RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
MDM2-230ENST00000543323 C21orf2O43822 256 aa9.12□□□□□ -0.95
MDM2-230ENST00000543323 ZPR1O75312 459 aa9.12□□□□□ -0.95
MDM2-230ENST00000543323 CCDC125Q86Z20 511 aa9.12□□□□□ -0.95
MDM2-230ENST00000543323 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
MDM2-230ENST00000543323 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
MDM2-230ENST00000543323 ANO2Q9NQ90 1003 aa9.12□□□□□ -0.95
MDM2-230ENST00000543323 ESPNB1AK53 854 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 M0R2N6 131 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 AGERQ15109 404 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 GTF3C2Q8WUA4 911 aaPredicted RBP9.11□□□□□ -0.95
MDM2-230ENST00000543323 BAP1Q92560 729 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 FOXJ1Q92949 421 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
MDM2-230ENST00000543323 WEE1P30291 646 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 ASB16Q96NS5 453 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 C1QTNF2Q9BXJ5 285 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 SEPT3Q9UH03 358 aa9.1□□□□□ -0.95
MDM2-230ENST00000543323 TCF3P15923 654 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 VAMP1P23763 118 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 MAPK1P28482 360 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 SF3B2Q13435 895 aaKnown RBP9.09□□□□□ -0.95
MDM2-230ENST00000543323 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 SLC6A16Q9GZN6 736 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 DCTN4Q9UJW0 460 aa9.09□□□□□ -0.95
MDM2-230ENST00000543323 DNMT3AQ9Y6K1 912 aaPredicted RBP9.09□□□□□ -0.95
MDM2-230ENST00000543323 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
MDM2-230ENST00000543323 LGR5O75473 907 aa9.08□□□□□ -0.96
MDM2-230ENST00000543323 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
MDM2-230ENST00000543323 ECM1Q16610 540 aa9.08□□□□□ -0.96
MDM2-230ENST00000543323 FBXO33Q7Z6M2 555 aa9.08□□□□□ -0.96
MDM2-230ENST00000543323 CDV3Q9UKY7 258 aaKnown RBP9.08□□□□□ -0.96
MDM2-230ENST00000543323 FKBP5Q13451 457 aaPredicted RBP9.07□□□□□ -0.96
MDM2-230ENST00000543323 NYAP1Q6ZVC0 841 aa9.07□□□□□ -0.96
MDM2-230ENST00000543323 ZSCAN29Q8IWY8 852 aaPredicted RBP9.07□□□□□ -0.96
MDM2-230ENST00000543323 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
MDM2-230ENST00000543323 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
MDM2-230ENST00000543323 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
MDM2-230ENST00000543323 ARHGAP4P98171 946 aa9.06□□□□□ -0.96
MDM2-230ENST00000543323 COL19A1Q14993 1142 aa9.06□□□□□ -0.96
MDM2-230ENST00000543323 MTRQ99707 1265 aa9.06□□□□□ -0.96
MDM2-230ENST00000543323 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
MDM2-230ENST00000543323 COL26A1Q96A83 441 aa9.05□□□□□ -0.96
MDM2-230ENST00000543323 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
MDM2-230ENST00000543323 CAPN12Q6ZSI9 719 aa9.04□□□□□ -0.96
MDM2-230ENST00000543323 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
MDM2-230ENST00000543323 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
MDM2-230ENST00000543323 TAGLNQ01995 201 aaKnown RBP9.03□□□□□ -0.96
MDM2-230ENST00000543323 POTEGQ6S5H5 508 aa9.03□□□□□ -0.96
MDM2-230ENST00000543323 RGL4Q8IZJ4 473 aa9.03□□□□□ -0.96
MDM2-230ENST00000543323 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
MDM2-230ENST00000543323 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
MDM2-230ENST00000543323 FOXO3O43524 673 aa9.02□□□□□ -0.97
MDM2-230ENST00000543323 IGFBP4P22692 258 aa9.02□□□□□ -0.97
MDM2-230ENST00000543323 CDAN1Q8IWY9 1227 aa9.02□□□□□ -0.97
MDM2-230ENST00000543323 KCTD12Q96CX2 325 aaKnown RBP9.02□□□□□ -0.97
MDM2-230ENST00000543323 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
MDM2-230ENST00000543323 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
MDM2-230ENST00000543323 POTEMA6NI47 508 aa9.01□□□□□ -0.97
MDM2-230ENST00000543323 SH3BP2P78314 561 aa9.01□□□□□ -0.97
MDM2-230ENST00000543323 ZNF516Q92618 1163 aa9.01□□□□□ -0.97
MDM2-230ENST00000543323 KCTD15Q96SI1 283 aaPredicted RBP9.01□□□□□ -0.97
MDM2-230ENST00000543323 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
MDM2-230ENST00000543323 RECKO95980 971 aa9□□□□□ -0.97
MDM2-230ENST00000543323 NPR3P17342 541 aa9□□□□□ -0.97
MDM2-230ENST00000543323 RAB15P59190 212 aa9□□□□□ -0.97
MDM2-230ENST00000543323 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
MDM2-230ENST00000543323 TJAP1Q5JTD0 557 aa9□□□□□ -0.97
MDM2-230ENST00000543323 C8orf37Q96NL8 207 aa9□□□□□ -0.97
MDM2-230ENST00000543323 TMEM229AB2RXF0 380 aa8.99□□□□□ -0.97
MDM2-230ENST00000543323 FAM13AO94988 1023 aa8.99□□□□□ -0.97
MDM2-230ENST00000543323 S1PR4O95977 384 aa8.99□□□□□ -0.97
MDM2-230ENST00000543323 SCTRP47872 440 aa8.99□□□□□ -0.97
MDM2-230ENST00000543323 NAA30Q147X3 362 aaPredicted RBP8.99□□□□□ -0.97
MDM2-230ENST00000543323 INTS6LQ5JSJ4 861 aaKnown RBP8.98□□□□□ -0.97
MDM2-230ENST00000543323 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
MDM2-230ENST00000543323 RBCK1Q9BYM8 510 aa8.98□□□□□ -0.97
MDM2-230ENST00000543323 MAP4K5Q9Y4K4 846 aa8.98□□□□□ -0.97
MDM2-230ENST00000543323 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
MDM2-230ENST00000543323 WASLO00401 505 aaPredicted RBP8.97□□□□□ -0.97
MDM2-230ENST00000543323 BACH1O14867 736 aa8.97□□□□□ -0.97
MDM2-230ENST00000543323 ERVK-9P63128 1117 aa8.97□□□□□ -0.97
MDM2-230ENST00000543323 SCG3Q8WXD2 468 aaKnown RBP8.97□□□□□ -0.97
MDM2-230ENST00000543323 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
MDM2-230ENST00000543323 SCNN1DP51172 638 aa8.96□□□□□ -0.98
MDM2-230ENST00000543323 CC2D2BQ6DHV5 1058 aa8.96□□□□□ -0.98
MDM2-230ENST00000543323 ATAD2Q6PL18 1390 aa8.96□□□□□ -0.98
MDM2-230ENST00000543323 GDF10P55107 478 aa8.95□□□□□ -0.98
MDM2-230ENST00000543323 VASH1Q7L8A9 365 aaPredicted RBP8.95□□□□□ -0.98
MDM2-230ENST00000543323 TMC7Q7Z402 723 aa8.95□□□□□ -0.98
MDM2-230ENST00000543323 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
MDM2-230ENST00000543323 VTI1AQ96AJ9 217 aa8.95□□□□□ -0.98
MDM2-230ENST00000543323 NDUFB5O43674 189 aa8.94□□□□□ -0.98
MDM2-230ENST00000543323 P4HBP07237 508 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms