RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 ZKSCAN5Q9Y2L8 839 aa23.15■■□□□ 1.3
GRAMD2B-219ENST00000544396 CWC22Q9HCG8 908 aaKnown RBP23.15■■□□□ 1.3
GRAMD2B-219ENST00000544396 ST18O60284 1047 aa23.14■■□□□ 1.3
GRAMD2B-219ENST00000544396 LRSAM1Q6UWE0 723 aa23.14■■□□□ 1.29
GRAMD2B-219ENST00000544396 DMTNQ08495 405 aa23.13■■□□□ 1.29
GRAMD2B-219ENST00000544396 NEXMIFQ5QGS0 1516 aa23.12■■□□□ 1.29
GRAMD2B-219ENST00000544396 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
GRAMD2B-219ENST00000544396 KNDC1Q76NI1 1749 aa23.12■■□□□ 1.29
GRAMD2B-219ENST00000544396 MPNDQ8N594 471 aa23.12■■□□□ 1.29
GRAMD2B-219ENST00000544396 ANKRD44Q8N8A2 993 aa23.12■■□□□ 1.29
GRAMD2B-219ENST00000544396 GTF2E1P29083 439 aaPredicted RBP23.11■■□□□ 1.29
GRAMD2B-219ENST00000544396 CFAP44Q96MT7 982 aa23.11■■□□□ 1.29
GRAMD2B-219ENST00000544396 FOXD4L6Q3SYB3 417 aaPredicted RBP23.11■■□□□ 1.29
GRAMD2B-219ENST00000544396 FOXD4L3Q6VB84 417 aaPredicted RBP23.11■■□□□ 1.29
GRAMD2B-219ENST00000544396 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
GRAMD2B-219ENST00000544396 NOL8Q76FK4 1167 aaKnown RBP23.1■■□□□ 1.29
GRAMD2B-219ENST00000544396 IL13P35225 146 aa23.09■■□□□ 1.29
GRAMD2B-219ENST00000544396 ZSCAN20P17040 1043 aaPredicted RBP23.09■■□□□ 1.29
GRAMD2B-219ENST00000544396 PTPRMP28827 1452 aa23.08■■□□□ 1.29
GRAMD2B-219ENST00000544396 FRMPD1Q5SYB0 1578 aa23.08■■□□□ 1.29
GRAMD2B-219ENST00000544396 YTHDC2Q9H6S0 1430 aaKnown RBP23.08■■□□□ 1.29
GRAMD2B-219ENST00000544396 NEK4P51957 841 aa23.08■■□□□ 1.29
GRAMD2B-219ENST00000544396 ZFYVE9O95405 1425 aa23.08■■□□□ 1.29
GRAMD2B-219ENST00000544396 TSHZ3Q63HK5 1081 aa23.08■■□□□ 1.28
GRAMD2B-219ENST00000544396 MEIS3Q99687 375 aa23.08■■□□□ 1.28
GRAMD2B-219ENST00000544396 ABCC3O15438 1527 aa23.07■■□□□ 1.28
GRAMD2B-219ENST00000544396 CASC1Q6TDU7 716 aa23.07■■□□□ 1.28
GRAMD2B-219ENST00000544396 ATP10DQ9P241 1426 aa23.07■■□□□ 1.28
GRAMD2B-219ENST00000544396 JARID2Q92833 1246 aaPredicted RBP23.07■■□□□ 1.28
GRAMD2B-219ENST00000544396 TMX3Q96JJ7 454 aa23.07■■□□□ 1.28
GRAMD2B-219ENST00000544396 DYNC1I1O14576 645 aa23.06■■□□□ 1.28
GRAMD2B-219ENST00000544396 UTP14CQ5TAP6 766 aaKnown RBP23.06■■□□□ 1.28
GRAMD2B-219ENST00000544396 MTERF4Q7Z6M4 381 aaKnown RBP23.06■■□□□ 1.28
GRAMD2B-219ENST00000544396 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
GRAMD2B-219ENST00000544396 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
GRAMD2B-219ENST00000544396 ERC2O15083 957 aa23.05■■□□□ 1.28
GRAMD2B-219ENST00000544396 REC8O95072 547 aa23.05■■□□□ 1.28
GRAMD2B-219ENST00000544396 NME9Q86XW9 330 aa23.05■■□□□ 1.28
GRAMD2B-219ENST00000544396 CCDC39Q9UFE4 941 aa23.05■■□□□ 1.28
GRAMD2B-219ENST00000544396 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
GRAMD2B-219ENST00000544396 GDPD2Q9HCC8 539 aa23.04■■□□□ 1.28
GRAMD2B-219ENST00000544396 WAPLQ7Z5K2 1190 aa23.04■■□□□ 1.28
GRAMD2B-219ENST00000544396 CCDC94Q9BW85 323 aaPredicted RBP23.04■■□□□ 1.28
GRAMD2B-219ENST00000544396 REREQ9P2R6 1566 aa23.04■■□□□ 1.28
GRAMD2B-219ENST00000544396 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
GRAMD2B-219ENST00000544396 CDC42BPGQ6DT37 1551 aa23.03■■□□□ 1.28
GRAMD2B-219ENST00000544396 ANKRD26Q9UPS8 1709 aa23.03■■□□□ 1.28
GRAMD2B-219ENST00000544396 PTMAP06454 111 aaKnown RBP23.02■■□□□ 1.28
GRAMD2B-219ENST00000544396 TPRNQ4KMQ1 711 aa23.02■■□□□ 1.28
GRAMD2B-219ENST00000544396 MSH6P52701 1360 aa23.02■■□□□ 1.28
GRAMD2B-219ENST00000544396 CSPP1Q1MSJ5 1256 aa23.02■■□□□ 1.28
GRAMD2B-219ENST00000544396 PPP4R3BQ5MIZ7 849 aa23.02■■□□□ 1.28
GRAMD2B-219ENST00000544396 PALD1Q9ULE6 856 aa23.02■■□□□ 1.28
GRAMD2B-219ENST00000544396 RTL1A6NKG5 1358 aa23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 ZNF830Q96NB3 372 aaPredicted RBP23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 HECW2Q9P2P5 1572 aa23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 RAPGEF3O95398 923 aa23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 TSC1Q92574 1164 aa23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
GRAMD2B-219ENST00000544396 GADD45BO75293 160 aaPredicted RBP23■■□□□ 1.27
GRAMD2B-219ENST00000544396 MCM5P33992 734 aa23■■□□□ 1.27
GRAMD2B-219ENST00000544396 RGS12O14924 1447 aa23■■□□□ 1.27
GRAMD2B-219ENST00000544396 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
GRAMD2B-219ENST00000544396 BRD1O95696 1058 aa23■■□□□ 1.27
GRAMD2B-219ENST00000544396 SASS6Q6UVJ0 657 aa23■■□□□ 1.27
GRAMD2B-219ENST00000544396 NAP1L2Q9ULW6 460 aaPredicted RBP23■■□□□ 1.27
GRAMD2B-219ENST00000544396 TSPY26PQ9H489 355 aa23■■□□□ 1.27
GRAMD2B-219ENST00000544396 POGZQ7Z3K3 1410 aa22.99■■□□□ 1.27
GRAMD2B-219ENST00000544396 KIF24Q5T7B8 1368 aa22.99■■□□□ 1.27
GRAMD2B-219ENST00000544396 MBD3O95983 291 aa22.99■■□□□ 1.27
GRAMD2B-219ENST00000544396 CBX1P83916 185 aa22.99■■□□□ 1.27
GRAMD2B-219ENST00000544396 AEBP1Q8IUX7 1158 aa22.99■■□□□ 1.27
GRAMD2B-219ENST00000544396 PDIA4P13667 645 aaKnown RBP22.98■■□□□ 1.27
GRAMD2B-219ENST00000544396 PDE1AP54750 535 aa22.98■■□□□ 1.27
GRAMD2B-219ENST00000544396 LMOD3Q0VAK6 560 aa22.98■■□□□ 1.27
GRAMD2B-219ENST00000544396 MCM10Q7L590 875 aa22.98■■□□□ 1.27
GRAMD2B-219ENST00000544396 ARHGEF40Q8TER5 1519 aa22.97■■□□□ 1.27
GRAMD2B-219ENST00000544396 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
GRAMD2B-219ENST00000544396 NCKAP5LQ9HCH0 1330 aa22.96■■□□□ 1.27
GRAMD2B-219ENST00000544396 F6X3S4 739 aa22.96■■□□□ 1.27
GRAMD2B-219ENST00000544396 C17orf53Q8N3J3 647 aaPredicted RBP22.96■■□□□ 1.27
GRAMD2B-219ENST00000544396 EXOC6BQ9Y2D4 811 aa22.96■■□□□ 1.27
GRAMD2B-219ENST00000544396 SLC4A10Q6U841 1118 aa22.95■■□□□ 1.27
GRAMD2B-219ENST00000544396 UPF3BQ9BZI7 483 aaKnown RBP22.95■■□□□ 1.27
GRAMD2B-219ENST00000544396 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
GRAMD2B-219ENST00000544396 DNTTIP2Q5QJE6 756 aaKnown RBP22.95■■□□□ 1.26
GRAMD2B-219ENST00000544396 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.95■■□□□ 1.26
GRAMD2B-219ENST00000544396 KIAA2012Q0VF49 1180 aa22.94■■□□□ 1.26
GRAMD2B-219ENST00000544396 MAP2P11137 1827 aaKnown RBP22.94■■□□□ 1.26
GRAMD2B-219ENST00000544396 SLC4A2P04920 1241 aa22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 CUL4AQ13619 759 aa22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 FBXO31Q5XUX0 539 aaPredicted RBP22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 G2E3Q7L622 706 aa22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 ESYT1Q9BSJ8 1104 aa22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 ANO2Q9NQ90 1003 aa22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
GRAMD2B-219ENST00000544396 MLH3Q9UHC1 1453 aa22.92■■□□□ 1.26
GRAMD2B-219ENST00000544396 KIF20BQ96Q89 1820 aa22.92■■□□□ 1.26
GRAMD2B-219ENST00000544396 FAM177BA6PVY3 158 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms