RNA–Protein interactions for RNA: ENST00000546876.1

RBM19-204, Transcript of RNA binding motif protein 19, human

TSL 3

Gene RBM19, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM19-204	ENST00000546876	PLEKHG2	Q9H7P9	1386 aa		13.73	□□□□□ -0.21
RBM19-204	ENST00000546876	RXRB	P28702	533 aa		13.73	□□□□□ -0.21
RBM19-204	ENST00000546876	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	3e-8	■□□□□ 8.6
RBM19-204	ENST00000546876	NRAP	Q86VF7	1730 aa		13.73	□□□□□ -0.21
RBM19-204	ENST00000546876	EXOC5	O00471	708 aa		13.72	□□□□□ -0.21
RBM19-204	ENST00000546876	DDB1	Q16531	1140 aa		13.72	□□□□□ -0.21
RBM19-204	ENST00000546876	C1orf141	Q5JVX7	400 aa		13.72	□□□□□ -0.21
RBM19-204	ENST00000546876	ZCRB1	Q8TBF4	217 aa	Known RBP	13.72	□□□□□ -0.21
RBM19-204	ENST00000546876	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	PCDH11X	Q9BZA7	1347 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	PCDH11Y	Q9BZA8	1340 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	LMOD3	Q0VAK6	560 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	PDE3B	Q13370	1112 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	PLEKHF1	Q96S99	279 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	OVOS2	A0A0G2JMS6	1433 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	RGPD5	Q99666	1765 aa		13.7	□□□□□ -0.22
RBM19-204	ENST00000546876	APAF1	O14727	1248 aa		13.69	□□□□□ -0.22
RBM19-204	ENST00000546876	NFE2L2	Q16236	605 aa		13.69	□□□□□ -0.22
RBM19-204	ENST00000546876	NGEF	Q8N5V2	710 aa		13.69	□□□□□ -0.22
RBM19-204	ENST00000546876	DDX54	Q8TDD1	881 aa	Known RBP	13.69	□□□□□ -0.22
RBM19-204	ENST00000546876	RTF1	Q92541	710 aa	Known RBP	13.69	□□□□□ -0.22
RBM19-204	ENST00000546876	MEGF6	O75095	1541 aa		13.69	□□□□□ -0.22
RBM19-204	ENST00000546876	RGPD1	P0DJD0	1748 aa		13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	DISP2	A7MBM2	1401 aa		13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	HSP90AB1	P08238	724 aa	Known RBP	13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	MTHFSD	Q2M296	383 aa	Known RBP	13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	SEPT12	Q8IYM1	358 aa		13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	IFNL2	Q8IZJ0	200 aa		13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	PHACTR3	Q96KR7	559 aa		13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	RGS17	Q9UGC6	210 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM19-204	ENST00000546876	ONECUT3	O60422	494 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM19-204	ENST00000546876	TMPO	P42166	694 aa	Known RBP	13.67	□□□□□ -0.22
RBM19-204	ENST00000546876	RIPK4	P57078	832 aa		13.67	□□□□□ -0.22
RBM19-204	ENST00000546876	NEUROD2	Q15784	382 aa		13.67	□□□□□ -0.22
RBM19-204	ENST00000546876	AKAP4	Q5JQC9	854 aa		13.67	□□□□□ -0.22
RBM19-204	ENST00000546876	POTEA	Q6S8J7	498 aa		13.67	□□□□□ -0.22
RBM19-204	ENST00000546876	TNS2	Q63HR2	1409 aa		13.66	□□□□□ -0.22
RBM19-204	ENST00000546876	GNAT3	A8MTJ3	354 aa		13.66	□□□□□ -0.22
RBM19-204	ENST00000546876	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
RBM19-204	ENST00000546876	RRP7A	Q9Y3A4	280 aa	Known RBP	13.66	□□□□□ -0.22
RBM19-204	ENST00000546876	HTATSF1	O43719	755 aa	Known RBP	13.65	□□□□□ -0.22
RBM19-204	ENST00000546876	PHKG2	P15735	406 aa		13.65	□□□□□ -0.22
RBM19-204	ENST00000546876	MAP3K5	Q99683	1374 aa		13.65	□□□□□ -0.22
RBM19-204	ENST00000546876	GLI3	P10071	1580 aa		13.64	□□□□□ -0.23
RBM19-204	ENST00000546876	CALD1	Q05682	793 aa	Known RBP	13.64	□□□□□ -0.23
RBM19-204	ENST00000546876	SALL2	Q9Y467	1007 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM19-204	ENST00000546876	NCBP3	Q53F19	620 aa	Known RBP	13.63	□□□□□ -0.23
RBM19-204	ENST00000546876	DCAF5	Q96JK2	942 aa		13.63	□□□□□ -0.23
RBM19-204	ENST00000546876	PARP4	Q9UKK3	1724 aa	Known RBP	13.63	□□□□□ -0.23
RBM19-204	ENST00000546876	RGPD2	P0DJD1	1756 aa		13.63	□□□□□ -0.23
RBM19-204	ENST00000546876	CYP27B1	O15528	508 aa		13.62	□□□□□ -0.23
RBM19-204	ENST00000546876	KRT27	Q7Z3Y8	459 aa		13.62	□□□□□ -0.23
RBM19-204	ENST00000546876	YTHDC1	Q96MU7	727 aa	Known RBP	13.62	□□□□□ -0.23
RBM19-204	ENST00000546876	TEF	Q10587	303 aa		13.61	□□□□□ -0.23
RBM19-204	ENST00000546876	CCDC27	Q2M243	656 aa		13.61	□□□□□ -0.23
RBM19-204	ENST00000546876	MPRIP	Q6WCQ1	1025 aa		13.61	□□□□□ -0.23
RBM19-204	ENST00000546876	SENP3-EIF4A1	A0A087X0R7	540 aa		13.6	□□□□□ -0.23
RBM19-204	ENST00000546876	CABP4	P57796	275 aa		13.6	□□□□□ -0.23
RBM19-204	ENST00000546876	NKX1-1	Q15270	411 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM19-204	ENST00000546876	MARCH10	Q8NA82	808 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM19-204	ENST00000546876	ERVV-2	B6SEH9	535 aa		13.59	□□□□□ -0.23
RBM19-204	ENST00000546876	RNMT	O43148	476 aa	Known RBP	13.59	□□□□□ -0.23
RBM19-204	ENST00000546876	MCM10	Q7L590	875 aa		13.59	□□□□□ -0.23
RBM19-204	ENST00000546876	RGS12	O14924	1447 aa		13.58	□□□□□ -0.24
RBM19-204	ENST00000546876	FAM196A	Q6ZSG2	479 aa		13.58	□□□□□ -0.24
RBM19-204	ENST00000546876	WWC1	Q8IX03	1113 aa		13.58	□□□□□ -0.24
RBM19-204	ENST00000546876	SYTL4	Q96C24	671 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM19-204	ENST00000546876	TRIM35	Q9UPQ4	493 aa		13.58	□□□□□ -0.24
RBM19-204	ENST00000546876	THSD7A	Q9UPZ6	1657 aa		13.58	□□□□□ -0.24
RBM19-204	ENST00000546876	DCTN1	Q14203	1278 aa		13.57	□□□□□ -0.24
RBM19-204	ENST00000546876	WDR63	Q8IWG1	891 aa		13.57	□□□□□ -0.24
RBM19-204	ENST00000546876	IL17RE	Q8NFR9	667 aa		13.57	□□□□□ -0.24
RBM19-204	ENST00000546876	TMOD3	Q9NYL9	352 aa		13.57	□□□□□ -0.24
RBM19-204	ENST00000546876	LRRC37A3	O60309	1634 aa		13.57	□□□□□ -0.24
RBM19-204	ENST00000546876	PKD1L3	Q7Z443	1732 aa		13.56	□□□□□ -0.24
RBM19-204	ENST00000546876	THUMPD2	Q9BTF0	503 aa	Known RBP	13.56	□□□□□ -0.24
RBM19-204	ENST00000546876	LGR6	Q9HBX8	967 aa		13.56	□□□□□ -0.24
RBM19-204	ENST00000546876	LAS1L	Q9Y4W2	734 aa	Known RBP	13.56	□□□□□ -0.24
RBM19-204	ENST00000546876	ZBED9	Q6R2W3	1325 aa		13.56	□□□□□ -0.24
RBM19-204	ENST00000546876	PRIM1	P49642	420 aa	Known RBP	13.55	□□□□□ -0.24
RBM19-204	ENST00000546876	GOLGA2	Q08379	1002 aa		13.55	□□□□□ -0.24
RBM19-204	ENST00000546876	TAF7	Q15545	349 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM19-204	ENST00000546876	SLC52A2	Q9HAB3	445 aa		13.55	□□□□□ -0.24
RBM19-204	ENST00000546876	IL16	Q14005	1332 aa		13.55	□□□□□ -0.24
RBM19-204	ENST00000546876	GNAI1	P63096	354 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	FAM182B	Q5T319	152 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	NFATC2IP	Q8NCF5	419 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	ACSBG1	Q96GR2	724 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	MYH16	Q9H6N6	1097 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	WNK3	Q9BYP7	1800 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	CEMIP	Q8WUJ3	1361 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	BCL9	O00512	1426 aa		13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	KDM6A	O15550	1401 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM19-204	ENST00000546876	BTBD11	A6QL63	1104 aa		13.53	□□□□□ -0.24
RBM19-204	ENST00000546876	TTC5	Q8N0Z6	440 aa		13.53	□□□□□ -0.24
RBM19-204	ENST00000546876	IFT57	Q9NWB7	429 aa		13.53	□□□□□ -0.24
RBM19-204	ENST00000546876	BABAM1	Q9NWV8	329 aa		13.53	□□□□□ -0.24
RBM19-204	ENST00000546876	TSPYL4	Q9UJ04	414 aa		13.53	□□□□□ -0.24
RBM19-204	ENST00000546876		E9PSI1	815 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms