RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, humanhuman

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-204ENST00000543254 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
KLHL42-204ENST00000543254 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
KLHL42-204ENST00000543254 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
KLHL42-204ENST00000543254 BAG6P46379 1132 aa16.85■□□□□ 0.29
KLHL42-204ENST00000543254 HMOX1P09601 288 aa16.84■□□□□ 0.29
KLHL42-204ENST00000543254 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
KLHL42-204ENST00000543254 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
KLHL42-204ENST00000543254 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
KLHL42-204ENST00000543254 APBA3O96018 575 aa16.83■□□□□ 0.28
KLHL42-204ENST00000543254 AMOTQ4VCS5 1084 aa16.83■□□□□ 0.28
KLHL42-204ENST00000543254 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
KLHL42-204ENST00000543254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.83■□□□□ 0.28
KLHL42-204ENST00000543254 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
KLHL42-204ENST00000543254 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
KLHL42-204ENST00000543254 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
KLHL42-204ENST00000543254 SYTL4Q96C24 671 aaPredicted RBP16.82■□□□□ 0.28
KLHL42-204ENST00000543254 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
KLHL42-204ENST00000543254 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
KLHL42-204ENST00000543254 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
KLHL42-204ENST00000543254 BCL9O00512 1426 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 PLEKHG2Q9H7P9 1386 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 EP400Q96L91 3159 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 ANP32CO43423 234 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
KLHL42-204ENST00000543254 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
KLHL42-204ENST00000543254 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
KLHL42-204ENST00000543254 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
KLHL42-204ENST00000543254 KDRP35968 1356 aa16.78■□□□□ 0.28
KLHL42-204ENST00000543254 CYP27B1O15528 508 aa16.78■□□□□ 0.28
KLHL42-204ENST00000543254 KCNQ2O43526 872 aa16.77■□□□□ 0.28
KLHL42-204ENST00000543254 NEFMP07197 916 aa16.77■□□□□ 0.28
KLHL42-204ENST00000543254 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
KLHL42-204ENST00000543254 PHKG2P15735 406 aa16.77■□□□□ 0.28
KLHL42-204ENST00000543254 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
KLHL42-204ENST00000543254 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
KLHL42-204ENST00000543254 PRKAR2BP31323 418 aa16.75■□□□□ 0.27
KLHL42-204ENST00000543254 FCHSD2O94868 740 aa16.74■□□□□ 0.27
KLHL42-204ENST00000543254 WDR43Q15061 677 aaKnown RBP eCLIP16.74■□□□□ 0.27
KLHL42-204ENST00000543254 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
KLHL42-204ENST00000543254 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
KLHL42-204ENST00000543254 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
KLHL42-204ENST00000543254 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
KLHL42-204ENST00000543254 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
KLHL42-204ENST00000543254 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
KLHL42-204ENST00000543254 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
KLHL42-204ENST00000543254 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
KLHL42-204ENST00000543254 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
KLHL42-204ENST00000543254 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
KLHL42-204ENST00000543254 PLSCR1O15162 318 aa16.71■□□□□ 0.27
KLHL42-204ENST00000543254 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
KLHL42-204ENST00000543254 CAMKK2Q96RR4 588 aa16.71■□□□□ 0.27
KLHL42-204ENST00000543254 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
KLHL42-204ENST00000543254 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
KLHL42-204ENST00000543254 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
KLHL42-204ENST00000543254 CABP4P57796 275 aa16.69■□□□□ 0.26
KLHL42-204ENST00000543254 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
KLHL42-204ENST00000543254 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
KLHL42-204ENST00000543254 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
KLHL42-204ENST00000543254 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
KLHL42-204ENST00000543254 PHACTR3Q96KR7 559 aa16.67■□□□□ 0.26
KLHL42-204ENST00000543254 NHSQ6T4R5 1651 aa16.66■□□□□ 0.26
KLHL42-204ENST00000543254 TXNRD1Q16881 649 aa16.66■□□□□ 0.26
KLHL42-204ENST00000543254 PIGBQ92521 554 aa16.66■□□□□ 0.26
KLHL42-204ENST00000543254 RTF1Q92541 710 aaKnown RBP16.66■□□□□ 0.26
KLHL42-204ENST00000543254 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
KLHL42-204ENST00000543254 TNS1Q9HBL0 1735 aaKnown RBP16.66■□□□□ 0.26
KLHL42-204ENST00000543254 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
KLHL42-204ENST00000543254 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
KLHL42-204ENST00000543254 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
KLHL42-204ENST00000543254 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
KLHL42-204ENST00000543254 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
KLHL42-204ENST00000543254 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
KLHL42-204ENST00000543254 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
KLHL42-204ENST00000543254 TEFQ10587 303 aa16.63■□□□□ 0.25
KLHL42-204ENST00000543254 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
KLHL42-204ENST00000543254 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
KLHL42-204ENST00000543254 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
KLHL42-204ENST00000543254 HMGB2P26583 209 aaKnown RBP16.62■□□□□ 0.25
KLHL42-204ENST00000543254 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
KLHL42-204ENST00000543254 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
KLHL42-204ENST00000543254 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 PROM2Q8N271 834 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 ADAMTS8Q9UP79 889 aa16.61■□□□□ 0.25
KLHL42-204ENST00000543254 NFE2L2Q16236 605 aa16.6■□□□□ 0.25
KLHL42-204ENST00000543254 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
KLHL42-204ENST00000543254 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
KLHL42-204ENST00000543254 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
KLHL42-204ENST00000543254 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
KLHL42-204ENST00000543254 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
KLHL42-204ENST00000543254 BTAF1O14981 1849 aa16.59■□□□□ 0.25
KLHL42-204ENST00000543254 PSDA5PKW4 1024 aaPredicted RBP16.58■□□□□ 0.24
KLHL42-204ENST00000543254 KCNQ4P56696 695 aa16.58■□□□□ 0.24
KLHL42-204ENST00000543254 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 SIK1P57059 783 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms