RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 SSH1Q8WYL5 1049 aa20.23■□□□□ 0.83
CACNA2D4-217ENST00000545595 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
CACNA2D4-217ENST00000545595 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
CACNA2D4-217ENST00000545595 LRRC59Q96AG4 307 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-217ENST00000545595 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
CACNA2D4-217ENST00000545595 AXIN2Q9Y2T1 843 aa20.22■□□□□ 0.83
CACNA2D4-217ENST00000545595 ZC3H6P61129 1189 aaKnown RBP20.21■□□□□ 0.83
CACNA2D4-217ENST00000545595 CABLES1Q8TDN4 633 aa20.21■□□□□ 0.83
CACNA2D4-217ENST00000545595 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
CACNA2D4-217ENST00000545595 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
CACNA2D4-217ENST00000545595 CHL1O00533 1208 aa20.2■□□□□ 0.82
CACNA2D4-217ENST00000545595 HTATSF1O43719 755 aaKnown RBP20.2■□□□□ 0.82
CACNA2D4-217ENST00000545595 ALDH1L2Q3SY69 923 aa20.2■□□□□ 0.82
CACNA2D4-217ENST00000545595 ERBB3P21860 1342 aa20.2■□□□□ 0.82
CACNA2D4-217ENST00000545595 TOM1O60784 492 aa20.2■□□□□ 0.82
CACNA2D4-217ENST00000545595 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
CACNA2D4-217ENST00000545595 VIRMAQ69YN4 1812 aaKnown RBP20.19■□□□□ 0.82
CACNA2D4-217ENST00000545595 VAMP4O75379 141 aa20.19■□□□□ 0.82
CACNA2D4-217ENST00000545595 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
CACNA2D4-217ENST00000545595 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
CACNA2D4-217ENST00000545595 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
CACNA2D4-217ENST00000545595 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
CACNA2D4-217ENST00000545595 RLBP1P12271 317 aa20.18■□□□□ 0.82
CACNA2D4-217ENST00000545595 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
CACNA2D4-217ENST00000545595 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
CACNA2D4-217ENST00000545595 COL22A1Q8NFW1 1626 aaPredicted RBP20.17■□□□□ 0.82
CACNA2D4-217ENST00000545595 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
CACNA2D4-217ENST00000545595 BRPF1P55201 1214 aaPredicted RBP20.16■□□□□ 0.82
CACNA2D4-217ENST00000545595 TWISTNBQ3B726 338 aaPredicted RBP20.16■□□□□ 0.82
CACNA2D4-217ENST00000545595 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
CACNA2D4-217ENST00000545595 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
CACNA2D4-217ENST00000545595 PLEKHG2Q9H7P9 1386 aa20.15■□□□□ 0.82
CACNA2D4-217ENST00000545595 TSHZ2Q9NRE2 1034 aa20.15■□□□□ 0.82
CACNA2D4-217ENST00000545595 MS4A1P11836 297 aa20.13■□□□□ 0.81
CACNA2D4-217ENST00000545595 TRIM27P14373 513 aa20.13■□□□□ 0.81
CACNA2D4-217ENST00000545595 ATF7IPQ6VMQ6 1270 aa20.13■□□□□ 0.81
CACNA2D4-217ENST00000545595 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
CACNA2D4-217ENST00000545595 NOB1Q9ULX3 412 aaKnown RBP20.13■□□□□ 0.81
CACNA2D4-217ENST00000545595 COL16A1Q07092 1604 aaPredicted RBP20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 CEMIPQ8WUJ3 1361 aa20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 KDM2BQ8NHM5 1336 aa20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 PHLPP1O60346 1717 aa20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
CACNA2D4-217ENST00000545595 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
CACNA2D4-217ENST00000545595 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
CACNA2D4-217ENST00000545595 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
CACNA2D4-217ENST00000545595 PRDM11Q9NQV5 511 aa20.11■□□□□ 0.81
CACNA2D4-217ENST00000545595 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
CACNA2D4-217ENST00000545595 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
CACNA2D4-217ENST00000545595 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
CACNA2D4-217ENST00000545595 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
CACNA2D4-217ENST00000545595 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
CACNA2D4-217ENST00000545595 IPO8O15397 1037 aaKnown RBP20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 AAMPQ13685 434 aa20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 KRT24Q2M2I5 525 aa20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 OVOS2A0A0G2JMS6 1433 aa20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 PKD1L3Q7Z443 1732 aa20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 ZNF530Q6P9A1 599 aaPredicted RBP20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 MIS18AQ9NYP9 233 aa20.09■□□□□ 0.81
CACNA2D4-217ENST00000545595 SIPA1L3O60292 1781 aaPredicted RBP20.08■□□□□ 0.81
CACNA2D4-217ENST00000545595 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.8
CACNA2D4-217ENST00000545595 BABAM1Q9NWV8 329 aa20.08■□□□□ 0.8
CACNA2D4-217ENST00000545595 MEGF6O75095 1541 aa20.07■□□□□ 0.8
CACNA2D4-217ENST00000545595 NLRP2Q9NX02 1062 aa20.07■□□□□ 0.8
CACNA2D4-217ENST00000545595 COL5A2P05997 1499 aaPredicted RBP20.07■□□□□ 0.8
CACNA2D4-217ENST00000545595 CENPQQ7L2Z9 268 aaPredicted RBP20.06■□□□□ 0.8
CACNA2D4-217ENST00000545595 ARHGAP45Q92619 1136 aa20.06■□□□□ 0.8
CACNA2D4-217ENST00000545595 WDR17Q8IZU2 1322 aa20.06■□□□□ 0.8
CACNA2D4-217ENST00000545595 UBAP1LF5GYI3 381 aa20.05■□□□□ 0.8
CACNA2D4-217ENST00000545595 SCN11AQ9UI33 1791 aa20.05■□□□□ 0.8
CACNA2D4-217ENST00000545595 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
CACNA2D4-217ENST00000545595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.05■□□□□ 0.85e-10■□□□□ 11.1
CACNA2D4-217ENST00000545595 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
CACNA2D4-217ENST00000545595 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
CACNA2D4-217ENST00000545595 CSB-PGBD3P0DP91 1061 aa20.04■□□□□ 0.8
CACNA2D4-217ENST00000545595 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
CACNA2D4-217ENST00000545595 COL14A1Q05707 1796 aaKnown RBP20.04■□□□□ 0.8
CACNA2D4-217ENST00000545595 TMEM57Q8N5G2 664 aa20.03■□□□□ 0.8
CACNA2D4-217ENST00000545595 LGR6Q9HBX8 967 aa20.03■□□□□ 0.8
CACNA2D4-217ENST00000545595 CACNA1FO60840 1977 aa20.03■□□□□ 0.8
CACNA2D4-217ENST00000545595 PIP4K2BP78356 416 aa20.02■□□□□ 0.8
CACNA2D4-217ENST00000545595 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
CACNA2D4-217ENST00000545595 RAPGEF4Q8WZA2 1011 aa20.02■□□□□ 0.8
CACNA2D4-217ENST00000545595 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
CACNA2D4-217ENST00000545595 ABCC4O15439 1325 aa20.02■□□□□ 0.8
CACNA2D4-217ENST00000545595 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.79
CACNA2D4-217ENST00000545595 RGS12O14924 1447 aa20.01■□□□□ 0.79
CACNA2D4-217ENST00000545595 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
CACNA2D4-217ENST00000545595 TATP17735 454 aaPredicted RBP20.01■□□□□ 0.79
CACNA2D4-217ENST00000545595 SOS1Q07889 1333 aaPredicted RBP20■□□□□ 0.79
CACNA2D4-217ENST00000545595 MPRIPQ6WCQ1 1025 aa19.99■□□□□ 0.79
CACNA2D4-217ENST00000545595 CARD10Q9BWT7 1032 aa19.99■□□□□ 0.79
CACNA2D4-217ENST00000545595 PCDHB15Q9Y5E8 787 aa19.99■□□□□ 0.79
CACNA2D4-217ENST00000545595 API5Q9BZZ5 524 aaKnown RBP19.98■□□□□ 0.79
CACNA2D4-217ENST00000545595 IGHDP01880 384 aa19.98■□□□□ 0.79
CACNA2D4-217ENST00000545595 KDM6AO15550 1401 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms