RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
CACNA2D4-216ENST00000543405 ADCY9O60503 1353 aa17.7■□□□□ 0.42
CACNA2D4-216ENST00000543405 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
CACNA2D4-216ENST00000543405 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
CACNA2D4-216ENST00000543405 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
CACNA2D4-216ENST00000543405 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-216ENST00000543405 IP6K1Q92551 441 aa17.68■□□□□ 0.42
CACNA2D4-216ENST00000543405 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
CACNA2D4-216ENST00000543405 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
CACNA2D4-216ENST00000543405 MEGF6O75095 1541 aa17.67■□□□□ 0.42
CACNA2D4-216ENST00000543405 PRIM1P49642 420 aaKnown RBP17.66■□□□□ 0.42
CACNA2D4-216ENST00000543405 HDGFL2Q7Z4V5 671 aaPredicted RBP17.66■□□□□ 0.42
CACNA2D4-216ENST00000543405 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
CACNA2D4-216ENST00000543405 SLC12A5Q9H2X9 1139 aa17.66■□□□□ 0.42
CACNA2D4-216ENST00000543405 HSPA6P17066 643 aa17.65■□□□□ 0.42
CACNA2D4-216ENST00000543405 MSL1Q68DK7 614 aa17.65■□□□□ 0.42
CACNA2D4-216ENST00000543405 COL23A1Q86Y22 540 aaPredicted RBP17.65■□□□□ 0.42
CACNA2D4-216ENST00000543405 GPBP1L1Q9HC44 474 aaPredicted RBP17.65■□□□□ 0.42
CACNA2D4-216ENST00000543405 C5P01031 1676 aa17.64■□□□□ 0.42
CACNA2D4-216ENST00000543405 TMC1Q8TDI8 760 aa17.64■□□□□ 0.41
CACNA2D4-216ENST00000543405 CCNL1Q9UK58 526 aaPredicted RBP17.64■□□□□ 0.41
CACNA2D4-216ENST00000543405 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
CACNA2D4-216ENST00000543405 MSH5O43196 834 aa17.62■□□□□ 0.41
CACNA2D4-216ENST00000543405 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
CACNA2D4-216ENST00000543405 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
CACNA2D4-216ENST00000543405 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
CACNA2D4-216ENST00000543405 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
CACNA2D4-216ENST00000543405 TAF1LQ8IZX4 1826 aa17.62■□□□□ 0.41
CACNA2D4-216ENST00000543405 HOXC9P31274 260 aa17.61■□□□□ 0.41
CACNA2D4-216ENST00000543405 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
CACNA2D4-216ENST00000543405 TOGARAM1Q9Y4F4 1720 aa17.59■□□□□ 0.41
CACNA2D4-216ENST00000543405 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
CACNA2D4-216ENST00000543405 USP47Q96K76 1375 aa17.59■□□□□ 0.41
CACNA2D4-216ENST00000543405 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
CACNA2D4-216ENST00000543405 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
CACNA2D4-216ENST00000543405 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
CACNA2D4-216ENST00000543405 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
CACNA2D4-216ENST00000543405 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
CACNA2D4-216ENST00000543405 FBLN1P23142 703 aa17.55■□□□□ 0.4
CACNA2D4-216ENST00000543405 COG3Q96JB2 828 aa17.55■□□□□ 0.4
CACNA2D4-216ENST00000543405 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
CACNA2D4-216ENST00000543405 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
CACNA2D4-216ENST00000543405 KIF3CO14782 793 aa17.54■□□□□ 0.4
CACNA2D4-216ENST00000543405 AMPHP49418 695 aa17.54■□□□□ 0.4
CACNA2D4-216ENST00000543405 NBPF6Q5VWK0 638 aa17.54■□□□□ 0.4
CACNA2D4-216ENST00000543405 NBPF4Q96M43 638 aa17.54■□□□□ 0.4
CACNA2D4-216ENST00000543405 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
CACNA2D4-216ENST00000543405 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
CACNA2D4-216ENST00000543405 AMIGO3Q86WK7 504 aa17.53■□□□□ 0.4
CACNA2D4-216ENST00000543405 TESK2Q96S53 571 aa17.53■□□□□ 0.4
CACNA2D4-216ENST00000543405 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
CACNA2D4-216ENST00000543405 ITGB4P16144 1822 aa17.52■□□□□ 0.4
CACNA2D4-216ENST00000543405 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.39
CACNA2D4-216ENST00000543405 USHBP1Q8N6Y0 703 aa17.51■□□□□ 0.39
CACNA2D4-216ENST00000543405 FLAD1Q8NFF5 587 aa17.51■□□□□ 0.39
CACNA2D4-216ENST00000543405 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-216ENST00000543405 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
CACNA2D4-216ENST00000543405 PCDH11YQ9BZA8 1340 aa17.49■□□□□ 0.39
CACNA2D4-216ENST00000543405 SMG6Q86US8 1419 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-216ENST00000543405 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-216ENST00000543405 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
CACNA2D4-216ENST00000543405 INSRP06213 1382 aa17.48■□□□□ 0.39
CACNA2D4-216ENST00000543405 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
CACNA2D4-216ENST00000543405 KIF20BQ96Q89 1820 aa17.47■□□□□ 0.39
CACNA2D4-216ENST00000543405 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
CACNA2D4-216ENST00000543405 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
CACNA2D4-216ENST00000543405 CYP27B1O15528 508 aa17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 PHF14O94880 888 aa17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 APLP1P51693 650 aa17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 AK7Q96M32 723 aa17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
CACNA2D4-216ENST00000543405 KIF24Q5T7B8 1368 aa17.45■□□□□ 0.38
CACNA2D4-216ENST00000543405 FYB1O15117 783 aa17.45■□□□□ 0.38
CACNA2D4-216ENST00000543405 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 FLT4P35916 1363 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 ST20-MTHFSA0A0A6YYL1 179 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 DNAJC5GQ8N7S2 189 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
CACNA2D4-216ENST00000543405 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
CACNA2D4-216ENST00000543405 SMARCC1Q92922 1105 aaPredicted RBP17.43■□□□□ 0.38
CACNA2D4-216ENST00000543405 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
CACNA2D4-216ENST00000543405 WDR90Q96KV7 1748 aa17.43■□□□□ 0.38
CACNA2D4-216ENST00000543405 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
CACNA2D4-216ENST00000543405 SSFA2P28290 1259 aa17.41■□□□□ 0.38
CACNA2D4-216ENST00000543405 PIGBQ92521 554 aa17.41■□□□□ 0.38
CACNA2D4-216ENST00000543405 SLC24A1O60721 1099 aa17.4■□□□□ 0.38
CACNA2D4-216ENST00000543405 TOMM70O94826 608 aa17.4■□□□□ 0.38
CACNA2D4-216ENST00000543405 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
CACNA2D4-216ENST00000543405 LINC00116Q8NCU8 138 aa17.4■□□□□ 0.38
CACNA2D4-216ENST00000543405 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
CACNA2D4-216ENST00000543405 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
CACNA2D4-216ENST00000543405 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
CACNA2D4-216ENST00000543405 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
CACNA2D4-216ENST00000543405 SIK1P57059 783 aa17.37■□□□□ 0.37
CACNA2D4-216ENST00000543405 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms