RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	TAF1L	Q8IZX4	1826 aa		9.7	□□□□□ -0.86
GTF2H3-212	ENST00000543341	ONECUT3	O60422	494 aa	Predicted RBP	9.69	□□□□□ -0.86
GTF2H3-212	ENST00000543341	NOP58	Q9Y2X3	529 aa	Known RBP	9.69	□□□□□ -0.86
GTF2H3-212	ENST00000543341	CACNA1F	O60840	1977 aa		9.69	□□□□□ -0.86
GTF2H3-212	ENST00000543341	DIAPH1	O60610	1272 aa	Known RBP	9.69	□□□□□ -0.86
GTF2H3-212	ENST00000543341	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.69	□□□□□ -0.86	4e-9	■■■■■ 35
GTF2H3-212	ENST00000543341	ADAMTS8	Q9UP79	889 aa		9.69	□□□□□ -0.86
GTF2H3-212	ENST00000543341	KCP	Q6ZWJ8	1503 aa		9.69	□□□□□ -0.86
GTF2H3-212	ENST00000543341	EYA1	Q99502	592 aa		9.68	□□□□□ -0.86
GTF2H3-212	ENST00000543341	ZBED9	Q6R2W3	1325 aa		9.68	□□□□□ -0.86
GTF2H3-212	ENST00000543341	CARD10	Q9BWT7	1032 aa		9.68	□□□□□ -0.86
GTF2H3-212	ENST00000543341	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.68	□□□□□ -0.86
GTF2H3-212	ENST00000543341	KDM6A	O15550	1401 aa	Predicted RBP	9.68	□□□□□ -0.86
GTF2H3-212	ENST00000543341	SPATA31A5	Q5VU36	1347 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	SPATA31A7	Q8IWB4	1347 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	THRAP3	Q9Y2W1	955 aa	Known RBP	9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	BARGIN	Q6ZT62	677 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	BTAF1	O14981	1849 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	NUP188	Q5SRE5	1749 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	NBPF6	Q5VWK0	638 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	NBPF4	Q96M43	638 aa		9.67	□□□□□ -0.86
GTF2H3-212	ENST00000543341	SPATA31A1	Q5TZJ5	1347 aa		9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	NPM2	Q86SE8	214 aa	Known RBP	9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	CCDC136	Q96JN2	1154 aa		9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	NKX1-1	Q15270	411 aa	Predicted RBP	9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	CFAP53	Q96M91	514 aa		9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	HEG1	Q9ULI3	1381 aa		9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	CABLES1	Q8TDN4	633 aa		9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	SALL2	Q9Y467	1007 aa	Predicted RBP	9.66	□□□□□ -0.86
GTF2H3-212	ENST00000543341	PAK3	O75914	559 aa	Predicted RBP	9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	VPS72	Q15906	364 aa		9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	ANKRD24	Q8TF21	1146 aa		9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	RUNDC1	Q96C34	613 aa		9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	IL16	Q14005	1332 aa		9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	BCOR	Q6W2J9	1755 aa		9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	TRIM35	Q9UPQ4	493 aa		9.65	□□□□□ -0.86
GTF2H3-212	ENST00000543341	HTATSF1	O43719	755 aa	Known RBP	9.64	□□□□□ -0.87
GTF2H3-212	ENST00000543341	NUTM2G	Q5VZR2	741 aa		9.64	□□□□□ -0.87
GTF2H3-212	ENST00000543341	ERICH6B	Q5W0A0	696 aa		9.64	□□□□□ -0.87
GTF2H3-212	ENST00000543341	ZNF853	P0CG23	659 aa		9.64	□□□□□ -0.87
GTF2H3-212	ENST00000543341	TUBGCP6	Q96RT7	1819 aa		9.62	□□□□□ -0.87
GTF2H3-212	ENST00000543341	AEBP1	Q8IUX7	1158 aa		9.62	□□□□□ -0.87
GTF2H3-212	ENST00000543341	UNC5CL	Q8IV45	518 aa		9.62	□□□□□ -0.87
GTF2H3-212	ENST00000543341	PHACTR3	Q96KR7	559 aa		9.62	□□□□□ -0.87
GTF2H3-212	ENST00000543341	PIP4K2B	P78356	416 aa		9.61	□□□□□ -0.87
GTF2H3-212	ENST00000543341	MAP3K5	Q99683	1374 aa		9.61	□□□□□ -0.87
GTF2H3-212	ENST00000543341	PNN	Q9H307	717 aa	Known RBP	9.61	□□□□□ -0.87
GTF2H3-212	ENST00000543341	BABAM1	Q9NWV8	329 aa		9.61	□□□□□ -0.87
GTF2H3-212	ENST00000543341	CASZ1	Q86V15	1759 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	AMPH	P49418	695 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	NFE2L2	Q16236	605 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	NUDC	Q9Y266	331 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	ANKRD36C	Q5JPF3	1778 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	TMPO	P42166	694 aa	Known RBP	9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	WDR63	Q8IWG1	891 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	RNF123	Q5XPI4	1314 aa		9.6	□□□□□ -0.87
GTF2H3-212	ENST00000543341	TNNT2	P45379	298 aa	Predicted RBP	9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	RGS17	Q9UGC6	210 aa	Predicted RBP	9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	SCN7A	Q01118	1682 aa		9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	ZC3H6	P61129	1189 aa	Known RBP	9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	LARP1	Q6PKG0	1096 aa	Known RBP	9.59	□□□□□ -0.87
GTF2H3-212	ENST00000543341	RGS12	O14924	1447 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	C4A	P0C0L4	1744 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	C4B	P0C0L5	1744 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PDE3B	Q13370	1112 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	AMOT	Q4VCS5	1084 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	WWC1	Q8IX03	1113 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	BTG4	Q9NY30	223 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	TAOK2	Q9UL54	1235 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	MTHFSD	Q2M296	383 aa	Known RBP	9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PRDM11	Q9NQV5	511 aa		9.58	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PRKAR2B	P31323	418 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	CHRNA2	Q15822	529 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	SULT6B1	Q6IMI4	303 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	TCP11L2	Q8N4U5	519 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	LAMB2	P55268	1798 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	ARFGEF2	Q9Y6D5	1785 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	UBR3	Q6ZT12	1888 aa		9.57	□□□□□ -0.88
GTF2H3-212	ENST00000543341	WDR43	Q15061	677 aa	Known RBP eCLIP	9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	AKAP4	Q5JQC9	854 aa		9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PCDH11X	Q9BZA7	1347 aa		9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PCDH11Y	Q9BZA8	1340 aa		9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	EIF5B	O60841	1220 aa	Known RBP	9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PHKG2	P15735	406 aa		9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	SLFN5	Q08AF3	891 aa		9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.56	□□□□□ -0.88
GTF2H3-212	ENST00000543341	SOS1	Q07889	1333 aa	Predicted RBP	9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	CYP27B1	O15528	508 aa		9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	IPO9	Q96P70	1041 aa	Known RBP	9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	AFF2	P51816	1311 aa		9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	U2AF1L5	P0DN76	240 aa	Predicted RBP	9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	BRPF1	P55201	1214 aa	Predicted RBP	9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	U2AF1	Q01081	240 aa	Known RBP eCLIP	9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	DUSP27	Q5VZP5	1158 aa		9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	GAS2L2	Q8NHY3	880 aa		9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	LAS1L	Q9Y4W2	734 aa	Known RBP	9.55	□□□□□ -0.88
GTF2H3-212	ENST00000543341	IL2RB	P14784	551 aa		9.54	□□□□□ -0.88
GTF2H3-212	ENST00000543341	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.54	□□□□□ -0.88

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms