RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 RRP7AQ9Y3A4 280 aaKnown RBP21.52■■□□□ 1.04
HECTD4-206ENST00000548140 SALL2Q9Y467 1007 aaPredicted RBP21.52■■□□□ 1.04
HECTD4-206ENST00000548140 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
HECTD4-206ENST00000548140 ZNF772Q68DY9 489 aaPredicted RBP21.51■■□□□ 1.03
HECTD4-206ENST00000548140 ATRNO75882 1429 aa21.5■■□□□ 1.03
HECTD4-206ENST00000548140 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
HECTD4-206ENST00000548140 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
HECTD4-206ENST00000548140 AMOTQ4VCS5 1084 aa21.5■■□□□ 1.03
HECTD4-206ENST00000548140 GAS2L2Q8NHY3 880 aa21.49■■□□□ 1.03
HECTD4-206ENST00000548140 GJD4Q96KN9 370 aaPredicted RBP21.49■■□□□ 1.03
HECTD4-206ENST00000548140 BARGINQ6ZT62 677 aa21.48■■□□□ 1.03
HECTD4-206ENST00000548140 SPG7Q9UQ90 795 aa21.48■■□□□ 1.03
HECTD4-206ENST00000548140 OVOS2A0A0G2JMS6 1433 aa21.48■■□□□ 1.03
HECTD4-206ENST00000548140 RIPK4P57078 832 aa21.47■■□□□ 1.03
HECTD4-206ENST00000548140 FAM98CQ17RN3 349 aaKnown RBP21.47■■□□□ 1.03
HECTD4-206ENST00000548140 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
HECTD4-206ENST00000548140 PARP4Q9UKK3 1724 aaKnown RBP21.47■■□□□ 1.03
HECTD4-206ENST00000548140 PLEKHG2Q9H7P9 1386 aa21.47■■□□□ 1.03
HECTD4-206ENST00000548140 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
HECTD4-206ENST00000548140 ZNF530Q6P9A1 599 aaPredicted RBP21.46■■□□□ 1.03
HECTD4-206ENST00000548140 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
HECTD4-206ENST00000548140 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
HECTD4-206ENST00000548140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.46■■□□□ 1.03
HECTD4-206ENST00000548140 GLI3P10071 1580 aa21.44■■□□□ 1.02
HECTD4-206ENST00000548140 A0A0G2JS52 829 aa21.44■■□□□ 1.02
HECTD4-206ENST00000548140 EXOC5O00471 708 aa21.44■■□□□ 1.02
HECTD4-206ENST00000548140 MYT1Q01538 1121 aa21.44■■□□□ 1.02
HECTD4-206ENST00000548140 NGEFQ8N5V2 710 aa21.44■■□□□ 1.02
HECTD4-206ENST00000548140 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
HECTD4-206ENST00000548140 C1orf141Q5JVX7 400 aa21.43■■□□□ 1.02
HECTD4-206ENST00000548140 PKD1L3Q7Z443 1732 aa21.42■■□□□ 1.02
HECTD4-206ENST00000548140 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
HECTD4-206ENST00000548140 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 LMOD3Q0VAK6 560 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 DDB1Q16531 1140 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
HECTD4-206ENST00000548140 AKAP4Q5JQC9 854 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
HECTD4-206ENST00000548140 RGS17Q9UGC6 210 aaPredicted RBP21.41■■□□□ 1.02
HECTD4-206ENST00000548140 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 MAP3K5Q99683 1374 aa21.41■■□□□ 1.02
HECTD4-206ENST00000548140 CCDC27Q2M243 656 aa21.4■■□□□ 1.02
HECTD4-206ENST00000548140 RTF1Q92541 710 aaKnown RBP21.4■■□□□ 1.02
HECTD4-206ENST00000548140 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
HECTD4-206ENST00000548140 CYP27B1O15528 508 aa21.39■■□□□ 1.02
HECTD4-206ENST00000548140 PHKG2P15735 406 aa21.39■■□□□ 1.02
HECTD4-206ENST00000548140 RBM6P78332 1123 aaKnown RBP21.39■■□□□ 1.02
HECTD4-206ENST00000548140 WWC1Q8IX03 1113 aa21.39■■□□□ 1.02
HECTD4-206ENST00000548140 DLG5Q8TDM6 1919 aa21.39■■□□□ 1.01
HECTD4-206ENST00000548140 HTATSF1O43719 755 aaKnown RBP21.38■■□□□ 1.01
HECTD4-206ENST00000548140 DCTN1Q14203 1278 aa21.38■■□□□ 1.01
HECTD4-206ENST00000548140 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
HECTD4-206ENST00000548140 ONECUT3O60422 494 aaPredicted RBP21.38■■□□□ 1.01
HECTD4-206ENST00000548140 MPRIPQ6WCQ1 1025 aa21.37■■□□□ 1.01
HECTD4-206ENST00000548140 MCM10Q7L590 875 aa21.37■■□□□ 1.01
HECTD4-206ENST00000548140 RXRBP28702 533 aa21.36■■□□□ 1.01
HECTD4-206ENST00000548140 POTEAQ6S8J7 498 aa21.36■■□□□ 1.01
HECTD4-206ENST00000548140 SEPT12Q8IYM1 358 aa21.36■■□□□ 1.01
HECTD4-206ENST00000548140 THUMPD2Q9BTF0 503 aaKnown RBP21.36■■□□□ 1.01
HECTD4-206ENST00000548140 LRRC37A3O60309 1634 aa21.36■■□□□ 1.01
HECTD4-206ENST00000548140 THSD7AQ9UPZ6 1657 aa21.35■■□□□ 1.01
HECTD4-206ENST00000548140 HSP90AB1P08238 724 aaKnown RBP21.35■■□□□ 1.01
HECTD4-206ENST00000548140 SHANK3Q9BYB0 1731 aa21.35■■□□□ 1.01
HECTD4-206ENST00000548140 ZNF521Q96K83 1311 aa21.34■■□□□ 1.01
HECTD4-206ENST00000548140 RNMTO43148 476 aaKnown RBP21.34■■□□□ 1.01
HECTD4-206ENST00000548140 PDE3BQ13370 1112 aa21.34■■□□□ 1.01
HECTD4-206ENST00000548140 IL17REQ8NFR9 667 aa21.34■■□□□ 1.01
HECTD4-206ENST00000548140 LGR6Q9HBX8 967 aa21.34■■□□□ 1.01
HECTD4-206ENST00000548140 WDR63Q8IWG1 891 aa21.33■■□□□ 1.01
HECTD4-206ENST00000548140 DCAF5Q96JK2 942 aa21.32■■□□□ 1
HECTD4-206ENST00000548140 CALD1Q05682 793 aaKnown RBP21.31■■□□□ 1
HECTD4-206ENST00000548140 GOLGA2Q08379 1002 aa21.31■■□□□ 1
HECTD4-206ENST00000548140 NKX1-1Q15270 411 aaPredicted RBP21.31■■□□□ 1
HECTD4-206ENST00000548140 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
HECTD4-206ENST00000548140 KDM6AO15550 1401 aaPredicted RBP21.29■■□□□ 1
HECTD4-206ENST00000548140 CEMIPQ8WUJ3 1361 aa21.29■■□□□ 1
HECTD4-206ENST00000548140 TEFQ10587 303 aa21.29■■□□□ 1
HECTD4-206ENST00000548140 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
HECTD4-206ENST00000548140 CDCA7LQ96GN5 454 aa21.28■■□□□ 1
HECTD4-206ENST00000548140 IL16Q14005 1332 aa21.27■■□□□ 1
HECTD4-206ENST00000548140 CABP4P57796 275 aa21.26■□□□□ 0.99
HECTD4-206ENST00000548140 SPINK5Q9NQ38 1064 aaPredicted RBP21.26■□□□□ 0.99
HECTD4-206ENST00000548140 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 ERVV-2B6SEH9 535 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 E9PSI1 815 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 GNAI1P63096 354 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
HECTD4-206ENST00000548140 KRT27Q7Z3Y8 459 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 SLC52A2Q9HAB3 445 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 IFT57Q9NWB7 429 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 ADAMTS7Q9UKP4 1686 aa21.25■□□□□ 0.99
HECTD4-206ENST00000548140 SLFN5Q08AF3 891 aa21.24■□□□□ 0.99
HECTD4-206ENST00000548140 FAM182BQ5T319 152 aa21.24■□□□□ 0.99
HECTD4-206ENST00000548140 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
HECTD4-206ENST00000548140 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
HECTD4-206ENST00000548140 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
HECTD4-206ENST00000548140 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
HECTD4-206ENST00000548140 RGS12O14924 1447 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms