RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 BTAF1O14981 1849 aa21.72■■□□□ 1.07
DDX54-204ENST00000546898 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
DDX54-204ENST00000546898 PER1O15534 1290 aaPredicted RBP21.71■■□□□ 1.07
DDX54-204ENST00000546898 USHBP1Q8N6Y0 703 aa21.71■■□□□ 1.07
DDX54-204ENST00000546898 PLSCR1O15162 318 aa21.7■■□□□ 1.06
DDX54-204ENST00000546898 TATP17735 454 aaPredicted RBP21.7■■□□□ 1.06
DDX54-204ENST00000546898 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
DDX54-204ENST00000546898 NPC1L1Q9UHC9 1359 aa21.69■■□□□ 1.06
DDX54-204ENST00000546898 PLEKHG2Q9H7P9 1386 aa21.67■■□□□ 1.06
DDX54-204ENST00000546898 DDX54Q8TDD1 881 aaKnown RBP21.67■■□□□ 1.06
DDX54-204ENST00000546898 SRCAPQ6ZRS2 3230 aa21.67■■□□□ 1.06
DDX54-204ENST00000546898 EIF4A2Q14240 407 aaKnown RBP21.66■■□□□ 1.06
DDX54-204ENST00000546898 PTF1AQ7RTS3 328 aa21.66■■□□□ 1.06
DDX54-204ENST00000546898 PCDH11XQ9BZA7 1347 aa21.65■■□□□ 1.06
DDX54-204ENST00000546898 PCDH11YQ9BZA8 1340 aa21.65■■□□□ 1.06
DDX54-204ENST00000546898 ACSBG1Q96GR2 724 aa21.65■■□□□ 1.06
DDX54-204ENST00000546898 EYA1Q99502 592 aa21.65■■□□□ 1.06
DDX54-204ENST00000546898 KCNQ2O43526 872 aa21.63■■□□□ 1.05
DDX54-204ENST00000546898 LRP5O75197 1615 aa21.62■■□□□ 1.05
DDX54-204ENST00000546898 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
DDX54-204ENST00000546898 NBPF14Q5TI25 921 aa21.61■■□□□ 1.05
DDX54-204ENST00000546898 CC2D1BQ5T0F9 858 aaKnown RBP21.6■■□□□ 1.05
DDX54-204ENST00000546898 TOGARAM1Q9Y4F4 1720 aa21.6■■□□□ 1.05
DDX54-204ENST00000546898 PSDA5PKW4 1024 aaPredicted RBP21.59■■□□□ 1.05
DDX54-204ENST00000546898 LY75O60449 1722 aa21.59■■□□□ 1.05
DDX54-204ENST00000546898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.59■■□□□ 1.05
DDX54-204ENST00000546898 ITGB4P16144 1822 aa21.59■■□□□ 1.05
DDX54-204ENST00000546898 R3HDM1Q15032 1099 aaKnown RBP21.58■■□□□ 1.05
DDX54-204ENST00000546898 SPG7Q9UQ90 795 aa21.58■■□□□ 1.05
DDX54-204ENST00000546898 TXNRD1Q16881 649 aa21.57■■□□□ 1.04
DDX54-204ENST00000546898 PAPPAQ13219 1627 aa21.57■■□□□ 1.04
DDX54-204ENST00000546898 PROM2Q8N271 834 aa21.56■■□□□ 1.04
DDX54-204ENST00000546898 CYP27B1O15528 508 aa21.55■■□□□ 1.04
DDX54-204ENST00000546898 MTHFSP49914 203 aa21.55■■□□□ 1.04
DDX54-204ENST00000546898 KDRP35968 1356 aa21.54■■□□□ 1.04
DDX54-204ENST00000546898 PRIM1P49642 420 aaKnown RBP21.54■■□□□ 1.04
DDX54-204ENST00000546898 SYTL4Q96C24 671 aaPredicted RBP21.54■■□□□ 1.04
DDX54-204ENST00000546898 IL13P35225 146 aa21.53■■□□□ 1.04
DDX54-204ENST00000546898 CASZ1Q86V15 1759 aa21.52■■□□□ 1.04
DDX54-204ENST00000546898 NKX1-1Q15270 411 aaPredicted RBP21.51■■□□□ 1.03
DDX54-204ENST00000546898 COL3A1P02461 1466 aaPredicted RBP21.51■■□□□ 1.03
DDX54-204ENST00000546898 QSER1Q2KHR3 1735 aa21.5■■□□□ 1.03
DDX54-204ENST00000546898 IFNL2Q8IZJ0 200 aa21.5■■□□□ 1.03
DDX54-204ENST00000546898 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
DDX54-204ENST00000546898 PHKG2P15735 406 aa21.49■■□□□ 1.03
DDX54-204ENST00000546898 SLC27A3Q5K4L6 730 aa21.49■■□□□ 1.03
DDX54-204ENST00000546898 AMOTQ4VCS5 1084 aa21.48■■□□□ 1.03
DDX54-204ENST00000546898 PLEKHO1Q53GL0 409 aaPredicted RBP21.48■■□□□ 1.03
DDX54-204ENST00000546898 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
DDX54-204ENST00000546898 DIAPH1O60610 1272 aaKnown RBP21.47■■□□□ 1.03
DDX54-204ENST00000546898 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
DDX54-204ENST00000546898 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
DDX54-204ENST00000546898 AEBP1Q8IUX7 1158 aa21.47■■□□□ 1.03
DDX54-204ENST00000546898 TAF1LQ8IZX4 1826 aa21.45■■□□□ 1.03
DDX54-204ENST00000546898 C5P01031 1676 aa21.45■■□□□ 1.02
DDX54-204ENST00000546898 SLC15A2Q16348 729 aa21.45■■□□□ 1.02
DDX54-204ENST00000546898 VIRMAQ69YN4 1812 aaKnown RBP21.45■■□□□ 1.02
DDX54-204ENST00000546898 TUBGCP6Q96RT7 1819 aa21.44■■□□□ 1.02
DDX54-204ENST00000546898 HSP90AB1P08238 724 aaKnown RBP21.44■■□□□ 1.02
DDX54-204ENST00000546898 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
DDX54-204ENST00000546898 MPRIPQ6WCQ1 1025 aa21.44■■□□□ 1.02
DDX54-204ENST00000546898 LRRC4BQ9NT99 713 aa21.44■■□□□ 1.02
DDX54-204ENST00000546898 SCN11AQ9UI33 1791 aa21.43■■□□□ 1.02
DDX54-204ENST00000546898 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
DDX54-204ENST00000546898 PALLDQ8WX93 1383 aa21.42■■□□□ 1.02
DDX54-204ENST00000546898 CFAP53Q96M91 514 aa21.42■■□□□ 1.02
DDX54-204ENST00000546898 HMGB2P26583 209 aaKnown RBP21.41■■□□□ 1.02
DDX54-204ENST00000546898 SMARCC1Q92922 1105 aaPredicted RBP21.41■■□□□ 1.02
DDX54-204ENST00000546898 DCAF5Q96JK2 942 aa21.41■■□□□ 1.02
DDX54-204ENST00000546898 TMOD3Q9NYL9 352 aa21.41■■□□□ 1.02
DDX54-204ENST00000546898 CCNL1Q9UK58 526 aaPredicted RBP21.41■■□□□ 1.02
DDX54-204ENST00000546898 PPP2R1AP30153 589 aa21.4■■□□□ 1.02
DDX54-204ENST00000546898 C1orf141Q5JVX7 400 aa21.4■■□□□ 1.02
DDX54-204ENST00000546898 KDM6AO15550 1401 aaPredicted RBP21.39■■□□□ 1.02
DDX54-204ENST00000546898 PIGBQ92521 554 aa21.39■■□□□ 1.01
DDX54-204ENST00000546898 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
DDX54-204ENST00000546898 HMOX1P09601 288 aa21.38■■□□□ 1.01
DDX54-204ENST00000546898 AKT1S1Q96B36 256 aa21.38■■□□□ 1.01
DDX54-204ENST00000546898 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
DDX54-204ENST00000546898 ZNF827Q17R98 1081 aa21.37■■□□□ 1.01
DDX54-204ENST00000546898 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
DDX54-204ENST00000546898 ADAMTS7Q9UKP4 1686 aa21.37■■□□□ 1.01
DDX54-204ENST00000546898 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
DDX54-204ENST00000546898 C4BP0C0L5 1744 aa21.35■■□□□ 1.01
DDX54-204ENST00000546898 AKAP4Q5JQC9 854 aa21.35■■□□□ 1.01
DDX54-204ENST00000546898 KCNQ4P56696 695 aa21.34■■□□□ 1.01
DDX54-204ENST00000546898 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
DDX54-204ENST00000546898 COL24A1Q17RW2 1714 aa21.33■■□□□ 1.01
DDX54-204ENST00000546898 MRC1P22897 1456 aa21.32■■□□□ 1
DDX54-204ENST00000546898 PDGFDQ9GZP0 370 aaPredicted RBP21.32■■□□□ 1
DDX54-204ENST00000546898 UBR3Q6ZT12 1888 aa21.31■■□□□ 1
DDX54-204ENST00000546898 CABP4P57796 275 aa21.31■■□□□ 1
DDX54-204ENST00000546898 MTFR1LQ9H019 292 aa21.31■■□□□ 1
DDX54-204ENST00000546898 TFCP2L1Q9NZI6 479 aa21.31■■□□□ 1
DDX54-204ENST00000546898 PNPLA7Q6ZV29 1317 aa21.3■■□□□ 1
DDX54-204ENST00000546898 CICQ96RK0 1608 aaPredicted RBP21.3■■□□□ 1
DDX54-204ENST00000546898 COL5A3P25940 1745 aaPredicted RBP21.3■■□□□ 1
DDX54-204ENST00000546898 LOC102724428A0A0B4J2F2 783 aa21.3■■□□□ 1
DDX54-204ENST00000546898 SIK1P57059 783 aa21.3■■□□□ 1
DDX54-204ENST00000546898 DDX10Q13206 875 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms