RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 POLR3GLQ9BT43 218 aa22.65■■□□□ 1.22
SPPL3-207ENST00000543608 FLT4P35916 1363 aa22.64■■□□□ 1.22
SPPL3-207ENST00000543608 INSRP06213 1382 aa22.63■■□□□ 1.21
SPPL3-207ENST00000543608 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
SPPL3-207ENST00000543608 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
SPPL3-207ENST00000543608 ZCRB1Q8TBF4 217 aaKnown RBP22.62■■□□□ 1.21
SPPL3-207ENST00000543608 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
SPPL3-207ENST00000543608 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
SPPL3-207ENST00000543608 LRRC4BQ9NT99 713 aa22.61■■□□□ 1.21
SPPL3-207ENST00000543608 NSD2O96028 1365 aa22.61■■□□□ 1.21
SPPL3-207ENST00000543608 ZNF827Q17R98 1081 aa22.6■■□□□ 1.21
SPPL3-207ENST00000543608 PRIM1P49642 420 aaKnown RBP22.59■■□□□ 1.21
SPPL3-207ENST00000543608 ATF5Q9Y2D1 282 aaPredicted RBP22.59■■□□□ 1.21
SPPL3-207ENST00000543608 KIF24Q5T7B8 1368 aa22.59■■□□□ 1.21
SPPL3-207ENST00000543608 MAP2P11137 1827 aaKnown RBP22.59■■□□□ 1.21
SPPL3-207ENST00000543608 LY75O60449 1722 aa22.58■■□□□ 1.21
SPPL3-207ENST00000543608 HSPA5P11021 654 aaKnown RBP22.58■■□□□ 1.21
SPPL3-207ENST00000543608 RAPGEF4Q8WZA2 1011 aa22.58■■□□□ 1.21
SPPL3-207ENST00000543608 TUBGCP6Q96RT7 1819 aa22.58■■□□□ 1.21
SPPL3-207ENST00000543608 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
SPPL3-207ENST00000543608 PTGER2P43116 358 aa22.57■■□□□ 1.2
SPPL3-207ENST00000543608 KCNQ4P56696 695 aa22.57■■□□□ 1.2
SPPL3-207ENST00000543608 TATP17735 454 aaPredicted RBP22.56■■□□□ 1.2
SPPL3-207ENST00000543608 CGNL1Q0VF96 1302 aa22.56■■□□□ 1.2
SPPL3-207ENST00000543608 PKD1L3Q7Z443 1732 aa22.55■■□□□ 1.2
SPPL3-207ENST00000543608 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.22e-6■■■■■ 26.9
SPPL3-207ENST00000543608 TOGARAM1Q9Y4F4 1720 aa22.54■■□□□ 1.2
SPPL3-207ENST00000543608 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
SPPL3-207ENST00000543608 MTFR1LQ9H019 292 aa22.53■■□□□ 1.2
SPPL3-207ENST00000543608 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
SPPL3-207ENST00000543608 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
SPPL3-207ENST00000543608 NCAPD2Q15021 1401 aa22.51■■□□□ 1.19
SPPL3-207ENST00000543608 TNNT2P45379 298 aaPredicted RBP22.51■■□□□ 1.19
SPPL3-207ENST00000543608 SLC27A3Q5K4L6 730 aa22.51■■□□□ 1.19
SPPL3-207ENST00000543608 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
SPPL3-207ENST00000543608 SGIP1Q9BQI5 828 aa22.49■■□□□ 1.19
SPPL3-207ENST00000543608 ITGB4P16144 1822 aa22.49■■□□□ 1.19
SPPL3-207ENST00000543608 WASHC2AQ641Q2 1341 aa22.49■■□□□ 1.19
SPPL3-207ENST00000543608 CYP27B1O15528 508 aa22.48■■□□□ 1.19
SPPL3-207ENST00000543608 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
SPPL3-207ENST00000543608 PNPLA7Q6ZV29 1317 aa22.48■■□□□ 1.19
SPPL3-207ENST00000543608 PANK3Q9H999 370 aa22.47■■□□□ 1.19
SPPL3-207ENST00000543608 CCNL1Q9UK58 526 aaPredicted RBP22.47■■□□□ 1.19
SPPL3-207ENST00000543608 C5P01031 1676 aa22.46■■□□□ 1.19
SPPL3-207ENST00000543608 FHDC1Q9C0D6 1143 aaPredicted RBP22.46■■□□□ 1.19
SPPL3-207ENST00000543608 EYA1Q99502 592 aa22.45■■□□□ 1.18
SPPL3-207ENST00000543608 MPRIPQ6WCQ1 1025 aa22.44■■□□□ 1.18
SPPL3-207ENST00000543608 TFCP2L1Q9NZI6 479 aa22.44■■□□□ 1.18
SPPL3-207ENST00000543608 TAF1LQ8IZX4 1826 aa22.43■■□□□ 1.18
SPPL3-207ENST00000543608 COL24A1Q17RW2 1714 aa22.43■■□□□ 1.18
SPPL3-207ENST00000543608 EIF4A2Q14240 407 aaKnown RBP22.42■■□□□ 1.18
SPPL3-207ENST00000543608 ARXQ96QS3 562 aa22.42■■□□□ 1.18
SPPL3-207ENST00000543608 SYT17Q9BSW7 474 aa22.42■■□□□ 1.18
SPPL3-207ENST00000543608 PALLDQ8WX93 1383 aa22.41■■□□□ 1.18
SPPL3-207ENST00000543608 DCAF8L1A6NGE4 600 aa22.4■■□□□ 1.18
SPPL3-207ENST00000543608 YY1P25490 414 aa22.4■■□□□ 1.18
SPPL3-207ENST00000543608 SPG7Q9UQ90 795 aa22.39■■□□□ 1.17
SPPL3-207ENST00000543608 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
SPPL3-207ENST00000543608 SLC16A10Q8TF71 515 aa22.36■■□□□ 1.17
SPPL3-207ENST00000543608 PIGBQ92521 554 aa22.36■■□□□ 1.17
SPPL3-207ENST00000543608 C4BP0C0L5 1744 aa22.36■■□□□ 1.17
SPPL3-207ENST00000543608 UTRNP46939 3433 aa22.36■■□□□ 1.17
SPPL3-207ENST00000543608 IGSF1Q8N6C5 1336 aa22.35■■□□□ 1.17
SPPL3-207ENST00000543608 MSH5O43196 834 aa22.35■■□□□ 1.17
SPPL3-207ENST00000543608 NKX1-1Q15270 411 aaPredicted RBP22.35■■□□□ 1.17
SPPL3-207ENST00000543608 PHKG2P15735 406 aa22.34■■□□□ 1.17
SPPL3-207ENST00000543608 MORC1Q86VD1 984 aa22.34■■□□□ 1.17
SPPL3-207ENST00000543608 COL23A1Q86Y22 540 aaPredicted RBP22.34■■□□□ 1.17
SPPL3-207ENST00000543608 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
SPPL3-207ENST00000543608 KIF7Q2M1P5 1343 aa22.33■■□□□ 1.17
SPPL3-207ENST00000543608 POLD1P28340 1107 aa22.33■■□□□ 1.17
SPPL3-207ENST00000543608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.33■■□□□ 1.17
SPPL3-207ENST00000543608 UBR3Q6ZT12 1888 aa22.32■■□□□ 1.16
SPPL3-207ENST00000543608 MSL1Q68DK7 614 aa22.31■■□□□ 1.16
SPPL3-207ENST00000543608 IFNL2Q8IZJ0 200 aa22.31■■□□□ 1.16
SPPL3-207ENST00000543608 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
SPPL3-207ENST00000543608 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
SPPL3-207ENST00000543608 KNSTRNQ9Y448 316 aa22.31■■□□□ 1.16
SPPL3-207ENST00000543608 AMIGO3Q86WK7 504 aa22.3■■□□□ 1.16
SPPL3-207ENST00000543608 AEBP1Q8IUX7 1158 aa22.29■■□□□ 1.16
SPPL3-207ENST00000543608 SMIM5Q71RC9 77 aa22.28■■□□□ 1.16
SPPL3-207ENST00000543608 ASAP1Q9ULH1 1129 aa22.28■■□□□ 1.16
SPPL3-207ENST00000543608 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
SPPL3-207ENST00000543608 NLGN2Q8NFZ4 835 aa22.27■■□□□ 1.16
SPPL3-207ENST00000543608 AK7Q96M32 723 aa22.27■■□□□ 1.16
SPPL3-207ENST00000543608 PLEKHG2Q9H7P9 1386 aa22.26■■□□□ 1.15
SPPL3-207ENST00000543608 CHD4Q14839 1912 aa22.26■■□□□ 1.15
SPPL3-207ENST00000543608 LOC102724428A0A0B4J2F2 783 aa22.26■■□□□ 1.15
SPPL3-207ENST00000543608 SIK1P57059 783 aa22.26■■□□□ 1.15
SPPL3-207ENST00000543608 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
SPPL3-207ENST00000543608 KDM6AO15550 1401 aaPredicted RBP22.25■■□□□ 1.15
SPPL3-207ENST00000543608 PHF14O94880 888 aa22.25■■□□□ 1.15
SPPL3-207ENST00000543608 ITPK1Q13572 414 aa22.24■■□□□ 1.15
SPPL3-207ENST00000543608 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
SPPL3-207ENST00000543608 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
SPPL3-207ENST00000543608 GPR162Q16538 588 aa22.22■■□□□ 1.15
SPPL3-207ENST00000543608 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
SPPL3-207ENST00000543608 SULT6B1Q6IMI4 303 aa22.22■■□□□ 1.15
SPPL3-207ENST00000543608 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
SPPL3-207ENST00000543608 KDRP35968 1356 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms