 353 aa10.77□□□□□ -0.69
CNOT2-215ENST00000548863 FOXK2Q01167 660 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms