RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ANTXR1Q9H6X2 564 aa22.24■■□□□ 1.15
SCARB1-208ENST00000544327 C1orf115Q9H7X2 142 aa22.22■■□□□ 1.15
SCARB1-208ENST00000544327 HTATSF1O43719 755 aaKnown RBP22.21■■□□□ 1.15
SCARB1-208ENST00000544327 KCNA6P17658 529 aa22.21■■□□□ 1.15
SCARB1-208ENST00000544327 MFAP1P55081 439 aaKnown RBP22.21■■□□□ 1.15
SCARB1-208ENST00000544327 ANKRD45Q5TZF3 282 aa22.21■■□□□ 1.15
SCARB1-208ENST00000544327 GAS2L2Q8NHY3 880 aa22.21■■□□□ 1.15
SCARB1-208ENST00000544327 NWD1Q149M9 1564 aa22.2■■□□□ 1.15
SCARB1-208ENST00000544327 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
SCARB1-208ENST00000544327 MTHFSDQ2M296 383 aaKnown RBP22.2■■□□□ 1.14
SCARB1-208ENST00000544327 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.14
SCARB1-208ENST00000544327 AMPHP49418 695 aa22.2■■□□□ 1.14
SCARB1-208ENST00000544327 RBM25P49756 843 aaKnown RBP22.2■■□□□ 1.14
SCARB1-208ENST00000544327 EYA1Q99502 592 aa22.2■■□□□ 1.14
SCARB1-208ENST00000544327 ATP10DQ9P241 1426 aa22.19■■□□□ 1.14
SCARB1-208ENST00000544327 FRAT2O75474 233 aaPredicted RBP22.19■■□□□ 1.14
SCARB1-208ENST00000544327 KRT24Q2M2I5 525 aa22.18■■□□□ 1.14
SCARB1-208ENST00000544327 DCTPP1Q9H773 170 aa22.18■■□□□ 1.14
SCARB1-208ENST00000544327 SOX12O15370 315 aa22.17■■□□□ 1.14
SCARB1-208ENST00000544327 GSE1Q14687 1217 aa22.17■■□□□ 1.14
SCARB1-208ENST00000544327 RTF1Q92541 710 aaKnown RBP22.17■■□□□ 1.14
SCARB1-208ENST00000544327 RTL1A6NKG5 1358 aa22.17■■□□□ 1.14
SCARB1-208ENST00000544327 ANKRD44Q8N8A2 993 aa22.17■■□□□ 1.14
SCARB1-208ENST00000544327 NLRP6P59044 892 aa22.16■■□□□ 1.14
SCARB1-208ENST00000544327 RPAP2Q8IXW5 612 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-208ENST00000544327 HOXC9P31274 260 aa22.15■■□□□ 1.14
SCARB1-208ENST00000544327 FOXO3O43524 673 aa22.14■■□□□ 1.13
SCARB1-208ENST00000544327 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
SCARB1-208ENST00000544327 TSPYL4Q9UJ04 414 aa22.14■■□□□ 1.13
SCARB1-208ENST00000544327 SOS1Q07889 1333 aaPredicted RBP22.14■■□□□ 1.13
SCARB1-208ENST00000544327 MSH6P52701 1360 aa22.13■■□□□ 1.13
SCARB1-208ENST00000544327 BABAM1Q9NWV8 329 aa22.13■■□□□ 1.13
SCARB1-208ENST00000544327 SNX21Q969T3 373 aa22.12■■□□□ 1.13
SCARB1-208ENST00000544327 FAM208AQ9UK61 1670 aaKnown RBP22.11■■□□□ 1.13
SCARB1-208ENST00000544327 EIF5BO60841 1220 aaKnown RBP22.11■■□□□ 1.13
SCARB1-208ENST00000544327 CEP85Q6P2H3 762 aa22.11■■□□□ 1.13
SCARB1-208ENST00000544327 SLKQ9H2G2 1235 aaPredicted RBP22.11■■□□□ 1.13
SCARB1-208ENST00000544327 NCOA3Q9Y6Q9 1424 aa22.1■■□□□ 1.13
SCARB1-208ENST00000544327 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
SCARB1-208ENST00000544327 LTN1O94822 1766 aa22.09■■□□□ 1.13
SCARB1-208ENST00000544327 N4BP2Q86UW6 1770 aaPredicted RBP22.09■■□□□ 1.13
SCARB1-208ENST00000544327 PLEKHM2Q8IWE5 1019 aa22.09■■□□□ 1.13
SCARB1-208ENST00000544327 PHRF1Q9P1Y6 1649 aaKnown RBP22.09■■□□□ 1.13
SCARB1-208ENST00000544327 CACNA1FO60840 1977 aa22.09■■□□□ 1.13
SCARB1-208ENST00000544327 NFAT5O94916 1531 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 MAP3K5Q99683 1374 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 GNAT3A8MTJ3 354 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 CCT4P50991 539 aaKnown RBP22.08■■□□□ 1.13
SCARB1-208ENST00000544327 TBC1D9Q6ZT07 1266 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 ANKLE2Q86XL3 938 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 ABTB2Q8N961 1025 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 PHF8Q9UPP1 1060 aa22.08■■□□□ 1.13
SCARB1-208ENST00000544327 HSCBQ8IWL3 235 aa22.08■■□□□ 1.12
SCARB1-208ENST00000544327 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.12
SCARB1-208ENST00000544327 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
SCARB1-208ENST00000544327 CDC45O75419 566 aa22.07■■□□□ 1.12
SCARB1-208ENST00000544327 MEIS3Q99687 375 aa22.06■■□□□ 1.12
SCARB1-208ENST00000544327 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
SCARB1-208ENST00000544327 GSPT1P15170 499 aaKnown RBP22.05■■□□□ 1.12
SCARB1-208ENST00000544327 CHMP5Q9NZZ3 219 aa22.05■■□□□ 1.12
SCARB1-208ENST00000544327 TTC22Q5TAA0 569 aa22.04■■□□□ 1.12
SCARB1-208ENST00000544327 G2E3Q7L622 706 aa22.03■■□□□ 1.12
SCARB1-208ENST00000544327 KIF2CQ99661 725 aa22.03■■□□□ 1.12
SCARB1-208ENST00000544327 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
SCARB1-208ENST00000544327 CCDC30Q5VVM6 783 aa22.03■■□□□ 1.12
SCARB1-208ENST00000544327 IP6K1Q92551 441 aa22.03■■□□□ 1.12
SCARB1-208ENST00000544327 STK31Q9BXU1 1019 aa22.03■■□□□ 1.12
SCARB1-208ENST00000544327 PXDNLA1KZ92 1463 aa22.02■■□□□ 1.12
SCARB1-208ENST00000544327 HMMRO75330 724 aa22.02■■□□□ 1.12
SCARB1-208ENST00000544327 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.12
SCARB1-208ENST00000544327 DDIT3P35638 169 aa22.01■■□□□ 1.11
SCARB1-208ENST00000544327 IL17REQ8NFR9 667 aa22.01■■□□□ 1.11
SCARB1-208ENST00000544327 TAF7Q15545 349 aaPredicted RBP22■■□□□ 1.11
SCARB1-208ENST00000544327 CEMIPQ8WUJ3 1361 aa21.99■■□□□ 1.11
SCARB1-208ENST00000544327 SETD1BQ9UPS6 1966 aaKnown RBP21.99■■□□□ 1.11
SCARB1-208ENST00000544327 FLIIQ13045 1269 aa21.98■■□□□ 1.11
SCARB1-208ENST00000544327 LMO7Q8WWI1 1683 aa21.97■■□□□ 1.11
SCARB1-208ENST00000544327 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
SCARB1-208ENST00000544327 KCNH5Q8NCM2 988 aa21.97■■□□□ 1.11
SCARB1-208ENST00000544327 F6X3S4 739 aa21.96■■□□□ 1.11
SCARB1-208ENST00000544327 GNAI2P04899 355 aa21.96■■□□□ 1.11
SCARB1-208ENST00000544327 CIZ1Q9ULV3 898 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-208ENST00000544327 SLIT3O75094 1523 aa21.96■■□□□ 1.11
SCARB1-208ENST00000544327 KDM3BQ7LBC6 1761 aa21.96■■□□□ 1.11
SCARB1-208ENST00000544327 NCAPD2Q15021 1401 aa21.96■■□□□ 1.11
SCARB1-208ENST00000544327 C16orf71Q8IYS4 520 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-208ENST00000544327 OSBPL3Q9H4L5 887 aa21.96■■□□□ 1.11
SCARB1-208ENST00000544327 NPHP4O75161 1426 aaPredicted RBP21.95■■□□□ 1.1
SCARB1-208ENST00000544327 GNAI3P08754 354 aa21.95■■□□□ 1.1
SCARB1-208ENST00000544327 MCM4P33991 863 aa21.94■■□□□ 1.1
SCARB1-208ENST00000544327 SLC4A10Q6U841 1118 aa21.94■■□□□ 1.1
SCARB1-208ENST00000544327 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
SCARB1-208ENST00000544327 SPRYD3Q8NCJ5 442 aa21.94■■□□□ 1.1
SCARB1-208ENST00000544327 OTUD7AQ8TE49 926 aaPredicted RBP21.93■■□□□ 1.1
SCARB1-208ENST00000544327 HOXB7P09629 217 aa21.92■■□□□ 1.1
SCARB1-208ENST00000544327 PSME1Q06323 249 aa21.92■■□□□ 1.1
SCARB1-208ENST00000544327 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
SCARB1-208ENST00000544327 CAMTA1Q9Y6Y1 1673 aa21.92■■□□□ 1.1
SCARB1-208ENST00000544327 FKBP5Q13451 457 aaPredicted RBP21.92■■□□□ 1.1
SCARB1-208ENST00000544327 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms