RNA–Protein interactions for RNA: ENST00000547566.5

HNRNPA1-205, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best)

Gene HNRNPA1, Length 1,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-205ENST00000547566 ZCRB1Q8TBF4 217 aaKnown RBP22.53■■□□□ 1.2
HNRNPA1-205ENST00000547566 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
HNRNPA1-205ENST00000547566 NBPF6Q5VWK0 638 aa22.52■■□□□ 1.2
HNRNPA1-205ENST00000547566 NBPF4Q96M43 638 aa22.52■■□□□ 1.2
HNRNPA1-205ENST00000547566 SLC27A3Q5K4L6 730 aa22.51■■□□□ 1.19
HNRNPA1-205ENST00000547566 COL24A1Q17RW2 1714 aa22.51■■□□□ 1.19
HNRNPA1-205ENST00000547566 CHD4Q14839 1912 aa22.51■■□□□ 1.19
HNRNPA1-205ENST00000547566 PRIM1P49642 420 aaKnown RBP22.5■■□□□ 1.19
HNRNPA1-205ENST00000547566 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
HNRNPA1-205ENST00000547566 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
HNRNPA1-205ENST00000547566 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
HNRNPA1-205ENST00000547566 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
HNRNPA1-205ENST00000547566 AKT1S1Q96B36 256 aa22.49■■□□□ 1.19
HNRNPA1-205ENST00000547566 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
HNRNPA1-205ENST00000547566 NSD2O96028 1365 aa22.49■■□□□ 1.19
HNRNPA1-205ENST00000547566 USHBP1Q8N6Y0 703 aa22.48■■□□□ 1.19
HNRNPA1-205ENST00000547566 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
HNRNPA1-205ENST00000547566 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
HNRNPA1-205ENST00000547566 INSRP06213 1382 aa22.47■■□□□ 1.19
HNRNPA1-205ENST00000547566 UTRNP46939 3433 aa22.47■■□□□ 1.19
HNRNPA1-205ENST00000547566 CARD14Q9BXL6 1004 aa22.46■■□□□ 1.19
HNRNPA1-205ENST00000547566 FLT4P35916 1363 aa22.46■■□□□ 1.19
HNRNPA1-205ENST00000547566 KIF24Q5T7B8 1368 aa22.46■■□□□ 1.19
HNRNPA1-205ENST00000547566 ANKRD26Q9UPS8 1709 aa22.45■■□□□ 1.19
HNRNPA1-205ENST00000547566 ITGB4P16144 1822 aa22.45■■□□□ 1.19
HNRNPA1-205ENST00000547566 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
HNRNPA1-205ENST00000547566 ARXQ96QS3 562 aa22.45■■□□□ 1.18
HNRNPA1-205ENST00000547566 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.18
HNRNPA1-205ENST00000547566 KCNQ4P56696 695 aa22.44■■□□□ 1.18
HNRNPA1-205ENST00000547566 TAF1LQ8IZX4 1826 aa22.43■■□□□ 1.18
HNRNPA1-205ENST00000547566 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
HNRNPA1-205ENST00000547566 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
HNRNPA1-205ENST00000547566 TATP17735 454 aaPredicted RBP22.43■■□□□ 1.18
HNRNPA1-205ENST00000547566 SLC16A10Q8TF71 515 aa22.43■■□□□ 1.18
HNRNPA1-205ENST00000547566 PKD1L3Q7Z443 1732 aa22.43■■□□□ 1.18
HNRNPA1-205ENST00000547566 MAP3K5Q99683 1374 aa22.42■■□□□ 1.18
HNRNPA1-205ENST00000547566 TOGARAM1Q9Y4F4 1720 aa22.4■■□□□ 1.18
HNRNPA1-205ENST00000547566 C5P01031 1676 aa22.4■■□□□ 1.18
HNRNPA1-205ENST00000547566 TFCP2L1Q9NZI6 479 aa22.4■■□□□ 1.18
HNRNPA1-205ENST00000547566 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
HNRNPA1-205ENST00000547566 PCDH11XQ9BZA7 1347 aa22.39■■□□□ 1.18
HNRNPA1-205ENST00000547566 PCDH11YQ9BZA8 1340 aa22.39■■□□□ 1.18
HNRNPA1-205ENST00000547566 CCNL1Q9UK58 526 aaPredicted RBP22.39■■□□□ 1.17
HNRNPA1-205ENST00000547566 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
HNRNPA1-205ENST00000547566 NCAPD2Q15021 1401 aa22.36■■□□□ 1.17
HNRNPA1-205ENST00000547566 CYP27B1O15528 508 aa22.35■■□□□ 1.17
HNRNPA1-205ENST00000547566 POLD1P28340 1107 aa22.35■■□□□ 1.17
HNRNPA1-205ENST00000547566 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
HNRNPA1-205ENST00000547566 PPM1GO15355 546 aaPredicted RBP22.33■■□□□ 1.17
HNRNPA1-205ENST00000547566 WASHC2AQ641Q2 1341 aa22.32■■□□□ 1.16
HNRNPA1-205ENST00000547566 MPRIPQ6WCQ1 1025 aa22.31■■□□□ 1.16
HNRNPA1-205ENST00000547566 COL23A1Q86Y22 540 aaPredicted RBP22.31■■□□□ 1.16
HNRNPA1-205ENST00000547566 PALLDQ8WX93 1383 aa22.3■■□□□ 1.16
HNRNPA1-205ENST00000547566 KLHL34Q8N239 644 aa22.3■■□□□ 1.16
HNRNPA1-205ENST00000547566 UBR3Q6ZT12 1888 aa22.3■■□□□ 1.16
HNRNPA1-205ENST00000547566 GOLGB1Q14789 3259 aaKnown RBP22.3■■□□□ 1.16
HNRNPA1-205ENST00000547566 POLKQ9UBT6 870 aa22.29■■□□□ 1.16
HNRNPA1-205ENST00000547566 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
HNRNPA1-205ENST00000547566 MSH5O43196 834 aa22.28■■□□□ 1.16
HNRNPA1-205ENST00000547566 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
HNRNPA1-205ENST00000547566 ZNF784Q8NCA9 323 aaPredicted RBP22.28■■□□□ 1.16
HNRNPA1-205ENST00000547566 EYA1Q99502 592 aa22.28■■□□□ 1.16
HNRNPA1-205ENST00000547566 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
HNRNPA1-205ENST00000547566 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
HNRNPA1-205ENST00000547566 HMGB2P26583 209 aaKnown RBP22.26■■□□□ 1.15
HNRNPA1-205ENST00000547566 GPR162Q16538 588 aa22.26■■□□□ 1.15
HNRNPA1-205ENST00000547566 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
HNRNPA1-205ENST00000547566 NLGN2Q8NFZ4 835 aa22.24■■□□□ 1.15
HNRNPA1-205ENST00000547566 PIGBQ92521 554 aa22.24■■□□□ 1.15
HNRNPA1-205ENST00000547566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.24■■□□□ 1.152e-10■□□□□ 10.2
HNRNPA1-205ENST00000547566 EIF4G2P78344 907 aaKnown RBP eCLIP22.23■■□□□ 1.15
HNRNPA1-205ENST00000547566 FLAD1Q8NFF5 587 aa22.23■■□□□ 1.15
HNRNPA1-205ENST00000547566 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
HNRNPA1-205ENST00000547566 TNNT2P45379 298 aaPredicted RBP22.22■■□□□ 1.15
HNRNPA1-205ENST00000547566 MSL1Q68DK7 614 aa22.22■■□□□ 1.15
HNRNPA1-205ENST00000547566 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
HNRNPA1-205ENST00000547566 IFNL2Q8IZJ0 200 aa22.2■■□□□ 1.14
HNRNPA1-205ENST00000547566 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.14
HNRNPA1-205ENST00000547566 PHKG2P15735 406 aa22.19■■□□□ 1.14
HNRNPA1-205ENST00000547566 PANK3Q9H999 370 aa22.19■■□□□ 1.14
HNRNPA1-205ENST00000547566 PLEKHG2Q9H7P9 1386 aa22.18■■□□□ 1.14
HNRNPA1-205ENST00000547566 AMIGO3Q86WK7 504 aa22.18■■□□□ 1.14
HNRNPA1-205ENST00000547566 AK7Q96M32 723 aa22.18■■□□□ 1.14
HNRNPA1-205ENST00000547566 TMOD3Q9NYL9 352 aa22.18■■□□□ 1.14
HNRNPA1-205ENST00000547566 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
HNRNPA1-205ENST00000547566 SIK1P57059 783 aa22.17■■□□□ 1.14
HNRNPA1-205ENST00000547566 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
HNRNPA1-205ENST00000547566 LINC00116Q8NCU8 138 aa22.15■■□□□ 1.14
HNRNPA1-205ENST00000547566 ASAP1Q9ULH1 1129 aa22.15■■□□□ 1.14
HNRNPA1-205ENST00000547566 YBX3P16989 372 aaKnown RBP eCLIP22.14■■□□□ 1.131e-27■□□□□ 8.3
HNRNPA1-205ENST00000547566 SMIM5Q71RC9 77 aa22.14■■□□□ 1.13
HNRNPA1-205ENST00000547566 CD2APQ9Y5K6 639 aa22.14■■□□□ 1.13
HNRNPA1-205ENST00000547566 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.13
HNRNPA1-205ENST00000547566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.13■■□□□ 1.13
HNRNPA1-205ENST00000547566 PHF14O94880 888 aa22.13■■□□□ 1.13
HNRNPA1-205ENST00000547566 SSFA2P28290 1259 aa22.13■■□□□ 1.13
HNRNPA1-205ENST00000547566 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
HNRNPA1-205ENST00000547566 ITPK1Q13572 414 aa22.12■■□□□ 1.13
HNRNPA1-205ENST00000547566 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
HNRNPA1-205ENST00000547566 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms